Gene

KWMTBOMO08429

Annotation

PREDICTED:_intracellular_protein_transport_protein_USO1-like_[Bombyx_mori]

Location

Bomo_Chr14(+):8891850-8893948      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.29

CDS

ATGGAGGTGCAAGAAAAATACGACTGGTTAGAAGGAGCAATCAAAGCAGCTATTCAACAAGGGACTAATAACAAAGACCTATCTAACAAGTGGATGACTACCAAAACAATCAACCTTCTCAAACAAAGAGCTAACTTAATTAAAGAAAAAAATAGTAACGATAATCGAAAGCAAATAGCAAAACTCAGCAAAGAAATTAAAGAAAGTATTAGAAAAGATAGAACTCAAAAAAGAATGGAAACAATAGAGAGACACATTTTACAAACAGGAGGTATAAAAAAGGCACATAAGGAATTATCAAACAAAAAGGACTGGATCGTACAGATGAAAGATAGTAATAGCTTGAAGGAAAATCGAAGGCAAGGAATATTAGGAATTGCTAGATCTTACTACAAGAAATTATATGAAAACAACATAGAGGAAAAAGAAATAGAGTTGTTGGAATTCTCATCCGTGCCCAGCATCATACAGGATGAAATAGAATTCGCTATAGAAACTCAAAGAGACAATAAAGCTCCAGGACCCGACAGAATAAGTAACGAAGTACTAAAACAAGCGAAACAAACAATAACACCTATTCTCAAAGAAATCTTCAACGATATCATCAACACAGAAACGATTCCCCAGCAATGGACTAAATCCAATATAATCCTTCTGTACAAAAAAGTATAA

Protein

MEVQEKYDWLEGAIKAAIQQGTNNKDLSNKWMTTKTINLLKQRANLIKEKNSNDNRKQIAKLSKEIKESIRKDRTQKRMETIERHILQTGGIKKAHKELSNKKDWIVQMKDSNSLKENRRQGILGIARSYYKKLYENNIEEKEIELLEFSSVPSIIQDEIEFAIETQRDNKAPGPDRISNEVLKQAKQTITPILKEIFNDIINTETIPQQWTKSNIILLYKKV

Uniprot

D7F179   A0A2W1BCS2   D7F176   A0A0L7L586   A0A2W1BNL4   A0A0L7K3E9   + More
A0A0L7L0N7   A0A0L7K3E2   D7F177   A0A023EXV2   A0A2H1WF27   A0A2W1BZV1   A0A2W1BGR8   A0A212FGG8   A0A0N5BPB7   A0A0N4W1J5   A0A0K0FAW8   T1HR22   A0A2W1B5F8   A0A2H1VBB6   A0A0L7K349   A0A0N5C0B1   A0A0L7LUV7   A0A0L7K2L1   A0A3P9HFJ3   A0A069DZM5   A0A0L7KTL6   A0A3P9LQX3   A0A016WIQ2   A0A0K0D495   A0A3D1L484   F1KYC2   A0A016VCK8   A0A016V6A2   A0A016UN79   A0A016T4J8   A0A016T590   A0A016TWQ1   A0A016X2C0   A0A016SPR9   A0A016VEC1   A0A016S403   A0A016U784   A0A016VCD9   W6NY38   A0A016VCU3   A0A016WCB8   A0A016ULU9   A0A016WPY4   A0A016VBP7   A0A016S2X6   G0MPL1   D7F157   D7F163   A0A016U9D0   A0A016W940   A0A016THC6   A0A016USW0   A0A016UKG5   A0A016WA86   A0A016SSP6   A0A016UC68   A0A016SBW4   A0A016SCW1   A0A016SGC3   D7F164   A0A016VX03   A0A016TL37   A0A016W5P9   W6NFR9   A0A016W4R1   A0A2H1VS24  

Pubmed

20470440    28756777    26227816    25474469    22118469    17554307    + More
26334808    25730766    30148503    21685128   

