Silkworm Genome Informatics Database

Gene

KWMTBOMO08438

Pre Gene Modal

BGIBMGA009406

Annotation

PREDICTED:_uncharacterized_protein_LOC105841932_[Bombyx_mori]

Location

Bomo_Chr14(-):9160636-9161251 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.438

CDS

ATGAATACAAACAGCAGACGCAAAAGAAAATCAACAGTATTGACGGACACTCCTGAAAAACAAGCTTTACAAAAGGAATATGAGGAAAAGATGAAGAAAAAACAGAAAAAAGATGACAAAGTTAAAGGAAAAGGTAAAGGAAAGGGGAAGGGGAAAGACAAACGTAAATCAACAAAAAATAAAACTGGAGTGAACAGAGCTAAAAAAAAAATTTTATGTTCAAATTCCGAATCTGAATCAGAAGAGTGGTATTGTCTAGTATGTGGGGAAGCTTATACAGATTCAAATAAAGAAGATTGGGTCGAGTGTATCATTTGTAAGATGTGGGCACATGTAGGATGTGTTATAGGAGACACTATATCTTTTATTTGTATTAATTGTAGCTCTGATGAAGACTGA

Protein

MNTNSRRKRKSTVLTDTPEKQALQKEYEEKMKKKQKKDDKVKGKGKGKGKGKDKRKSTKNKTGVNRAKKKILCSNSESESEEWYCLVCGEAYTDSNKEDWVECIICKMWAHVGCVIGDTISFICINCSSDED

Uniprot

H9JIQ5 A0A1W4WAP5 A0A2A4J1E0 H9J1I5 A0A2A4JQE1 J9L0T0 + More
J9LYH9 A0A2H1VA32 A0A2H1WZE3 A0A2S2P7Y0 A0A146SET6 A0A2S2NUG4 J9K539 A0A2H9T3C2 A0A1E1W4J7 X1XKW0 H9IUQ1

Pubmed

19121390 29150518

EMBL

BABH01032888 NWSH01003711 PCG65895.1 BABH01023697 NWSH01000827 PCG73986.1 + More
ABLF02020668 ABLF02014121 ODYU01001473 SOQ37710.1 ODYU01012198 SOQ58377.1 GGMR01012679 MBY25298.1 GCES01107185 JAQ79137.1 GGMR01008148 MBY20767.1 ABLF02011603 NSIT01000429 PJE77687.1 GDQN01009146 JAT81908.1 ABLF02018523 ABLF02018527 BABH01000686

Proteomes

UP000005204 UP000192223 UP000218220 UP000007819

PRIDE

H9JIQ5 H9J1I5 H9IUQ1

Pfam

PF03184   DDE_1        + More
PF00665   rve
PF17921   Integrase_H2C2
PF03221   HTH_Tnp_Tc5
PF02338   OTU

Interpro

IPR011011   Znf_FYVE_PHD        + More
IPR013083   Znf_RING/FYVE/PHD
IPR004875   DDE_SF_endonuclease_dom
IPR012337   RNaseH-like_sf
IPR001584   Integrase_cat-core
IPR036397   RNaseH_sf
IPR041588   Integrase_H2C2
IPR006600   HTH_CenpB_DNA-bd_dom
IPR001965   Znf_PHD
IPR003323   OTU_dom
IPR002219   PE/DAG-bd
IPR003599   Ig_sub
IPR036179   Ig-like_dom_sf

SUPFAM

SSF57903   SSF57903        + More
SSF53098   SSF53098
SSF48726   SSF48726

Gene 3D

3.30.40.10 3.30.420.10

ProteinModelPortal

H9JIQ5 A0A1W4WAP5 A0A2A4J1E0 H9J1I5 A0A2A4JQE1 J9L0T0 + More
J9LYH9 A0A2H1VA32 A0A2H1WZE3 A0A2S2P7Y0 A0A146SET6 A0A2S2NUG4 J9K539 A0A2H9T3C2 A0A1E1W4J7 X1XKW0 H9IUQ1

KEGG

NA

GO

GO:0046872 GO:0003676 GO:0015074 GO:0035556 GO:0016021

Length:

132

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.36751

Exp number, first 60 AAs:

0

Total prob of N-in:

0.86942

inside

1 - 132

Pi

470.147996

Theta

198.937132

Tajima's D

4.29112

CLR

0.242162

CSRT

0.999650017499125

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics