Gene

KWMTBOMO08460  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009419

Annotation

PREDICTED:_malignant_T-cell-amplified_sequence_1_homolog_[Amyelois_transitella]

Location

Bomo_Chr14(+):9608677-9617196      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.106 Mitochondrial   Reliability : 1.529

CDS

ATGCGTGTGTGTACGTTTGATGAAAAGGAAAGCATATCGGGCGTGCAACAGCTCAAGTCCTCGGTCCAGAAGGGCATAAGGGCTCGCCTTTTGGAACTGTACCCTCATTTGGACAACTACATTGACCAGATCTTACCCAAGAAGGATACGTTTAGGATTGTCAAATGTCACGATCACCTCGAGATAATGGTGAACAGTGCCGGCGACTTGCTATTCTTCAGGCATCGCGAGGGTCCCTGGATGCCAACCTTAAAACTACTGCACAAATATCCGTTCTTCGTTCCGATGCAGCAAGTTGACAAAGGCGCTATTCGCTTCGTGCTCAGCGGCGCGAACATCATGTGTCCGGGGCTGACTTCAGCCAACGCGAAGATGTCTCCGAGCGACAAGGGTCAAGTTGTCGCCATAATGGCCGAGGGGAAAGAACATGCTCTAGCTATCGGTATCACTACTCTCTCAACAGAAGACATAGCTAAAGTGAACAAAGGCGTCGGCGTTGAAAATTGTCATTATCTCAATGACGGGCTGTGGCAGATGAAGGCCGTGAAGTAA

Protein

MRVCTFDEKESISGVQQLKSSVQKGIRARLLELYPHLDNYIDQILPKKDTFRIVKCHDHLEIMVNSAGDLLFFRHREGPWMPTLKLLHKYPFFVPMQQVDKGAIRFVLSGANIMCPGLTSANAKMSPSDKGQVVAIMAEGKEHALAIGITTLSTEDIAKVNKGVGVENCHYLNDGLWQMKAVK

Uniprot

H9JIR8   A0A437BGW9   A0A1E1WKI6   S4PSZ5   A0A194Q8X8   A0A212EWW7   + More
A0A0N1PJP5   A0A0J7NYM0   E2C440   A0A158N902   A0A151IBK9   A0A2A3ESB0   A0A088AGW6   E2A1G7   A0A151K0R0   F4WHK4   A0A154P6T4   A0A151J518   A0A151WNT6   A0A026VSQ6   A0A3L8DT69   A0A232F9X9   K7ISE9   A0A1B6LH62   B0WWD5   A0A1B6K1A1   A0A1Q3F8W8   A0A182NFV0   U5EN77   A0A0L7QWE8   A0A182H411   A0A067RD73   Q170Y4   A0A1B6D2P2   T1PE58   A0A0T6B832   A0A182XXB5   R4V0L8   A0A182M9G3   A0A182RQQ1   A0A1S3DK76   A0A1S4GID1   Q7Q9B2   D2A1L5   J3JY61   A0A182VXS7   A0A182QQW3   A0A1L8ECW0   A0A182JVP3   A0A1I8NQN0   A0A2J7QFS3   T1DNX1   A0A182XKD8   A0A182U207   A0A182HJK6   A0A0L0BZX1   A0A023F9L8   A0A182V4S8   A0A0A1XRX8   A0A0P4VTX8   R4FPP7   A0A182P8P1   A0A2M3Z9Y8   A0A2M4C0U4   W5JUH3   E0W295   A0A0K8TP68   A0A1Y1MUE5   A0A224XLM8   A0A0V0G6M8   A0A0M9A1H8   A0A2M3ZAE5   A0A2M4AK43   W8C2R0   A0A034UZ97   A0A2R7W179   A0A0K8U397   A0A1A9YJ55   A0A1A9UE35   A0A1B0BDG1   A0A1A9ZQF9   A0A182J2X6   A0A336MR50   A0A1B0DB80   A0A170ZKJ2   A0A2H8TZ10   C4WUE2   A0A2S2PKD5   A0A0A9YAF5   A0A1A9W791   A0A1L8DS23   A0A1B6I239   A0A1B0FLI1   B4M785   A0A2L2YB25   A0A2R5LI11   A0A1J1ILS9   B4JX87   B4NQ91   B4L1D5  

