Gene

KWMTBOMO08468

Pre Gene Modal

BGIBMGA009425

Annotation

PREDICTED:_brain_tumor_protein_[Bombyx_mori]

Location

Bomo_Chr14(+):10360747-10363468      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.446 Nuclear   Reliability : 1.502

CDS

ATGGCCTCACGCACCCCGTCCCTTGAGTCGCTGCCCGGTGCCAACTCAATAGGTTCGCTGGAGCGTGGCTCCATATCGCCCCTCACTCTCAGCGGTTCATCACCCCCTGCGAGCGACTCCGCCGTATGTGATTTACGCGACTTCGACGGACTCGATACCACTTGCGCCATCTGCCGTGAGACATTCATCGACCCCAAAGTACTTAACTGCTTTCATACTTTTTGCCGGGCTTGCCTGGACAGAGAACAGACCCACCCGGACAGAGTAACGTGCGTTACTTGTCGTGTTGACACTCAATTGCCACCCGGTGGTGTTGACAGCCTTCTTACGAATTTAGTGATCGCCGCTGCTGTCGACCAAGACGCTGAGCTGCTCTCATCTGGGCGACAGACAAGCTCTCCCTTGGCTCGTTGCACCGGCTGCAAGTCCAAGGAATCTGACGCCGTAGCGCGTTGTGTTGATTGCGCAAACTACCTCTGCCCCAACTGCGTCATGGCACACCAATTCATGCATTGCTTCGAAGGCCATCGAGTTCTTGCATTCACCGACATGAAAGACGACAAAGGCATACTGGGGACTACTATTACGACAAGCGGAGAGAAAACCGCATTCTGCCCAAGACACAAAAATGACATCTTGAAGTATTACTGCCGTACGTGCTCCGTGCCGGTGTGCAAGGAATGCACCATTATAGAGCATCCAGCGGCTCTGCACGACTGCGAGCATCTCTCTGACGCCGGTCCCAAACAGTTGGAGCTCATGCAGCAAGCGGTAAACGAAGCTAAGACCCGCGCAACTGAAATAAGGCACGTGGTCAAGACAGTAGAGCACGCCGCTGGAAAATTACAAGTTCAGTATCACAAGGCACAGAATGAGATAAACGACACTTTCCAGTTCTATCGCTCCATGTTGGAAGAACGAAAACAAGAACTGCTAAAAGAGCTAGAAAGTGTATTTTCTACCAAACAAATTGCCCTGACAGTGGTTGGACAAAAGGCGCAGGAAACTGTAGATAAGATTTATCAGACATGCGACTTTGTCGAGAAACTGACGAAATGCGCCAACATCGCTGAGATCCTTATGTTCAGGAAACTTCTCGATACCAAACTGCAATCCTTGATGAGCTCTAACCCCGAACAAAGCGTACAGACAGCATGCGAACTGGAATTTGTTTCCAACTACCAAGCCATCCAGGTAGGTGTACGAAACACTTTCGGGTACGTACGCTCAAGCTCAGAAGCAAACGTCGGTCCGACTAAACAACCACCGATCGCTCGTCCAACAAACGGATCCCTGTTGAATGGAGGCTCATCATCCAGCAGCAGCAGCGTGAACGGAAGCTCTGGAAGCTTGAACGGTGGCATTCATCTACCTACCGGTTTGAACGGAGTTCTGGATCGTCCATTTACTAATGGGCTTCTAGGGCCTACTAGCCAGTCTACTTCGCCATTCGAATCTAATTTGATTTCAAAACGATTCAACAGCGTCAACAGCCTCGGGCCTTTCTCTGCTGCTATCGGAGATATGAATCTAAACGGAATTAATCCATACGAAAAATGGTCCAACGGTGGTTGTGATGCCCTGTTTCCACCAACCACAACTGACCCATACTCACTGACTGCTGTGGCACATACCGATCCTCTGCTAGACCTAACAAACAAATTGATTTCCACTGCTATGTTCCCGCCTAAATCTCAAATCAAGCGCCAAAAAATGATTTACCATTGCAAATTCGGAGAGTTTGGCGTTATGGAAGGCCAATTCACGGAACCCAGCGGTGTCGCGGTCAATGCTCAGAACGATATCATTGTTGCCGATACAAACAACCACCGCATTCAGATCTTCGACAAAGAAGGTCGTTTCAAATTCCAATTCGGGGAATGCGGCAAGCGTGACGGCCAGTTACTGTATCCTAACCGCGTCGCTGTTGTTCGCACATCAGGAGACATAATTGTGACAGAACGATCGCCAACACACCAGATCCAGATCTATAACCAATACGGGCAGTTTGTACGCAAATTCGGGGCAAACATCTTGCAACATCCCCGCGGAGTCACCGTCGACAACAAGGGCCGTATCGTTGTCGTCGAATGCAAAGTAATGCGGGTTATCATTTTCGATCAAGTGGGCAACGTACTACAGAAGTTTGGCTGCTCTAAGCACTTGGAATTCCCCAACGGCGTCGTCGTTAATGATAAGCAGGAGATTTTCATCAGTGACAATCGCGCACATTGCGTCAAAGTATTCAATTATGACGGCATTTACTTGCGTCAGATCGGGGGCGAAGGTGTCACCAATTATCCGATCGGCGTTGGCATCAACGCAGCTGGTGAGATCTTGATCGCCGATAACCACAACAACTTCAATCTGACGATCTTCACGCAGGAGGGCCAACTCGTATCTGCCCTCGAAAGTAAGGTCAAACACGCTCAATGCTTCGACGTAGCGCTCATGGACGACGGCTCAGTTGTACTTGCGAGCAAGGACTACCGGCTGTACATCTACCGCTACGTACAAGTGCCCCCAATAGGCATGTGA

