SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08437
Pre Gene Modal
BGIBMGA009407
Annotation
PREDICTED:_uncharacterized_protein_LOC106135609_[Amyelois_transitella]
Location
Bomo_Chr14(-):9136620-9188371      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.31
 

Sequence

CDS
ATGTCAAATTTTCAACGTACGCGCAGCAAGGTCTGGTGGGGTGATTCACCGCCGAATCTCGGCAGTCCCGTGGCTCAGCCTGCTGAGTGGAACCGAGATAATCGGACGCGAGAGGAACAACAATGGGAACCTCAGCTACCCCACTGGATAGCAAATCAGCCGGAGCAACAAAGGAACAATAGCGCCGATAACATTGCACAACCCAATGCGCAGATAAATCAGTGGCCTTTAAGGCATGGCAGCCCTGGCAGTCACAAAAGCCAAGATTCCGGATTTTCCGATTCAGATAGTTCGCCGCCCCCTTCGCAGTACTACGCGCCGCCGGAAACAAACGAGTCAAATAATAAATCTTCTAGTAGTAGCGATTCTAACAACAATGAGAACGTTACGATCAAACATGTGGAATTTGTGAACACGCCTCAGAACGTAGATGTTGTGGATAGCTCAAGGACATCACCAAACAATGAAGTCCCGACGCCCAAGCCAAGACTGCGTAGCAGTAGCGTTATTCAAACTCCGTACGATCTACAAAAATATTATGAGATACACAGAGATGAAGAACACATGGATCTTTTGAAGGACAAGGGCCCAGGAGAAGAAAATAAAAATGAAGATGAAAACTCTCACAAAAAAGTCAACAATGATAACTTAAATAAAGAAAACACGAAACCAATTTCATCTAAGAACTACAAAGCTTGCAATGTACTAAAGAACAATAACGCAACTTTAAATAAAATAAGTAACAAAGAATTATTGAGTCCAATAAAACATGATACCAAAGAAGTACCGATTAAAAACATATCTGCTCTAAGTCCTTCAAAAAAGTATCCATTAAAGAAATCGTTGGTGTCCAACACTGAAAACGATAGTGCCAAAGTTATAAAATTAGCGAAAGTTAAAGACTTAGAAACAAATAATAATAATAAGTCTGATGAAAGTTTAGAGTATATAAAATTGTCTGACAACAATGAAATCGCAGTCAACAATCAACCAAGAGTTCGTACGCCGATTTCTAATATTTCATACGTACCGACGGAAAGATCAACCAAACCGAAATACAATCGAAGCATCTCCAATGAAAATAATTCTTCTCCTCTGACTACCTCCCCTAGGTTCGAAAGGAATAGATTAAATAAATCACTCAATTTCGAAGCTCAGAAACTCGACCAACAAATTCTTGATATCCAAGACGGCCACCACTCATTGGGATACATTGATGAAGACACGCCCACTGACGAAGTGCAGTACAGTAAAAAACAAATCGAAAACCCTATCAAAACATTGCTGGCAAAGAACATAATGGACAGCCTACATTTAAAACCAAACAAGAAAGCGGGACCCAAAGCGAAACAAAGAATGGCAACAAAAGCCGACAGAACAAAAGAACTATTCAGGATATTTCCAAAAAAGGAAAAAACAACTGTGGTAGGCACTCACGCTGGTGGAACTATGGACGGTAGCAGAGTTCCGCCGCTAGGTCTCCCGAGATCGAATGATCACAACAATTGGGTAATAGTCGGCTATCCCGAAGTCGAAATGCTGATACCTCATTATAACGAAAGACTTGTGGCCACCGACAGCGACCTAAATCTAAAATCGAAGGACCAACCTGAACACGAAAATAACGACATCAAAAACAGCAGAGTAACCCCACCGCCTCAATTCCAAGACAAACAGAAAACCCCATACGAATCCCATACAAAAACCGACAAAAACTTAACACACGATTCGAAACGTGAAAAATTAAAGTTCCGAGAAGAAGATTTGAATTTTGCTGATGTACAATTAGATTTAGCGTGCATGTCGACCCCGAAAATGCTAGCTCCTGACGAGTTCATGAATGGAAGGAACAGCGGCAGACAGAACCAATCGCGTACCAATCTTATGACCGACTTCAACCGCAGCAGAGTGGTCCTGAATAACCAGAACGAGATCTTGTATAGAGAGAGGAGTATCGACCAAACCCAGTTAGAACGTCTCTGCGAGAGGAAACCGGAGCCCGTGCAACATTGGCTCTGTGACCTTATCGGGTCTTACGAGAGTGAATGCATGACGACGCTGCAGAGTAAACCCATAGGCGCGGAAATGAAGGCCATGGTATCCGCCAGCTCAGCCACCATCACGGGCAACATCAAAAAAGTCCAAACTCATGGACAGATCATCGTTCACCAGTACAGCGATGTGCTTAGACAAATCGAAGATTCGAAACCGAGCGAGGAACAAATATGTTTGTTGGTCGCAAACATCAATGAGTTCGTATTAGCTCACAGCATCACGCTGAACACGAAACCGCCCGGGGAGACTCCCGAGAGATGGGACAAGATAAAGAAGTCGCTGCAACTGTATTTGCAGAAACTAATAGACATAGGGGAAGATGTAAAGATCGAACTAAACGAAAGCAACGTCGAGTGGTACTTGGTATTGAAGCATCTGGACACTTTGATTGACATATTCTTGGAGACTACGAAGGCTGTTTTAATTCAGCAGATGAAGACTTTAGTGTCGATAATAGAAGAACCTCCATCGGACATGATCCTGAAGAGCACGCTCACTTCCATCGGGCACTTGGCGATGCTAAGCGAGCCGACCGAAAGCTCTCTTCACGAGAAGTGCTCCAAAATAATGAAGAGCATAACAGAGCTTCCGTTTGTTGACTGCGCTGTACCGAGAGCTTTATTGACAGCGATTATTGAAACAAATAAAAGCTCGATAAAAGCTTTGAGTTTGAGAGCTTTGGCGACCGTGTGTGTGACAGGAGACGCCGTCAAACAATTCGAAGAGGGTGGTGGTATTGAGATAATATCAGACATTCTCTCGGACCGGTCGAACCCGGAGCCGCAGATGCGCGAGGCGATCACCGTGCTCACTCAGATCACGGCGCCCTGGCTGAGAGGACATTACGATTTGACTCAATTACATTTATTCTTGGATAAAATCGTTGAAAACATTACTGGTATCTTGTCTCGCACCGATTGCTGCCAGCTACTGTTGCTGTGCACGGCCTGTCTCGTGAACTTGGTACGAGAGCTGGAGGTGGAGAAGCGAGACGGCGACCGCACCAAGTCCGACATCGTGGAGGTGATGGACAAACATCACACCGTCGAGAGGCTTCTGGACGCGGTGAAACGAAGGGGACCTTACATATCCGTGTTTTTGCAAGAGCAGACCGCGTCGCTGGTGTCGGTGCTGGCGGGCGTGCCGCGCTGCGTGCTGGCGCTGAGCCGCGCGGGGCGGGTGTGCGCGGCGCTGGTGTGCTTCACCAGGTCGCCGCCCTCGCCGCCCGCGCGCGCCGCCGAGCTGCGGGCGCAGACCCGCCTGCACTGCCACGCCACTGAAGCCATCGCTAGACTATCAGTGATACCAGACGTGGCGCACCAAATCGTCCAACTGGAAGGGGTGCCTCATCTAATCCGCTTGGTTAGATCGCAGAGGACACGCCCCCATCCGGAGAAAAATCCCGATCAAACTCTCATACACTGCCTCAAAGCTCTGAGGAACATCTTCAAGCACATCCCCGAAGCGTTCGAAGAATACCAAAAAGACGTACAAGAAATGATCCGACCTCATTTAATGGAGTCCCTAATGTTGTTTTCGGCCAAACAAGAAAGCTACGTTTAA
Protein
MSNFQRTRSKVWWGDSPPNLGSPVAQPAEWNRDNRTREEQQWEPQLPHWIANQPEQQRNNSADNIAQPNAQINQWPLRHGSPGSHKSQDSGFSDSDSSPPPSQYYAPPETNESNNKSSSSSDSNNNENVTIKHVEFVNTPQNVDVVDSSRTSPNNEVPTPKPRLRSSSVIQTPYDLQKYYEIHRDEEHMDLLKDKGPGEENKNEDENSHKKVNNDNLNKENTKPISSKNYKACNVLKNNNATLNKISNKELLSPIKHDTKEVPIKNISALSPSKKYPLKKSLVSNTENDSAKVIKLAKVKDLETNNNNKSDESLEYIKLSDNNEIAVNNQPRVRTPISNISYVPTERSTKPKYNRSISNENNSSPLTTSPRFERNRLNKSLNFEAQKLDQQILDIQDGHHSLGYIDEDTPTDEVQYSKKQIENPIKTLLAKNIMDSLHLKPNKKAGPKAKQRMATKADRTKELFRIFPKKEKTTVVGTHAGGTMDGSRVPPLGLPRSNDHNNWVIVGYPEVEMLIPHYNERLVATDSDLNLKSKDQPEHENNDIKNSRVTPPPQFQDKQKTPYESHTKTDKNLTHDSKREKLKFREEDLNFADVQLDLACMSTPKMLAPDEFMNGRNSGRQNQSRTNLMTDFNRSRVVLNNQNEILYRERSIDQTQLERLCERKPEPVQHWLCDLIGSYESECMTTLQSKPIGAEMKAMVSASSATITGNIKKVQTHGQIIVHQYSDVLRQIEDSKPSEEQICLLVANINEFVLAHSITLNTKPPGETPERWDKIKKSLQLYLQKLIDIGEDVKIELNESNVEWYLVLKHLDTLIDIFLETTKAVLIQQMKTLVSIIEEPPSDMILKSTLTSIGHLAMLSEPTESSLHEKCSKIMKSITELPFVDCAVPRALLTAIIETNKSSIKALSLRALATVCVTGDAVKQFEEGGGIEIISDILSDRSNPEPQMREAITVLTQITAPWLRGHYDLTQLHLFLDKIVENITGILSRTDCCQLLLLCTACLVNLVRELEVEKRDGDRTKSDIVEVMDKHHTVERLLDAVKRRGPYISVFLQEQTASLVSVLAGVPRCVLALSRAGRVCAALVCFTRSPPSPPARAAELRAQTRLHCHATEAIARLSVIPDVAHQIVQLEGVPHLIRLVRSQRTRPHPEKNPDQTLIHCLKALRNIFKHIPEAFEEYQKDVQEMIRPHLMESLMLFSAKQESYV

