Gene

KWMTBOMO08443

Pre Gene Modal

BGIBMGA009413

Annotation

PREDICTED:_intraflagellar_transport_protein_57_homolog_[Amyelois_transitella]

Location

Bomo_Chr14(+):9287312-9288555      View in EpiBrowser

Full name

Intraflagellar transport protein 57 homolog      

Location in the cell

Nuclear   Reliability : 2.845

CDS

ATGGATTTAAGACTTATGGATAAATTACGTTTATTAAAAATCGACACGGATCTGCGTCCCCAGATAAAAATGAAACCGTTGAGTCGATATTATTTCGTGACGTCCACTAATCCGAACGAACAGTTTTTCGTGTTTGCCTCGACAGCGGCCTGGTTGATAAGGAAGTGTGGCAAGGATTTCGCTCAGCCCAACGAAGAGGACGATCCTAACACAATCATAGCTGCAGTAATTGATGTACTCAAAGAAAACGAAGTTAATGTAGATTTCTCTTCGCATAAACTAAAACAAGGATGGGGCGATCAAGTTTGTAGTATCCTGAATATTCTCGCAGATGAAGCATTGAAAAAAGAAAACTTTGAATGGCAAAAACCAGTTGTTGACATACCAGAATCAGAAGAGTCGGTTGATGACATTGATCAAGTTGAAGACGAAACCGAAATATTACTGGACAAAGTTGAAGATGAAATGCCCATTTATTCTGATGAATCTGAAGGAGATATTAATGCAGACGAAAAAGAACCAAGTAACATAGCCCAAAAGGTTCACGATTGGGAAGCGTGGAAGTTGGAATTGGAAAGGGTCGCTCCGGCTCTAAGATTGAAGATATCCGCCGATGGACGCGACTGGCGAGCGAGACATGCACAGATGAGGAGTTACAAAGAAGAGTTATTCGATAGATTTAAAACAACGGGAACCCAGCTGAATAAATTGCACAGTAGCATTTCATCGGCTATGGATAAGGTAACGGCCAGGGAGAATATATTGAATGAGCAATTCGAGCCTCTTGTCAAAGAATATGGTTCTCTACTCGACGAACTAAACAAAGTGTCAAATGAATATAAAGAGGCCAGTGTAGGTATCACTGAAAGGCAAGACATGTTGAACGAGCTTTCAACAAAGCTAGAGAATATTAAACAAAGAACCGAATCTAAAGGGTCCTCGATGAACGACAATTCTCCTCTAGTTACAGCAAAGAAAGCTGTCGCGACCTTGAAGAAAGATATACAGGAAATGGACTTTCAGATCACGGTGTTGCTGTGGCTTCTGACAACAAAGGAATCGAATGGCAACAGTTTACTTAATAACAAGGAATCTGGGATGATTGCCAACGAAGTGTACTAA

Protein

MDLRLMDKLRLLKIDTDLRPQIKMKPLSRYYFVTSTNPNEQFFVFASTAAWLIRKCGKDFAQPNEEDDPNTIIAAVIDVLKENEVNVDFSSHKLKQGWGDQVCSILNILADEALKKENFEWQKPVVDIPESEESVDDIDQVEDETEILLDKVEDEMPIYSDESEGDINADEKEPSNIAQKVHDWEAWKLELERVAPALRLKISADGRDWRARHAQMRSYKEELFDRFKTTGTQLNKLHSSISSAMDKVTARENILNEQFEPLVKEYGSLLDELNKVSNEYKEASVGITERQDMLNELSTKLENIKQRTESKGSSMNDNSPLVTAKKAVATLKKDIQEMDFQITVLLWLLTTKESNGNSLLNNKESGMIANEVY

Description

Required for the formation of cilia. May also have pro-apoptotic function (By similarity).

Similarity

Belongs to the IFT57 family.

Keywords

Apoptosis   Cell projection   Cilium   Coiled coil   Cytoplasm   Cytoskeleton   Complete proteome   Reference proteome  

Feature

chain  Intraflagellar transport protein 57 homolog

Uniprot

H9JIR2   A0A2H1VJA5   A0A0L7LU39   A0A3S2M2F3   A0A0N1PJ04   A0A2A4JZ54   + More
A0A0N0PA77   A0A212FC16   A0A1Y1MR29   A0A154PCW4   A0A310SUD6   A0A0L7QY14   A0A2A3EFB7   A0A087ZYQ6   A0A026W8R1   E2A0F4   A0A0J7KV10   A0A067RWC7   A0A232EJ68   K7IWF7   E2C7F4   A0A151X595   T1D1P4   V4CDF6   A0A1B6ET33   D2A1Z1   U4U4J3   A0A0C9R893   A0A2J7Q8A9   A0A1S3HWL6   A0A151IFS7   A0A158NR94   E9IRY6   B7ZSZ1   F4WB15   T1I8Q9   A0A1L8H8C7   A9ULY7   Q28HX4   A0A2B4RCL5   A0A2P6KB65   A0A2J7Q8B5   A0A0K2UHI4   A0A401PYG6   E0W3W5   B0XJ67   A0A0B7A0J5   A0A093PNM2   A0A226MHY0   A0A195FKR2   A0A195BFD1   A0A3P9AAA4   A0A433SNC3   A0A151IU86   M3XJ29   W5N4V1   V9KHY8   H3AVF8   U3JVE8   A0A087VJL0   A0A402F2Y2   W5QC51   A0A452F428   A0A210QX12   A0A1B6D1U8   K1Q768   A0A151MDE0   A0A182JDK0   A0A218UDY3   A0A182VU93   A0A084VYM1   A0A2C9JQ06   A0A182NGK5   A0A3P9AA86   A0A094ML99   A0A2C9JQ20   A0A2K6QL62   A0A2K6L558   A0A182Y945   A0A2K5JM70   A0A1V4J3G4   A0A091EKR3   A0A182MW88   A0A452IJ74   A0A182LMZ9   A0A182I763   A0A182RUR4   A0A182URF3   A0A182XDD9   Q7PWS1   A0A091FWG3   A0A401SX96   A0A3Q0RZF4   A0A182TVV3   Q16Z39   A0A182H401   A0A182QYN7   A0A3Q4HIA9   A7RYI7   A0A093QZ90  

Pubmed

19121390    26227816    26354079    22118469    28004739    24508170    + More
30249741    20798317    24845553    28648823    20075255    23254933    18362917    19820115    23537049    21347285    21282665    21719571    27762356    30297745    20566863    25069045    9215903    24402279    20809919    28812685    22992520    22293439    24438588    15562597    25362486    25244985    28562605    20966253    12364791    14747013    17210077    17510324    26483478    25186727    17615350   

EMBL

BABH01032898    ODYU01002686    SOQ40512.1    JTDY01000124    KOB78726.1    RSAL01000059    + More
RVE49709.1    KQ459986    KPJ18831.1    NWSH01000337    PCG77287.1    KQ458751    KPJ05300.1    AGBW02009237    OWR51286.1    GEZM01023910    GEZM01023908    JAV88143.1    KQ434875    KZC09769.1    KQ759870    OAD62419.1    KQ414697    KOC63502.1    KZ288269    PBC29899.1    KK107390    QOIP01000007    EZA51414.1    RLU20264.1    GL435586    EFN73091.1    LBMM01002820    KMQ94322.1    KK852424    KDR24184.1    NNAY01004085    OXU18395.1    GL453369    EFN76141.1    KQ982540    KYQ55430.1    GAKT01000133    JAA92929.1    KB200869    ESO99934.1    GECZ01028692    JAS41077.1    KQ971338    EFA02064.2    KB631708    ERL85516.1    GBYB01009102    JAG78869.1    NEVH01016966    PNF24818.1    KQ977771    KYN00004.1    ADTU01023830    ADTU01023831    GL765283    EFZ16746.1    BC170691    BC170695    AAI70691.1    GL888056    EGI68635.1    ACPB03008247    CM004469    OCT92358.1    BC157452    CR760693    LSMT01000654    PFX15391.1    MWRG01017311    PRD23575.1    PNF24819.1    HACA01020174    CDW37535.1    BFAA01010392    GCB78146.1    DS235883    EEB20321.1    DS233443    EDS30030.1    HACG01027508    CEK74373.1    KL670098    KFW78433.1    MCFN01000835    OXB54902.1    KQ981522    KYN40584.1    KQ976504    KYM82897.1    RQTK01001353    RUS70688.1    KQ980970    KYN10931.1    AFYH01095425    AFYH01095426    AFYH01095427    AFYH01095428    AFYH01095429    AFYH01095430    AFYH01095431    AHAT01002473    JW865017    AFO97534.1    AGTO01021196    KL495796    KFO12802.1    BDOT01000090    GCF50885.1    AMGL01008077    AMGL01008078    LWLT01000001    NEDP02001451    OWF53254.1    GEDC01028731    GEDC01017631    JAS08567.1    JAS19667.1    JH819177    EKC27109.1    AKHW03006231    KYO22515.1    MUZQ01000392    OWK51876.1    ATLV01018379    KE525231    KFB43065.1    KL344053    KFZ54708.1    LSYS01009367    OPJ66728.1    KK718610    KFO57636.1    AXCM01000336    APCN01003368    AAAB01008984    EAA14896.4    KL447422    KFO73406.1    BEZZ01000656    GCC35015.1    CH477499    EAT39911.1    JXUM01025948    KQ560739    KXJ81066.1    AXCN02002086    DS469553    EDO43467.1    KL431238    KFW91695.1   