Protein

MASRTPSLESLPGANSIGSLERGSISPLTLSGSSPPASDSAVCDLRDFDGLDTTCAICRETFIDPKVLNCFHTFCRACLDREQTHPDRVTCVTCRVDTQLPPGGVDSLLTNLVIAAAVDQDAELLSSGRQTSSPLARCTGCKSKESDAVARCVDCANYLCPNCVMAHQFMHCFEGHRVLAFTDMKDDKGILGTTITTSGEKTAFCPRHKNDILKYYCRTCSVPVCKECTIIEHPAALHDCEHLSDAGPKQLELMQQAVNEAKTRATEIRHVVKTVEHAAGKLQVQYHKAQNEINDTFQFYRSMLEERKQELLKELESVFSTKQIALTVVGQKAQETVDKIYQTCDFVEKLTKCANIAEILMFRKLLDTKLQSLMSSNPEQSVQTACELEFVSNYQAIQVGVRNTFGYVRSSSEANVGPTKQPPIARPTNGSLLNGGSSSSSSSVNGSSGSLNGGIHLPTGLNGVLDRPFTNGLLGPTSQSTSPFESNLISKRFNSVNSLGPFSAAIGDMNLNGINPYEKWSNGGCDALFPPTTTDPYSLTAVAHTDPLLDLTNKLISTAMFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQIQIYNQYGQFVRKFGANILQHPRGVTVDNKGRIVVVECKVMRVIIFDQVGNVLQKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYDGIYLRQIGGEGVTNYPIGVGINAAGEILIADNHNNFNLTIFTQEGQLVSALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQVPPIGM

Uniprot

H9JIS4   A0A2A4JPN7   A0A2H1VUN1   A0A212EU52   A0A3S2P147   A0A0N1PJZ9   + More
A0A194Q7Q1   A0A0L7LN57   A0A1E1WUQ7   D2A0S0   A0A1W4WQF3   A0A1B6CC71   A0A1Y1LDM3   A0A2J7PZH7   N6TP29   U4UF78   A0A146M6Y2   A0A0A9WQ39   A0A0K8SLN2   A0A2R7W009   A0A1B6FGV4   A0A1B6LT16   A0A1B6K8W8   A0A0C9RSX1   T1HT84   A0A0L7QW79   A0A023F3H9   A0A2S2Q7T9   E0VBI3   A0A154PQ78   J9K3A6   A0A2H8TMT5   A0A2S2PU95   A0A310SS56   A0A0M8ZRW1   A0A2A3E193   A0A087ZVR7   K7ISI8   A0A067RBK6   A0A026WPE3   A0A3L8DXV6   A0A158NVB9   A0A3Q0JLM8   A0A0J7KYR9   A0A195F2S3   T1IPK5   A0A195C8Q6   A0A087T8B3   A0A2P6KUR7   A0A444SEJ3   A0A1S3JML1   A0A151XJG5   A0A1B0CY34   A0A1E1XEA0   L7MIF0   R7VKA8   A0A2R5LGZ1   A0A293M5D9   K1PZL0   A0A2P6KT45   A0A210PHL4   A0A336MNA1   A0A1Q3EVJ9   A0A195BFK9   Q17BL6   A0A2H5BFB6   B0XCV6   A0A195EKS6   A0A0L8HCK1   A0A182H4D2   E9I8W7   V4CDL6   E2ATR8   E2C9S7   A0A3S3PEW7   A0A443SQ59   Q7PMI8   A0A162SFW8   A0A0P6BLM7   A0A0P5VB53   A0A1J1ILX8   A0A0P5LTT3   A0A087T3M3   A0A0P6H0B1   A0A0P5F121   E9FRJ8   A0A077Z4J3   A0A1A9XL02   A0A1I8MJ76   L0PRP0   A0A1I8PSJ1   W8AGV2   A0A1B0FEZ7   A0A1B0A544   A0A0L0BQN3   A0A1A9W051   A0A0A1WSI9  

Pubmed

19121390    22118469    26354079    26227816    18362917    19820115    + More
28004739    23537049    26823975    25401762    25474469    20566863    20075255    24845553    24508170    30249741    21347285    28503490    25576852    23254933    22992520    28812685    17510324    29228898    26483478    21282665    20798317    12364791    21292972    25315136    24495485    26108605    25830018   

EMBL

BABH01033002    NWSH01000871    PCG73779.1    ODYU01004547    SOQ44551.1    AGBW02012456    + More
OWR45023.1    RSAL01000059    RVE49699.1    KQ460144    KPJ17459.1    KQ459337    KPJ01419.1    JTDY01000504    KOB76865.1    GDQN01000336    JAT90718.1    KQ971338    EFA02902.1    GEDC01030393    GEDC01026240    GEDC01021949    GEDC01020577    GEDC01014851    GEDC01007992    GEDC01006621    GEDC01002285    JAS06905.1    JAS11058.1    JAS15349.1    JAS16721.1    JAS22447.1    JAS29306.1    JAS30677.1    JAS35013.1    GEZM01058349    GEZM01058348    JAV71759.1    NEVH01020335    PNF21741.1    APGK01014745    APGK01020092    KB740160    KB739406    ENN81214.1    ENN82284.1    KB632077    ERL88570.1    GDHC01003837    JAQ14792.1    GBHO01034068    GDHC01013398    JAG09536.1    JAQ05231.1    GBRD01011656    JAG54168.1    KK854193    PTY12909.1    GECZ01020333    JAS49436.1    GEBQ01013146    JAT26831.1    GEBQ01032081    JAT07896.1    GBYB01010595    GBYB01010596    JAG80362.1    JAG80363.1    ACPB03002583    KQ414716    KOC62878.1    GBBI01002804    JAC15908.1    GGMS01004602    MBY73805.1    DS235030    EEB10739.1    KQ435005    KZC13408.1    ABLF02032120    GFXV01003485    MBW15290.1    GGMR01020421    MBY33040.1    KQ760662    OAD59519.1    KQ435927    KOX68383.1    KZ288461    PBC25475.1    KK852566    KDR21251.1    KK107144    EZA57526.1    QOIP01000003    RLU25281.1    ADTU01027066    LBMM01001987    KMQ95443.1    KQ981856    KYN34477.1    JH431263    KQ978081    KYM97085.1    KK113914    KFM61352.1    MWRG01004978    PRD30076.1    SAUD01039947    RXG51829.1    KQ982074    KYQ60529.1    AJWK01035350    GFAC01001772    JAT97416.1    GACK01001457    JAA63577.1    AMQN01017368    KB293041    ELU16635.1    GGLE01004660    MBY08786.1    GFWV01010797    MAA35526.1    JH816071    EKC24514.1    MWRG01005659    PRD29510.1    NEDP02076690    OWF35984.1    UFQT01001452    SSX30619.1    GFDL01015711    JAV19334.1    KQ976490    KYM83383.1    CH477320    EAT43650.1    MG197671    AUG84421.1    DS232721    EDS45123.1    KQ978782    KYN28474.1    KQ418549    KOF86907.1    JXUM01004067    JXUM01004068    JXUM01004069    JXUM01004070    JXUM01005781    KQ560201    KXJ83877.1    GL761662    EFZ22979.1    KB200869    ESP00015.1    GL442691    EFN63151.1    GL453897    EFN75317.1    NCKU01000009    RWS17996.1    NCKV01000838    RWS29605.1    AAAB01008980    EAA13775.5    LRGB01000027    KZS21263.1    GDIP01012921    JAM90794.1    GDIP01102085    JAM01630.1    CVRI01000054    CRL00754.1    GDIQ01165370    JAK86355.1    KK113255    KFM59712.1    GDIQ01036666    JAN58071.1    GDIQ01265074    JAJ86650.1    GL732523    EFX90185.1    HG805952    CDW55397.1    HE971733    CCK33022.1    GAMC01018941    GAMC01018940    JAB87615.1    CCAG010002751    JRES01001517    KNC22303.1    GBXI01012914    JAD01378.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000283053    UP000053240    UP000053268    + More
UP000037510    UP000007266    UP000192223    UP000235965    UP000019118    UP000030742    UP000015103    UP000053825    UP000009046    UP000076502    UP000007819    UP000053105    UP000242457    UP000005203    UP000002358    UP000027135    UP000053097    UP000279307    UP000005205    UP000079169    UP000036403    UP000078541    UP000078542    UP000054359    UP000288706    UP000085678    UP000075809    UP000092461    UP000014760    UP000005408    UP000242188    UP000078540    UP000008820    UP000002320    UP000078492    UP000053454    UP000069940    UP000249989    UP000030746    UP000000311    UP000008237    UP000285301    UP000288716    UP000007062    UP000076858    UP000183832    UP000000305    UP000030665    UP000092443    UP000095301    UP000095300    UP000092444    UP000092445    UP000037069    UP000091820   

