Gene

KWMTBOMO08449

Pre Gene Modal

BGIBMGA009415

Annotation

PREDICTED:_RIB43A-like_with_coiled-coils_protein_2_[Amyelois_transitella]

Location

Bomo_Chr14(+):9495247-9502098      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.875

CDS

ATGCTGAAATTACAAATAGCCAACGAACAGGACAGAAAAGAAGCACAGAATAGAGAGAGGAGGAGACAGTGTGAACTAGAAAGGAGAAATAGGATCTTCAATGCGAGAAACAGGAAAATTGGTGTAGATGTTCCGTTCCTCGAGCGTCAGGTCCAAGAGAAGAGATCAGAACGAGAGGAGCAGCAAAGACGGGAGCTGGCCTTCGCGCAACAGATGATCAAAGACAGTAACCTGGCCGCGGTCTTAGAAGCCAGACAGAGAGAAGAACGTCGTCGTATCGGCTTGGAAATAGACAAGTACCGTCAGAATTACCAACGAACCGAGGATCGACGCGAGTTTGACCTGAACGACCCCGACGTTCTTAAGAAGCAGCTGCCCCCGAGAGCTTCCGATGGTGATCCTGTCGGAATGTCCAGTGCACAAAAATTCGAAGGTGAAGATTTAAATTACGAAGAACGGAAGAAGCTGATGGCGGCCCAGAAGAACGCCTGGCTCGAACAGCAGGTCCAAGAACGGAAGGGCGCCGAGGAAGAACGCAAAAAAGCCGAAGCAGCATATATGGTGAGCAAGCGATCGGGGGACCCGGGTAAATTACCCCAAATGGGGTAA

Protein

MLKLQIANEQDRKEAQNRERRRQCELERRNRIFNARNRKIGVDVPFLERQVQEKRSEREEQQRRELAFAQQMIKDSNLAAVLEARQREERRRIGLEIDKYRQNYQRTEDRREFDLNDPDVLKKQLPPRASDGDPVGMSSAQKFEGEDLNYEERKKLMAAQKNAWLEQQVQERKGAEEERKKAEAAYMVSKRSGDPGKLPQMG

Uniprot

H9JIR4   A0A2H1VNM7   A0A437BH01   A0A194Q5P9   A0A0N1IQ51   A0A2A4JGV9   + More
A0A212EWZ0   N6UWD2   N6UG96   U4UZ52   A0A1B6MRV4   A0A1B6EV17   A0A1Y1LPA5   A0A1Y1LR52   A0A0C9R343   A0A154P815   D1ZZC6   A0A1B6BY07   A0A2H1CPS7   R7TH24   A0A182PYL7   A0A336LXP5   A0A182RSX1   A0A1I8JTF8   A0A182VLT3   Q7PY39   A0A182LA55   A0A182TFJ4   A0A182JW93   A0A1I8JVW4   B2GUR7   F7DGR2   A0A3S1AWD9   F6RGF3   A0A182FPX0   A0A074ZZ37   A0A182NRS1   K7IX92   A0A182VZN8   A0A182MJH0   A0A1S8WS24   A0A419PG18   E2BJH4   W5JJ76   A0A1B8XZM0   A0A0K8U5N2   W4ZHB7   A0A267E4H6   A0A1I8G518   A0A084VZE4   A0A1W4W4K8   W6UCN3   A0A2G8L132   A0A182Y3U1  

Pubmed

19121390    26354079    22118469    23537049    28004739    18362917    + More
19820115    23254933    12364791    14747013    17210077    20966253    20431018    20075255    20798317    20920257    23761445    26392545    24438588    24013640    29023486    25244985   

