SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08456
Pre Gene Modal
BGIBMGA009417
Annotation
PREDICTED:_uncharacterized_protein_LOC101744645_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.611
 

Sequence

CDS
ATGGAAGAGTCGTGCAAACATTACGCTTACTGTAAAACGTGTCAAGATAACATAAAGAAAGTCAAAGGAAGGTACAAGGAAAAAAAAGAATCTTTCGTTGAGATGTTCAAGCAACTTAAAGAAGTTTATGAAACCGAAGTGCAGATGTTAAGGGAGGAAGAAGAGAAGAAAAGAAAGAGACTTCTGGCCGGTCACGCTCAGCAACTGCAGGAGAAGTGTGATGAGTTAGAAGAAACATATAGGTCTCGTGAAGCGAAACTGGAGACGAACATCAGGGAGAAGAAGAAATTCCTTTGGGGCCTCGCGCGGTCACTGCGGGACCAGCACGCGCACGTCGCGCGTGCCATGACCCACCTCAAGCAGGAGACCGACAGGCTGCGTCTCAAGGAAGAAAATCTGAGAGTGAAAGTAGCCGAAGCGGAAACACTTCTAAGAGAACGCGCCGAAGAGATGCGAACACAAATATCGAACGAACTCGTCACACTGTCGAGACATCTCGACACGATGCGGACAGAACGAGAAGCCATAAACAAGGAACGAGACGAATTACAACAATTGAAGATATCCAAAAACTCGAATAATATCGATAAAGATCTCGGTTCGCGTTACGACAGTTTGCGAGATGAAATATCGATATTGAAACGATACATCGAATCGAATAAACTGAAGTGTACCGCGGAGAAAAGCACTATTACCGATTCTGGTGATGTCCATGTGCTGAACAACAGTAATGATGTCGGGTGTGACAGGAGTGACGGTAAAGTGAAAGACAGCAATGTTGTTAACGATCTGAAGAGGCTGAAGAATGTTAACTTTTGTCAGGCAAGCGTCTATGATGTCAAGCGGGAACCAAGTCGAGACCGAGGTGAATCAAGTTCCAGGAGAACGATAGAAAGTGAATTCAGATATGTCGAACGATTATTACGTTTGCAAGAAGAGAACAATAGACTGAGAATGATTTCGCAACAAGCGTGTGCCATCTCGCAAGCGCCACTAATGTGTCCGTCGCAGCGCTACAACCACGAGCCCGCGCCGGGTGTGATGCGCTCGGAACCCGGATATACCCGAATTTCGCCATCGGGCGCGTCCAACGCGTCACATGTCGCGCATCACCAAGGGTCCGGCGAGGAGCTGTCCTGGTTCGCGACCACGAGGCCTCGGGTGCTGTTGCCCGGTGACCTCGTGCCTTTTATCGGCGTCGTAGCGAGCAGGATCGGGGCAGATACGCGGGCGAAGTACCCGCAGCGCGCGTCACCCGCCCGGCGCGATCCCCCCGCCCCGCGCGACCCCCCCGGGAGCCGAGGTCGCAGTCGAGATTCGGAGCTGCTTGGAAATACGGATGATGTCCCGGGACTTATTCCAGACGAACCTCGTATCGTTCGGATGTCGAGAGATGACCACCCGTCCCCCGCGCCGCCCCCCACAGAGACATCCCACTCCGCCCCCCGAGCCGCTAGAAGAAAGTTGAAATCCAATGAAACGAAACTCCCCCGGCGAGCATCGCACACTGACGAGTGCCCGAGCTCTGTTCTCCGAGAAGCGAAGCTGCGCCTCCGGAAACTGGAGATCGAAGCGGAAGCCGTCCAGATGTCGTACTTACAGTTCCGGGGGCGAAGCTCCCAGGAGAAGAACCGCGCCGGACCGCGCCTGGGGACTGCTCTGGGCCTGGATACTAAGAGAAGCAAGTCGTTACAACAAGTAAACAGTCAAGATAAATTAGAATTTGAAAGGAAACAAATCGAGGAGGACCTCAAGAGAGACATCGATAAACATCTCAAACAGTACGCGACGAAACTTGATGTCATAGATACGCGTTTTAAGAACAGAACCACTAGTTCTATAGCGGCGGCGCCAGTGCCCGCGGGCCACAGCGCGCTCCAGGACAACGAACTCAACAACTACCTGGAAACTCCTCTCAGCGAGTTCAGGAAATATTATCAAACCGACAGAATTCTTAGAAATGGAAATGCGAACGCGCGCAAACAAAATATCGATTTGGACGCTCAAAATAACTCTTCAGATATTGGTAGTGTACCCAGCAAAGATAACGTTGTACACTCAAGTGCAGATATCGATGAAATAAATAGAGTTAAAGTTATTGAAAAACAATCTGGTGACTATAATAATGAAGAAGACAACGAATTAGCGAAAGAAACTTTAAATAGTGAAATATTAATTGACAATGAGAAATCTAAAACAATGATGCTTAGTGCCGTAACGAAATCTGTCAGTGACGATACAAAAGCAGATGAGGTTTTAAATGAAATTATAGAAACAAATAGTCTTATGATTGAAACGGTCCAAGCTGTTCCGATATCGGAAGGCGATGTAAAAACGCAATGTATAGAAACAGTACCGTCTGCAGAACCAATAGAAATTAATATAACGGATAACAATTTACTTAGAGTTGAAATTGAAAGCGAAGATGTCGGTAACAAAGATTCTAAAACGGAAATGTCGGTATTGGTCAGTCCACAGAGCGAAGTCGACTATAGCTTATCGCCGCGAATGACTATACTGGTTAGTCCGAAACGCGGTATTCCCGGAGAATCGACTTATAAACTAGCCGATCCGGACTTGGAAGGTTCCGCGAATGTTCTAGACTCGATATTTAAGGCGAACGATGAGGCCGCGTCCAGTGTGGACTTGCAGATAGAGCTAGAGAAAGAGGGTGATTCGTTGAGCGAAGGAAGGACCGGCGACAAGGACTACGGAGACGATTTCTCGGCCGACGTCGACAATTACAATAGCCGATCTTCGGATTTCGAAATTGACTCTCCCGTCTCACTGCCCAAGACATACGAAGATGAACAGTTTTGGGATTCATGA
Protein
MEESCKHYAYCKTCQDNIKKVKGRYKEKKESFVEMFKQLKEVYETEVQMLREEEEKKRKRLLAGHAQQLQEKCDELEETYRSREAKLETNIREKKKFLWGLARSLRDQHAHVARAMTHLKQETDRLRLKEENLRVKVAEAETLLRERAEEMRTQISNELVTLSRHLDTMRTEREAINKERDELQQLKISKNSNNIDKDLGSRYDSLRDEISILKRYIESNKLKCTAEKSTITDSGDVHVLNNSNDVGCDRSDGKVKDSNVVNDLKRLKNVNFCQASVYDVKREPSRDRGESSSRRTIESEFRYVERLLRLQEENNRLRMISQQACAISQAPLMCPSQRYNHEPAPGVMRSEPGYTRISPSGASNASHVAHHQGSGEELSWFATTRPRVLLPGDLVPFIGVVASRIGADTRAKYPQRASPARRDPPAPRDPPGSRGRSRDSELLGNTDDVPGLIPDEPRIVRMSRDDHPSPAPPPTETSHSAPRAARRKLKSNETKLPRRASHTDECPSSVLREAKLRLRKLEIEAEAVQMSYLQFRGRSSQEKNRAGPRLGTALGLDTKRSKSLQQVNSQDKLEFERKQIEEDLKRDIDKHLKQYATKLDVIDTRFKNRTTSSIAAAPVPAGHSALQDNELNNYLETPLSEFRKYYQTDRILRNGNANARKQNIDLDAQNNSSDIGSVPSKDNVVHSSADIDEINRVKVIEKQSGDYNNEEDNELAKETLNSEILIDNEKSKTMMLSAVTKSVSDDTKADEVLNEIIETNSLMIETVQAVPISEGDVKTQCIETVPSAEPIEINITDNNLLRVEIESEDVGNKDSKTEMSVLVSPQSEVDYSLSPRMTILVSPKRGIPGESTYKLADPDLEGSANVLDSIFKANDEAASSVDLQIELEKEGDSLSEGRTGDKDYGDDFSADVDNYNSRSSDFEIDSPVSLPKTYEDEQFWDS

Summary

Pfam
PF16045   LisH_2
Interpro
IPR006594   LisH       
ProteinModelPortal

Ontologies

GO

Topology

Length:
942
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00253
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00013
outside
1  -  942
 
 

Population Genetic Test Statistics

Pi
319.41718
Theta
197.280866
Tajima's D
2.33199
CLR
0.197598
CSRT
0.924953752312384
Interpretation
Uncertain
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