Summary

Uniprot
H9JIQ6   A0A2A4JC08   A0A2A4JDK2   A0A2H1V9V8   A0A0N1IN43   A0A437AXK1   + More
A0A212EPR3   A0A2A4JDK1   A0A0N1PI27   A0A0L7LS40  
Pubmed
19121390    26354079    22118469    26227816   
EMBL
BABH01032887    BABH01032888    NWSH01001996    PCG69481.1    PCG69482.1    ODYU01001435    + More
SOQ37617.1    KQ458751    KPJ05304.1    RSAL01000297    RVE42805.1    AGBW02013418    OWR43466.1    PCG69483.1    KQ459986    KPJ18837.1    JTDY01000207    KOB78290.1   
Proteomes
UP000005204    UP000218220    UP000053268    UP000283053    UP000007151    UP000053240    + More
UP000037510   
PRIDE
H9JIQ6   
Pfam
PF02538   Hydantoinase_B
Interpro
IPR016024   ARM-type_fold        + More
IPR039921   Inscuteable       
IPR038205   INSC_LBD_sf       
IPR011989   ARM-like       
IPR003692   Hydantoinase_B       
SUPFAM
SSF48371   SSF48371       
Gene 3D
1.25.10.10     3.30.30.160    
ProteinModelPortal
H9JIQ6   A0A2A4JC08   A0A2A4JDK2   A0A2H1V9V8   A0A0N1IN43   A0A437AXK1   + More
A0A212EPR3   A0A2A4JDK1   A0A0N1PI27   A0A0L7LS40  
PDB
5A7D     E-value=5.98504e-06,     Score=124

Ontologies

KEGG
101741429    no KO assigned | (RefSeq) uncharacterized LOC101741429
GO
GO:0008356   GO:0003824   GO:0005488   GO:0003899   GO:0006351   GO:0003676   GO:0006182   GO:0051603   GO:0030145   GO:0006412   GO:0016876   GO:0043039  
PANTHER
PTHR21386  

Topology

Length:
1205
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01434
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1205
 
 

Population Genetic Test Statistics

Pi
241.947655
Theta
163.605686
Tajima's D
1.053678
CLR
0.851895
CSRT
0.679666016699165
Interpretation
Uncertain
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