EMBL

BABH01032915    ODYU01003513    SOQ42397.1    RSAL01000059    RVE49680.1    KQ459460    + More
KPJ00679.1    KQ459986    KPJ18825.1    NWSH01001448    PCG71211.1    AGBW02011894    OWR45954.1    APGK01005619    APGK01005620    APGK01005621    APGK01009971    APGK01009972    APGK01009973    APGK01017333    APGK01017334    APGK01017335    KB740010    KB738081    KB736342    ENN81903.1    ENN82779.1    ENN83217.1    APGK01027687    APGK01027688    KB740667    ENN79656.1    KI207069    ERL95625.1    GEBQ01001341    JAT38636.1    GECZ01028236    JAS41533.1    GEZM01050646    GEZM01050639    JAV75463.1    GEZM01050644    GEZM01050643    JAV75451.1    GBYB01002360    JAG72127.1    KQ434827    KZC07474.1    KQ971338    EFA02349.2    GEDC01031364    JAS05934.1    KZ428741    PIS89461.1    AMQN01014106    KB310746    ELT90866.1    UFQT01000264    SSX22580.1    APCN01000910    AAAB01008987    EAA00840.3    BC166382    AAI66382.1    AAMC01131793    AAMC01131794    AAMC01131795    AAMC01131796    RQTK01000880    RUS73971.1    KL596632    KER32698.1    AAZX01000577    AXCM01000028    KV895529    OON17320.1    NIRI01002522    RJW61031.1    GL448571    EFN84131.1    ADMH02001345    ETN62940.1    KV460663    OCA16127.1    GDHF01030634    JAI21680.1    AAGJ04158371    NIVC01002616    PAA56475.1    NIVC01001011    PAA73431.1    ATLV01018748    KE525248    KFB43338.1    APAU02000061    EUB58471.1    MRZV01000269    PIK53966.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000053240    UP000218220    UP000007151    + More
UP000019118    UP000030742    UP000076502    UP000007266    UP000014760    UP000075885    UP000075900    UP000075840    UP000075903    UP000007062    UP000075882    UP000075902    UP000075881    UP000076407    UP000008143    UP000271974    UP000069272    UP000075884    UP000002358    UP000075920    UP000075883    UP000008237    UP000000673    UP000007110    UP000215902    UP000095280    UP000030765    UP000192221    UP000019149    UP000230750    UP000076408   

PRIDE

H9JIR4   

Pfam

PF05914   RIB43A

Interpro

IPR008805   RIB43A       

ProteinModelPortal

H9JIR4   A0A2H1VNM7   A0A437BH01   A0A194Q5P9   A0A0N1IQ51   A0A2A4JGV9   + More
A0A212EWZ0   N6UWD2   N6UG96   U4UZ52   A0A1B6MRV4   A0A1B6EV17   A0A1Y1LPA5   A0A1Y1LR52   A0A0C9R343   A0A154P815   D1ZZC6   A0A1B6BY07   A0A2H1CPS7   R7TH24   A0A182PYL7   A0A336LXP5   A0A182RSX1   A0A1I8JTF8   A0A182VLT3   Q7PY39   A0A182LA55   A0A182TFJ4   A0A182JW93   A0A1I8JVW4   B2GUR7   F7DGR2   A0A3S1AWD9   F6RGF3   A0A182FPX0   A0A074ZZ37   A0A182NRS1   K7IX92   A0A182VZN8   A0A182MJH0   A0A1S8WS24   A0A419PG18   E2BJH4   W5JJ76   A0A1B8XZM0   A0A0K8U5N2   W4ZHB7   A0A267E4H6   A0A1I8G518   A0A084VZE4   A0A1W4W4K8   W6UCN3   A0A2G8L132   A0A182Y3U1  

KEGG

101742537    no KO assigned | (RefSeq) RIB43A-like with coiled-coils protein 2

GO

GO:0016021  

PANTHER

PTHR14517  

Length:

202

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08864

outside

1  -  202

 

 

Pi

264.559232

Theta

188.002523

Tajima's D

1.371331

CLR

0.052964

CSRT

0.75911204439778

Interpretation

Uncertain