Proteomes

UP000005204    UP000037510    UP000283053    UP000053240    UP000218220    UP000053268    + More
UP000007151    UP000076502    UP000053825    UP000242457    UP000005203    UP000053097    UP000279307    UP000000311    UP000036403    UP000027135    UP000215335    UP000002358    UP000008237    UP000075809    UP000030746    UP000007266    UP000030742    UP000235965    UP000085678    UP000078542    UP000005205    UP000007755    UP000015103    UP000186698    UP000008143    UP000225706    UP000288216    UP000009046    UP000002320    UP000053258    UP000198323    UP000078541    UP000078540    UP000265140    UP000271974    UP000078492    UP000008672    UP000018468    UP000016665    UP000288954    UP000002356    UP000291000    UP000242188    UP000005408    UP000050525    UP000075880    UP000197619    UP000075920    UP000030765    UP000076420    UP000075884    UP000233200    UP000233180    UP000076408    UP000233080    UP000190648    UP000052976    UP000075883    UP000291020    UP000075882    UP000075840    UP000075900    UP000075903    UP000076407    UP000007062    UP000053760    UP000287033    UP000261340    UP000075902    UP000008820    UP000069940    UP000249989    UP000075886    UP000261580    UP000001593   

PRIDE

H9JIR2    A9ULY7   

Pfam

PF10498   IFT57

Interpro

IPR019530   Intra-flagellar_transport_57        + More
IPR007110   Ig-like_dom       

ProteinModelPortal

H9JIR2   A0A2H1VJA5   A0A0L7LU39   A0A3S2M2F3   A0A0N1PJ04   A0A2A4JZ54   + More
A0A0N0PA77   A0A212FC16   A0A1Y1MR29   A0A154PCW4   A0A310SUD6   A0A0L7QY14   A0A2A3EFB7   A0A087ZYQ6   A0A026W8R1   E2A0F4   A0A0J7KV10   A0A067RWC7   A0A232EJ68   K7IWF7   E2C7F4   A0A151X595   T1D1P4   V4CDF6   A0A1B6ET33   D2A1Z1   U4U4J3   A0A0C9R893   A0A2J7Q8A9   A0A1S3HWL6   A0A151IFS7   A0A158NR94   E9IRY6   B7ZSZ1   F4WB15   T1I8Q9   A0A1L8H8C7   A9ULY7   Q28HX4   A0A2B4RCL5   A0A2P6KB65   A0A2J7Q8B5   A0A0K2UHI4   A0A401PYG6   E0W3W5   B0XJ67   A0A0B7A0J5   A0A093PNM2   A0A226MHY0   A0A195FKR2   A0A195BFD1   A0A3P9AAA4   A0A433SNC3   A0A151IU86   M3XJ29   W5N4V1   V9KHY8   H3AVF8   U3JVE8   A0A087VJL0   A0A402F2Y2   W5QC51   A0A452F428   A0A210QX12   A0A1B6D1U8   K1Q768   A0A151MDE0   A0A182JDK0   A0A218UDY3   A0A182VU93   A0A084VYM1   A0A2C9JQ06   A0A182NGK5   A0A3P9AA86   A0A094ML99   A0A2C9JQ20   A0A2K6QL62   A0A2K6L558   A0A182Y945   A0A2K5JM70   A0A1V4J3G4   A0A091EKR3   A0A182MW88   A0A452IJ74   A0A182LMZ9   A0A182I763   A0A182RUR4   A0A182URF3   A0A182XDD9   Q7PWS1   A0A091FWG3   A0A401SX96   A0A3Q0RZF4   A0A182TVV3   Q16Z39   A0A182H401   A0A182QYN7   A0A3Q4HIA9   A7RYI7   A0A093QZ90  

KEGG

101744075    K04638 intraflagellar transport protein 57 | (RefSeq) intraflagellar transport protein 57 homolog

GO

GO:0031514   GO:0042073   GO:0005794   GO:0005929   GO:0030992   GO:1905515   GO:0005813   GO:0005737   GO:0006919   GO:0036064   GO:0006915   GO:0042981   GO:0032006   GO:0003351   GO:0045494   GO:0007368   GO:0042462   GO:0005930   GO:0007224   GO:0044458   GO:0032391   GO:0001947   GO:0060972   GO:0044292   GO:0001843   GO:0050680  

PANTHER

PTHR16011  

Subcellular location

  

Length:

373

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.19184

Exp number, first 60 AAs:

0.19082

Total prob of N-in:

0.02013

outside

1  -  373

 

 

Pi

286.490571

Theta

200.091436

Tajima's D

1.416053

CLR

0.299525

CSRT

0.769261536923154

Interpretation

Uncertain