Pubmed

19121390    23622113    26354079    22118469    20798317    21347285    + More
21719571    24508170    30249741    28648823    20075255    26483478    24845553    17510324    25315136    25244985    12364791    18362917    19820115    22516182    26108605    25474469    25830018    27129103    20920257    23761445    20566863    26369729    28004739    24495485    25348373    25401762    26823975    17994087    26561354   

EMBL

BABH01032922    BABH01032923    BABH01032924    RSAL01000059    RVE49686.1    GDQN01003524    + More
JAT87530.1    GAIX01012928    JAA79632.1    KQ459337    KPJ01430.1    AGBW02011894    OWR45961.1    KQ459986    KPJ18816.1    LBMM01000785    KMQ97500.1    GL452364    EFN77426.1    ADTU01009011    KQ978095    KYM97025.1    KZ288189    PBC34645.1    GL435766    EFN72640.1    KQ981229    KYN44343.1    GL888161    EGI66358.1    KQ434827    KZC07587.1    KQ980063    KYN17955.1    KQ982907    KYQ49451.1    KK108326    EZA46757.1    QOIP01000004    RLU23363.1    NNAY01000561    OXU27656.1    GEBQ01016924    JAT23053.1    DS232143    DS232270    EDS36027.1    EDS38821.1    GECU01017841    GECU01002495    JAS89865.1    JAT05212.1    GFDL01011076    JAV23969.1    GANO01000706    JAB59165.1    KQ414713    KOC62953.1    JXUM01108588    KQ565245    KXJ71190.1    KK852536    KDR21831.1    CH477463    EAT40525.1    GEDC01017415    JAS19883.1    KA646238    AFP60867.1    LJIG01009221    KRT83514.1    KC632348    AGM32162.1    AXCM01010076    AAAB01008904    EAA09663.4    KQ971338    EFA02688.1    BT128185    AEE63146.1    AXCN02000249    GFDG01002323    JAV16476.1    NEVH01014850    PNF27440.1    GAMD01002480    JAA99110.1    APCN01002178    JRES01001179    KNC24769.1    GBBI01000627    JAC18085.1    GBXI01000560    JAD13732.1    GDKW01000605    JAI55990.1    ACPB03004193    GAHY01000769    JAA76741.1    GGFM01004592    MBW25343.1    GGFJ01009805    MBW58946.1    ADMH02000413    ETN66615.1    DS235875    EEB19751.1    GDAI01001662    JAI15941.1    GEZM01020354    JAV89292.1    GFTR01003030    JAW13396.1    GECL01002515    JAP03609.1    KQ435794    KOX73879.1    GGFM01004766    MBW25517.1    GGFK01007834    MBW41155.1    GAMC01000333    JAC06223.1    GAKP01023359    JAC35599.1    KK854138    PTY11945.1    GDHF01031529    JAI20785.1    JXJN01012467    UFQT01001633    SSX31263.1    AJVK01004663    GEMB01002085    JAS01094.1    GFXV01007709    MBW19514.1    ABLF02041081    AK341028    BAH71512.1    GGMR01016707    MBY29326.1    GBHO01014460    GBRD01009733    GDHC01015249    JAG29144.1    JAG56091.1    JAQ03380.1    GFDF01004883    JAV09201.1    GECU01026717    JAS80989.1    CCAG010005843    CH940653    EDW62652.1    IAAA01009873    LAA04560.1    GGLE01004831    MBY08957.1    CVRI01000050    CRK99417.1    CH916376    EDV95363.1    CH964291    EDW86316.1    CH933810    EDW06656.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000007151    UP000053240    UP000036403    + More
UP000008237    UP000005205    UP000078542    UP000242457    UP000005203    UP000000311    UP000078541    UP000007755    UP000076502    UP000078492    UP000075809    UP000053097    UP000279307    UP000215335    UP000002358    UP000002320    UP000075884    UP000053825    UP000069940    UP000249989    UP000027135    UP000008820    UP000095301    UP000076408    UP000075883    UP000075900    UP000079169    UP000007062    UP000007266    UP000075920    UP000075886    UP000075881    UP000095300    UP000235965    UP000076407    UP000075902    UP000075840    UP000037069    UP000075903    UP000015103    UP000075885    UP000000673    UP000009046    UP000053105    UP000092443    UP000078200    UP000092460    UP000092445    UP000075880    UP000092462    UP000007819    UP000091820    UP000092444    UP000008792    UP000183832    UP000001070    UP000007798    UP000009192   