EMBL

FJ265564    ADI61832.1    KZ150485    PZC70710.1    FJ265561    ADI61829.1    + More
JTDY01002915    KOB70496.1    KZ150049    PZC74456.1    JTDY01012202    KOB52316.1    JTDY01003910    KOB68839.1    JTDY01014598    KOB52012.1    FJ265562    ADI61830.1    GBBI01004876    JAC13836.1    ODYU01008249    SOQ51673.1    KZ149907    PZC78256.1    KZ150191    PZC72397.1    AGBW02008673    OWR52827.1    UZAF01016124    VDO21057.1    ACPB03015413    KZ150317    PZC71439.1    ODYU01001637    SOQ38140.1    JTDY01016396    KOB51897.1    JTDY01000076    KOB79001.1    JTDY01014306    KOB52041.1    GBGD01000380    JAC88509.1    JTDY01005938    KOB66455.1    JARK01000254    EYC39481.1    DPCO01000033    HCE59365.1    JI167974    ADY42876.1    JARK01001348    EYC25145.1    JARK01001353    EYC22263.1    JARK01001370    EYC16376.1    JARK01001471    EYB97918.1    JARK01001473    EYB97806.1    JARK01001407    EYC07235.1    JARK01000011    EYC46025.1    JARK01001531    EYB92324.1    EYC25048.1    JARK01001639    EYB85201.1    JARK01001389    EYC11015.1    EYC25050.1    CAVP010061281    CDL96712.1    EYC25046.1    JARK01000388    EYC37469.1    EYC16150.1    JARK01000173    EYC41342.1    EYC25049.1    JARK01001647    EYB84687.1    GL379805    EGT39774.1    FJ265542    ADI61810.1    FJ265548    ADI61816.1    JARK01001387    EYC11218.1    JARK01000575    EYC35812.1    JARK01001438    EYC02111.1    JARK01001365    EYC18011.1    JARK01001373    EYC15347.1    JARK01000460    EYC36759.1    JARK01001517    EYB93530.1    JARK01001383    EYC12427.1    JARK01001588    EYB88110.1    EYB88109.1    JARK01001568    EYB89432.1    FJ265549    ADI61817.1    JARK01001340    EYC31303.1    JARK01001430    EYC03362.1    JARK01000732    EYC35149.1    CAVP010059184    CAVP010059185    CDL95610.1    CDL95611.1    JARK01001337    EYC34625.1    ODYU01004088    SOQ43598.1   

Proteomes

UP000037510    UP000007151    UP000046392    UP000038042    UP000268014    UP000035680    + More
UP000015103    UP000265200    UP000265180    UP000024635    UP000035642    UP000025227    UP000008068   

PRIDE

D7F179    D7F176    D7F177    D7F157    D7F163    D7F164    + More

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF06920   DHR-2
PF03372   Exo_endo_phos
PF01359   Transposase_1

Interpro

IPR005135   Endo/exonuclease/phosphatase        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR000477   RT_dom       
IPR027124   Swc5/CFDP2       
IPR010703   DOCK_C       
IPR020847   AP_endonuclease_F1_BS       
IPR039261   FNR_nucleotide-bd       
IPR001888   Transposase_1       
IPR029052   Metallo-depent_PP-like       

SUPFAM

SSF56219   SSF56219        + More
SSF52343   SSF52343       

Gene 3D

3.60.10.10     3.40.50.80     3.60.21.10    

ProteinModelPortal

D7F179   A0A2W1BCS2   D7F176   A0A0L7L586   A0A2W1BNL4   A0A0L7K3E9   + More
A0A0L7L0N7   A0A0L7K3E2   D7F177   A0A023EXV2   A0A2H1WF27   A0A2W1BZV1   A0A2W1BGR8   A0A212FGG8   A0A0N5BPB7   A0A0N4W1J5   A0A0K0FAW8   T1HR22   A0A2W1B5F8   A0A2H1VBB6   A0A0L7K349   A0A0N5C0B1   A0A0L7LUV7   A0A0L7K2L1   A0A3P9HFJ3   A0A069DZM5   A0A0L7KTL6   A0A3P9LQX3   A0A016WIQ2   A0A0K0D495   A0A3D1L484   F1KYC2   A0A016VCK8   A0A016V6A2   A0A016UN79   A0A016T4J8   A0A016T590   A0A016TWQ1   A0A016X2C0   A0A016SPR9   A0A016VEC1   A0A016S403   A0A016U784   A0A016VCD9   W6NY38   A0A016VCU3   A0A016WCB8   A0A016ULU9   A0A016WPY4   A0A016VBP7   A0A016S2X6   G0MPL1   D7F157   D7F163   A0A016U9D0   A0A016W940   A0A016THC6   A0A016USW0   A0A016UKG5   A0A016WA86   A0A016SSP6   A0A016UC68   A0A016SBW4   A0A016SCW1   A0A016SGC3   D7F164   A0A016VX03   A0A016TL37   A0A016W5P9   W6NFR9   A0A016W4R1   A0A2H1VS24  

KEGG

105841605    no KO assigned | (RefSeq) intracellular protein transport protein USO1-like

GO

GO:0003964   GO:0004519   GO:0006281   GO:0003677  

PANTHER

PTHR23227  

Length:

223

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10359

outside

1  -  223

 

 

Pi

3.323754

Theta

17.47468

Tajima's D

0

CLR

72.83979

CSRT

0.370581470926454

Interpretation

Uncertain