SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08467
Pre Gene Modal
BGIBMGA009392
Annotation
Uncharacterized_protein_OBRU01_04785_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 3.692
 

Sequence

CDS
ATGGGGGGCTTAACATTCGAAGGCGCATTGAAAAATATCAGTCACATCCAGCTTGAATTTATCAAGGAGGTCCTCGAGAAAAGGGGGTACAATGACAGAGTGGTTCATATAGAGGCGGTCGGGGCGGCCGGAGACAACTTCATCGCCAACGTCAAAAGGATAACAGTCGATGGCGAGAATGGCCCCTTCAAAATGATCGCTAAAATCGCCCCTCAAAATGAAAACGTTAGGATGGCCACACAAACACAGGTCTTATTTGGCAACGAACACCACATGTACACTGTTGTTTTGCCGAAATATCAGCAGCTAGAAGAAGAAGCAGAGATTCCTAATGACGACAGATTCAGATTTGCCGAATGCTATGGCTCAAGCACTCAAGTCCCGCATGAAGTGATATTACTAGAAGATCTACTGGTGCCGGGTTTTAAGATGCTGGACAGGTTCACGTCTCTATCTGACGAATGCATTCGGTCCACGCTCAAAAACTTCGCAAAGTTCCACGCTCTCTCGTTCACGCTTAAAAATAAACAGCCAGAAACCTTTAATTCGCTGAAGAGTAAATTATTCGATATGTGGAGTCACATGGATAGCTCAGCTGATATATACTTCGGAAAACTAGAAGCTGGTGCTGAGCAGCTCGTGGAGGGCGAAGAAAGGAAGAATATAATCAGGGGTGCCATTGGAAAGGCGCTTTCTATGGCACGAAAAATTGCTCAAGTCGAATCAGGGTCAAAATATTTCGTCATTCAACAAGGAGACTCGTGGACTAACAACATAATGTTCAGATATGATTGA
Protein
MGGLTFEGALKNISHIQLEFIKEVLEKRGYNDRVVHIEAVGAAGDNFIANVKRITVDGENGPFKMIAKIAPQNENVRMATQTQVLFGNEHHMYTVVLPKYQQLEEEAEIPNDDRFRFAECYGSSTQVPHEVILLEDLLVPGFKMLDRFTSLSDECIRSTLKNFAKFHALSFTLKNKQPETFNSLKSKLFDMWSHMDSSADIYFGKLEAGAEQLVEGEERKNIIRGAIGKALSMARKIAQVESGSKYFVIQQGDSWTNNIMFRYD

Summary

EMBL
BABH01032944    BABH01032945    JTDY01000475    KOB77012.1    KOB77008.1    NWSH01001948    + More
PCG69594.1    ODYU01012436    SOQ58737.1    SOQ58738.1    PCG69591.1    ODYU01000547    SOQ35490.1    NWSH01000286    PCG77757.1    NWSH01000603    PCG75393.1    ODYU01007302    SOQ49967.1    PCG77758.1    KZ149954    PZC76517.1    PCG69595.1    NWSH01000499    PCG76012.1    SOQ58736.1    KZ150144    PZC72910.1    GDQN01003372    JAT87682.1    PCG69592.1    RSAL01000059    RVE49695.1    PCG69593.1    PCG69599.1    PCG69596.1    GDQN01000534    JAT90520.1    PCG69598.1    SOQ49966.1    PCG69601.1    PCG69600.1    KOB77009.1    KQ460144    KPJ17456.1    KQ459337    KPJ01421.1    KPJ17454.1    KPJ01424.1    KPJ01422.1    KPJ17455.1    GDQN01000227    JAT90827.1    GDQN01001592    JAT89462.1    MG262375    AXX71242.1    CVRI01000006    CRK87815.1    KB631265    ERL84199.1    APGK01033064    KB740860    ENN78592.1    KB632287    ERL91477.1    CH902625    EDV35013.1    CH964239    EDW82231.1    AY061041    AAL28589.1    GBXI01017142    GBXI01002969    JAC97149.1    JAD11323.1    CH940651    EDW65742.1    GEZM01013473    JAV92537.1    GANO01004556    JAB55315.1    KK853171    KDR10313.1    CM000162    EDX01952.2    CH954180    EDV46029.2    GEZM01054023    GEZM01054022    JAV73879.1    CVRI01000010    CRK88711.1    LC384845    BBE28988.1    CH479218    EDW33749.1    GDAI01000636    JAI16967.1    GFDL01000193    JAV34852.1    RSAL01000092    RVE47952.1    CH379065    EAL31429.3    AE014298    AAS65318.1    GFDL01000217    JAV34828.1    AGBW02014964    OWR40805.1    KQ971352    EFA06723.1    KQ971354    KYB26266.1    AGBW02014137    OWR42208.1    PYGN01000305    PSN48850.1    CH480851    EDW51408.1    AGBW02013474    OWR43365.1    KQ459449    KPJ00882.1    GGMR01015810    MBY28429.1    GQ306761    ADG48597.1    AGBW02008687    OWR52782.1    GQ321992    GQ321998    GQ322000    GQ322002    GQ322007    GQ322008    GQ322011    GQ322012    GQ322016    ADG48612.1    ADG48618.1    ADG48620.1    ADG48622.1    ADG48627.1    ADG48628.1    ADG48631.1    ADG48632.1    ADG48636.1    BABH01018451    EU216823    ABW91780.1    EU216814    EU216815    EU216816    EU216818    EU216819    EU216820    EU216821    EU216824    GQ306762    GQ306764    GQ306766    GQ306767    GQ306769    GQ306770    GQ306771    GQ306772    GQ306773    ABW91771.1    ABW91772.1    ABW91773.1    ABW91775.1    ABW91776.1    ABW91777.1    ABW91778.1    ABW91781.1    ADG48598.1    ADG48600.1    ADG48602.1    ADG48603.1    ADG48605.1    ADG48606.1    ADG48607.1    ADG48608.1    ADG48609.1    DS233615    EDS30786.1    GQ317424    ADG48588.1   
Pfam
PF02958   EcKinase        + More
PF05375   Pacifastin_I
PF00232   Glyco_hydro_1
Interpro
IPR015897   CHK_kinase-like        + More
IPR011009   Kinase-like_dom_sf       
IPR004119   EcKinase-like       
IPR008037   Pacifastin_dom       
IPR036201   Pacifastin_dom_sf       
IPR001360   Glyco_hydro_1       
IPR017853   Glycoside_hydrolase_SF       
SUPFAM
SSF56112   SSF56112        + More
SSF57283   SSF57283       
SSF51445   SSF51445       

Ontologies

Topology

Length:
264
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00041
Exp number, first 60 AAs:
0.00041
Total prob of N-in:
0.00589
outside
1  -  264
 
 

Population Genetic Test Statistics

Pi
127.837546
Theta
131.087249
Tajima's D
-0.304305
CLR
0.830289
CSRT
0.286135693215339
Interpretation
Uncertain
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