PRIDE

H9JIR8   

Pfam

PF01472   PUA        + More
PF17832   Pre-PUA

Interpro

IPR016437   MCT-1/Tma20        + More
IPR041366   Pre-PUA       
IPR036974   PUA_sf       
IPR015947   PUA-like_sf       
IPR002478   PUA       
IPR004521   Uncharacterised_CHP00451       

SUPFAM

SSF88697   SSF88697       

Gene 3D

2.30.130.10    

ProteinModelPortal

H9JIR8   A0A437BGW9   A0A1E1WKI6   S4PSZ5   A0A194Q8X8   A0A212EWW7   + More
A0A0N1PJP5   A0A0J7NYM0   E2C440   A0A158N902   A0A151IBK9   A0A2A3ESB0   A0A088AGW6   E2A1G7   A0A151K0R0   F4WHK4   A0A154P6T4   A0A151J518   A0A151WNT6   A0A026VSQ6   A0A3L8DT69   A0A232F9X9   K7ISE9   A0A1B6LH62   B0WWD5   A0A1B6K1A1   A0A1Q3F8W8   A0A182NFV0   U5EN77   A0A0L7QWE8   A0A182H411   A0A067RD73   Q170Y4   A0A1B6D2P2   T1PE58   A0A0T6B832   A0A182XXB5   R4V0L8   A0A182M9G3   A0A182RQQ1   A0A1S3DK76   A0A1S4GID1   Q7Q9B2   D2A1L5   J3JY61   A0A182VXS7   A0A182QQW3   A0A1L8ECW0   A0A182JVP3   A0A1I8NQN0   A0A2J7QFS3   T1DNX1   A0A182XKD8   A0A182U207   A0A182HJK6   A0A0L0BZX1   A0A023F9L8   A0A182V4S8   A0A0A1XRX8   A0A0P4VTX8   R4FPP7   A0A182P8P1   A0A2M3Z9Y8   A0A2M4C0U4   W5JUH3   E0W295   A0A0K8TP68   A0A1Y1MUE5   A0A224XLM8   A0A0V0G6M8   A0A0M9A1H8   A0A2M3ZAE5   A0A2M4AK43   W8C2R0   A0A034UZ97   A0A2R7W179   A0A0K8U397   A0A1A9YJ55   A0A1A9UE35   A0A1B0BDG1   A0A1A9ZQF9   A0A182J2X6   A0A336MR50   A0A1B0DB80   A0A170ZKJ2   A0A2H8TZ10   C4WUE2   A0A2S2PKD5   A0A0A9YAF5   A0A1A9W791   A0A1L8DS23   A0A1B6I239   A0A1B0FLI1   B4M785   A0A2L2YB25   A0A2R5LI11   A0A1J1ILS9   B4JX87   B4NQ91   B4L1D5  

PDB

6MS4     E-value=1.97858e-65,     Score=628

KEGG

101743111    K07575 PUA domain protein | (RefSeq) malignant T-cell-amplified sequence 1 homolog

GO

GO:0003723   GO:0005737   GO:0022627   GO:0002188   GO:0001731   GO:0005524   GO:0006468   GO:0003676   GO:0006182   GO:0051603   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR22798  

Subcellular location

Cytoplasm  

Length:

183

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.24344

Exp number, first 60 AAs:

0.0001

Total prob of N-in:

0.28047

outside

1  -  183

 

 

Pi

256.925442

Theta

174.883741

Tajima's D

1.489396

CLR

0.386728

CSRT

0.786060696965152

Interpretation

Uncertain