PRIDE

H9JIS4    L7MIF0   

Pfam

PF01436   NHL        + More
PF00643   zf-B_box
PF13445   zf-RING_UBOX
PF00097   zf-C3HC4
PF09752   DUF2048
PF02892   zf-BED
PF16050   CDC73_N
PF05179   CDC73_C

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR011042   6-blade_b-propeller_TolB-like       
IPR017907   Znf_RING_CS       
IPR001258   NHL_repeat       
IPR001841   Znf_RING       
IPR000315   Znf_B-box       
IPR027370   Znf-RING_LisH       
IPR003649   Bbox_C       
IPR013017   NHL_repeat_subgr       
IPR013087   Znf_C2H2_type       
IPR002048   EF_hand_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR018957   Znf_C3HC4_RING-type       
IPR040100   RNF208_RING-HC       
IPR029058   AB_hydrolase       
IPR019149   ABHD18       
IPR003656   Znf_BED       
IPR037220   BED_dom       
IPR036236   Znf_C2H2_sf       
IPR032041   Cdc73_N       
IPR031336   CDC73_C       
IPR038103   CDC73_C_sf       

SUPFAM

SSF53474   SSF53474        + More
SSF57667   SSF57667       
SSF140996   SSF140996       

Gene 3D

2.120.10.30     3.30.40.10     3.40.50.11990    

CDD

cd00021  BBOX
cd16559  RING-HC_RNF208

ProteinModelPortal

H9JIS4   A0A2A4JPN7   A0A2H1VUN1   A0A212EU52   A0A3S2P147   A0A0N1PJZ9   + More
A0A194Q7Q1   A0A0L7LN57   A0A1E1WUQ7   D2A0S0   A0A1W4WQF3   A0A1B6CC71   A0A1Y1LDM3   A0A2J7PZH7   N6TP29   U4UF78   A0A146M6Y2   A0A0A9WQ39   A0A0K8SLN2   A0A2R7W009   A0A1B6FGV4   A0A1B6LT16   A0A1B6K8W8   A0A0C9RSX1   T1HT84   A0A0L7QW79   A0A023F3H9   A0A2S2Q7T9   E0VBI3   A0A154PQ78   J9K3A6   A0A2H8TMT5   A0A2S2PU95   A0A310SS56   A0A0M8ZRW1   A0A2A3E193   A0A087ZVR7   K7ISI8   A0A067RBK6   A0A026WPE3   A0A3L8DXV6   A0A158NVB9   A0A3Q0JLM8   A0A0J7KYR9   A0A195F2S3   T1IPK5   A0A195C8Q6   A0A087T8B3   A0A2P6KUR7   A0A444SEJ3   A0A1S3JML1   A0A151XJG5   A0A1B0CY34   A0A1E1XEA0   L7MIF0   R7VKA8   A0A2R5LGZ1   A0A293M5D9   K1PZL0   A0A2P6KT45   A0A210PHL4   A0A336MNA1   A0A1Q3EVJ9   A0A195BFK9   Q17BL6   A0A2H5BFB6   B0XCV6   A0A195EKS6   A0A0L8HCK1   A0A182H4D2   E9I8W7   V4CDL6   E2ATR8   E2C9S7   A0A3S3PEW7   A0A443SQ59   Q7PMI8   A0A162SFW8   A0A0P6BLM7   A0A0P5VB53   A0A1J1ILX8   A0A0P5LTT3   A0A087T3M3   A0A0P6H0B1   A0A0P5F121   E9FRJ8   A0A077Z4J3   A0A1A9XL02   A0A1I8MJ76   L0PRP0   A0A1I8PSJ1   W8AGV2   A0A1B0FEZ7   A0A1B0A544   A0A0L0BQN3   A0A1A9W051   A0A0A1WSI9  

PDB

4ZLR     E-value=1.9969e-162,     Score=1472

KEGG

101743927    K11997 tripartite motif-containing protein 2/3 | (RefSeq) brain tumor protein

GO

GO:0008270   GO:0046872   GO:0003676   GO:0005509   GO:0016874   GO:0000209   GO:0043161   GO:0061630   GO:0016570   GO:0016593   GO:0006368   GO:0005622   GO:0005515   GO:0006182   GO:0051603   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

Length:

845

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01605

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00005

outside

1  -  845

 

 

Pi

231.15826

Theta

200.589501

Tajima's D

0.479693

CLR

6.536535

CSRT

0.508224588770561

Interpretation

Uncertain