Gene

KWMTBOMO08426

Annotation

reverse_transcriptase_[Anopheles_gambiae]

Location

Bomo_Chr14(+):8807770-8811346      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.612 Nuclear   Reliability : 1.487

CDS

ATGCGCGCCCACTTTGGGGCTGTGGGGGGAGAAACAGGCGGCACAGGGCGTCGAGCAAGACTGCTTCGTAATTTTCAAGCGCTTGAGCCATCGCTGACACACATCACAGACCAGAACCTAGCCGACCGAGTTCGTTTCATAATGCGCTCTAACATCTTCAGCGCAAACGAACTCGAACAACTACGACTCGAGGCTGTTCCGGCCTCCTCTCTTGCACCAGCTGAAGGACGTGTGTCTATCGCATCTATGCAGGACTTAAATGTCGGCGGTGCGGTAGACACTGGTTATCAACCATTGGCTGCTGACGGAGGGGCGGACGGAATAGCTTCCCAGGACAACGAGCAGATCAGGAGGATTCTTGAAGAGGCGATTCTGGAAGTGCGTGAGATGCCTCTCGACGCGAGACCCCGGATCCCCAGAATAGCTCAGAGTCACCATAGTCGGAATGTCGTTGAGGCCGTTAACGAGATGCTGCTTCCATATTTGGAGAACAGCAGCAGCCTCACTGAAACGAATTCAATCCTGTTTGGCGCCGCAATGGCAGTATGTCGGTATATCGGCGCCAAGCTCCAGCCAAATCGGCAGGTGACAGCTGCCGACGCTCAGCGTGTGAGAGAAGCCGAGCCTGCTTGGAAGCGCAGAATTGAACGTCGTATCAGTGACGCTAGAGTCCTTATCGGCAAACTGATTAGCTTCAGGACGGGCAACACGAGGCCGAGAGTCTTGCGGTTTGTCAGAATTGCGTTTGCGGGGTGTGGCTTAGGCCCTGCAGTGCCAAATGCACAACAGCTGGCAGATCGCATAGACCTCCTGAAGCAGAAGGTGGCTGCTTGGAGCAAGCGCATCCGGCGGTACTCGGAACGAGTTCAAAGGTATCGCCAGAATCGCCTCTTCGTGAGTGATCAGAGGAAGTTCTACAGGTCCCTAGAACAGGCCAATGTTAGCGCCGTCACCGAACGTCCAGCTGGACAGGAGATGGTCACATTCTGGCGTAACTTGTGGTCAAGACCTGTGGAGCATGTGGAGGGCTCCTGGATGCAGGTCATTGAGGACTCGTGTGCGGGCATACCACCGATGAGCCCGGTTACTATCAGCAAAGGTGATATTAAGGCTGCAGTCTGTAGTTCTTCACACTGGAAGTCTCCAGGCTGCGACGGACTGCAGCTTTACTGGCTAAAAAGTTTCCGGGCTTGTCACGAAACCCTCGCCAGACAGTTCCAGGAAGCCCTAGATACAAAAGTGCTCCCCGCCTTCCTCACTACTGGGATCACTCACCTCATTCCAAAATCGGAAAGTACCGCGGATCCGGCACAGTACCGGCCAATAACGTGTCTTCCTACCACCTATAAGACACTGACATCCGTTCTGGAAACTAAGATCTCACACCACATAGACAGCTGTCGAGTACTGTCTGGTGCCCAGAACGGGTGTAGGCGTGGTAGCCGCGGTACTAAGGAACTCCTCTTGATCGACGCGGTAGCTGGCCAGCAGGTCAAACGCAACCGACGAAATTTCTCTGCCGCCTGGATAGATTATAAAAAGGCATTTGACTCGGTCCCCCATACATGGCTGAAGAGGGTCCTCGAGCTGTATAAGATAGACGATACAGTTCGAGACTTCCTCGGTGCCTGTATGGGGCAATGGAGTACAATGCTTAGTCTATCCGGTGTGCGGCTGTCGGCTGTAGAAGACCGAATAAAGGTGAATCGGGGTATATTTCAGGGTGATTGTCTGAGTCCATTGTGGTTTTGCCTGGCCCTGAATCCTCTCAGTTCATTACTGGAGGCTTCGAGGACAGGCTTTCAGTTCCGAAGGGGGGGCTTGAAGGTGTCCCACTTGTTCTACATGGATGACCTCAAGTTGTACGCTCCTCATGCTGCAGGCCTCAGGCGACTGCTTGACATCACTTGTGATTTCAGTAGTCGCATTAGGATGAGGCTGGGAGTCGACAAGTGTGCGGTTCTCCATGTAGAGAGAGGGAGCATAGTCTCATCGGATCGTTTACCTGTATCCGATGGGATAAACCTTCGGGCACTCTCCGAGGGAGAAACATACCGGTACCTGGGCATGTCGCAAAATTTAGGTATTGACGTGGCGGTCGTCAAACAGGCTGCATGCGACGTGTTTTGTGAACGTTTGACAAAAGTGTGTAAGAGCCTTTTGTCGGGCGTGAATAAGACAAGGGCGTTTAACGGCTGGGCGATGCCCGTCCTGTTGTATACCTTCGGCGTGCTCAGGTGGACTCTGACCGAACTGGATGCCCTGGATAGAAAAGTCCGCTCAATTATGAACCTCCATAGGATGCTCCACCCGAAGTCCTCGGTAATGAGATTGTACATTCCGCGGAAGTGTGGTGGCCGGGGCCTACTTAGCGCCAAGGTCATGCACAACAGTGGGGTGTGCAGTCTCAGGGAATATTTCCTATCGAGGGCTGACAGTGTGATGCACAGAGAGGTCATGGAATGCGACAAAGGACTGACCCCGCTAGCCCTGGCCAGAGACGGGTGGCAATCACCGGCGGTACTCAGTACCTCTGACCGTGAGGCCATATGGAAAGGGAAAGAGCTGCACGGACGCTTCTTTCAGGCACTGCATGAGCCCCACGTGGACAAAGAAGCCTCCGTGCACTGGCTGCGATTCGGTGACCTCTTTGGGGAAACCGAGGGTTTTGTCTGTGCAATACAGGATCAGGTTATCAGGACGAACAACTATAGGAAGCACATTCTGAGGGATGGGACAGCTGACATCTGTCGATTATGCCGCCGACCGGGTGAATCCCTCAGACATGTCACCTCTGGTTGTTCTATGCTTGCTAACACTGAGTACTTGCACAGACATAACCAAGCAGCCAGAATCCTCCACCAAGAGCTCGCCCTTAAGTATGGCCTCATCGAACAGAGGCTACCGTATTATAAGTACCAGCCGGACGCTGTACTCGAAAACGACCGTGCCAAGCTCTACTGGGACCGGCCCATCATTACGGACAGGACTATTCTTGCGAATAAGCCTGATATCGTGCTGATGGACCAGACGGAGTCTCGGGTATTTCTGGTGGATATCACCATCCCCTACGACGAGAACCTCGTGCGGGCCGAGGCAGATAAAAAGACCAAATATTTGGACCTGGCGCACGAGGTGACCGACATGTGGAGGGTGGTATCTACAGAAATAATCCCGGTAGTTGTGTCGGTGAATGGTTTGGTCCCTAAAAGCCTCTCAAAACATCTCGAGAGGCTTGGTCTCAACAAAAAGTCGGTGGTGGCCCAAATGCAAAAGGCAGTCTTGCTCGATAATGCCCGTATAGTTCGCCGGTTTCTCTCCCAATAG

Protein

MRAHFGAVGGETGGTGRRARLLRNFQALEPSLTHITDQNLADRVRFIMRSNIFSANELEQLRLEAVPASSLAPAEGRVSIASMQDLNVGGAVDTGYQPLAADGGADGIASQDNEQIRRILEEAILEVREMPLDARPRIPRIAQSHHSRNVVEAVNEMLLPYLENSSSLTETNSILFGAAMAVCRYIGAKLQPNRQVTAADAQRVREAEPAWKRRIERRISDARVLIGKLISFRTGNTRPRVLRFVRIAFAGCGLGPAVPNAQQLADRIDLLKQKVAAWSKRIRRYSERVQRYRQNRLFVSDQRKFYRSLEQANVSAVTERPAGQEMVTFWRNLWSRPVEHVEGSWMQVIEDSCAGIPPMSPVTISKGDIKAAVCSSSHWKSPGCDGLQLYWLKSFRACHETLARQFQEALDTKVLPAFLTTGITHLIPKSESTADPAQYRPITCLPTTYKTLTSVLETKISHHIDSCRVLSGAQNGCRRGSRGTKELLLIDAVAGQQVKRNRRNFSAAWIDYKKAFDSVPHTWLKRVLELYKIDDTVRDFLGACMGQWSTMLSLSGVRLSAVEDRIKVNRGIFQGDCLSPLWFCLALNPLSSLLEASRTGFQFRRGGLKVSHLFYMDDLKLYAPHAAGLRRLLDITCDFSSRIRMRLGVDKCAVLHVERGSIVSSDRLPVSDGINLRALSEGETYRYLGMSQNLGIDVAVVKQAACDVFCERLTKVCKSLLSGVNKTRAFNGWAMPVLLYTFGVLRWTLTELDALDRKVRSIMNLHRMLHPKSSVMRLYIPRKCGGRGLLSAKVMHNSGVCSLREYFLSRADSVMHREVMECDKGLTPLALARDGWQSPAVLSTSDREAIWKGKELHGRFFQALHEPHVDKEASVHWLRFGDLFGETEGFVCAIQDQVIRTNNYRKHILRDGTADICRLCRRPGESLRHVTSGCSMLANTEYLHRHNQAARILHQELALKYGLIEQRLPYYKYQPDAVLENDRAKLYWDRPIITDRTILANKPDIVLMDQTESRVFLVDITIPYDENLVRAEADKKTKYLDLAHEVTDMWRVVSTEIIPVVVSVNGLVPKSLSKHLERLGLNKKSVVAQMQKAVLLDNARIVRRFLSQ

Uniprot

A0A3S2LN57   W8BF34   A0A1S4EQ35   Q76IN5   W8AXW6   A0A2J7PIT9   + More
E0VSD9   E0W0M4   E0W0H3   E0VPK6   E0VPJ4   A0A2J7PDQ6   A0A3B3HW39   A0A3B3I0I7   A0A3P9MNJ5   A0A3B3H9G8   A0A3B3HQX9   A0A3P9K6Z6   A0A3P8NFL6   A0A3B3HU40   A0A3P8R5E8   A0A3P8Q3U1   A0A3P8PSV9   A0A3P8PU63   A0A3P9M4C8   A0A3P8QC13   A0A3P8QTM2   A0A3P8PST2   A0A3P9MMW4   A0A3P8NKM6   A0A3P8QK92   A0A3P8PUT7   A0A3P8QRC6   A0A3P8Q816   A0A3P9DUW1   A0A3P8Q8N4   A0A3P8P9Q9   A0A3P8P1I6   A0A3P8PIV2   A0A3P8NLS5   A0A3P8QJR1   A0A3P8P1Q8   A0A3B3ILW9   A0A3P8PQZ9   A0A3P8P8J8   A0A3P8NH43   A0A3P8PU69   A0A3P9LVD0   A0A3B3HQ99   A0A3P9QFG6   A0A3B3I5C9   A0A3B3H8G1   A0A3P8QPZ9   A0A3B3HNT5   A0A3P8QRQ3   A0A3P8NT65   A0A3P8NVY4   A0A3B5PPD0   A0A2P2HZD8   A0A3P8NRB8   A0A0S7ESG3   A0A3P8RI52   H3B0S5  

Pubmed

24495485    12949131    20566863    17554307    25186727    23542700    + More
9215903   

EMBL

RSAL01001347    RVE40825.1    GAMC01018221    JAB88334.1    AB097127    BAC82595.1    + More
GAMC01016897    JAB89658.1    NEVH01024955    PNF16260.1    DS235750    EEB16295.1    DS235861    EEB19180.1    DS235859    EEB19129.1    DS235366    EEB15312.1    EEB15300.1    NEVH01026385    PNF14463.1    IACF01001441    LAB67141.1    GBYX01473740    JAO07919.1    AFYH01092381    AFYH01092382   

Proteomes

UP000283053    UP000079169    UP000235965    UP000009046    UP000001038    UP000265180    + More
UP000265100    UP000265160    UP000242638    UP000002852    UP000008672   

Pfam

PF00078   RVT_1

Interpro

IPR000477   RT_dom        + More
IPR001611   Leu-rich_rpt       

ProteinModelPortal

A0A3S2LN57   W8BF34   A0A1S4EQ35   Q76IN5   W8AXW6   A0A2J7PIT9   + More
E0VSD9   E0W0M4   E0W0H3   E0VPK6   E0VPJ4   A0A2J7PDQ6   A0A3B3HW39   A0A3B3I0I7   A0A3P9MNJ5   A0A3B3H9G8   A0A3B3HQX9   A0A3P9K6Z6   A0A3P8NFL6   A0A3B3HU40   A0A3P8R5E8   A0A3P8Q3U1   A0A3P8PSV9   A0A3P8PU63   A0A3P9M4C8   A0A3P8QC13   A0A3P8QTM2   A0A3P8PST2   A0A3P9MMW4   A0A3P8NKM6   A0A3P8QK92   A0A3P8PUT7   A0A3P8QRC6   A0A3P8Q816   A0A3P9DUW1   A0A3P8Q8N4   A0A3P8P9Q9   A0A3P8P1I6   A0A3P8PIV2   A0A3P8NLS5   A0A3P8QJR1   A0A3P8P1Q8   A0A3B3ILW9   A0A3P8PQZ9   A0A3P8P8J8   A0A3P8NH43   A0A3P8PU69   A0A3P9LVD0   A0A3B3HQ99   A0A3P9QFG6   A0A3B3I5C9   A0A3B3H8G1   A0A3P8QPZ9   A0A3B3HNT5   A0A3P8QRQ3   A0A3P8NT65   A0A3P8NVY4   A0A3B5PPD0   A0A2P2HZD8   A0A3P8NRB8   A0A0S7ESG3   A0A3P8RI52   H3B0S5  

KEGG

105841841    no KO assigned | (RefSeq) uncharacterized LOC105841841

GO

GO:0003964   GO:0016021  

Length:

1108

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.19277

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00229

outside

1  -  1108

 

 

Pi

339.64061

Theta

173.371859

Tajima's D

1.884382

CLR

251.737411

CSRT

0.862656867156642

Interpretation

Uncertain