Gene
KWMTBOMO08423
Annotation
PREDICTED:_uncharacterized_protein_LOC106114667?_partial_[Papilio_xuthus]
Location in the cell
Nuclear Reliability : 2.333
Sequence
CDS
ATGGACCCGGATCCACAGACGTCATTTGACGTACGAAAATTAAATTTTAAAGTCCCAACATTTTCACCGGACGATCCTGAGATTTGGTTCGCATTACTTGAAGGACAGTTCGAAAACTTCGGCATAACTGACGACCATGCGAAGTTCAACCAAGTAATTACGAACTTGGATATCGTGCACGCCAAGGCCGTCAAGGATATTATCGTTAACCCTCCTGCAAGACACCGGTACGATAAGGTGAAATTCGAGCTCATCAAGCGTCTCACCGCCTCGCACGAGAACAAGGTCAGGCAGCTGCTGACACATGAGGAACTGGGTGACAGGAAAGCATCCCAATTTCTCCGACACCTGCAAGATTTAGCAGGACCGGATGTTCCAGAGGAGTTCCTGAGGTCGATTTGGAGCAACCGGTTACCGCCCAGCATCCAGACAGTACTGGCATCGCAGTCGTCTCAGAGGCTGGAGGACTTAGCAGAACTGGCAGATCGCATACAGGAGATAACGTCCCCACCTCAGCTTGCAGCAACGTCGGCGCAGGTTGTAGAAACGGGCAGCACTGGACCTGGCAGTACCGTATCGGGCGAAATCGCTGAGCTCAGAAAAATGGTCGAGCACCTCGCGCTCAAACTCGATGAGCACACCCGACGGTCCCGGCACCCTCGTAGAACCAACCCGCCGCAGCGACGCCGGTCAAACTCGCGCAGTTCAACTCGTTCAGCTTCAATGTACCGCCGCTTCCCAATTTGTTGGTACCACTCCAAGTTCGCGTCGAGGGCACACAAATGCCAAAAGCCATGTCGCCTTTTCGTCAAAGATCGCGGAACGAAAATGCAGTTTCTGGTCGACACGGGTAGCGACCTCTGTGTTTTCCCCCGATCTCAACTACAAGAGCGTCGAGCATCCACCTCTTACAAGCTGATGGCGGCCAACGGAACTACAATTAACACATATGGGTATGTGCACCTGACGTTGGATTTCGGACTCCGTCGTAGCTACCCATGGCGTTTCGTGGTGGCTGATGTCACCAAATCTATTATAGGTGTTGATTTTCTGGCGTATTATAACCTTATTGTAGATTGTAAATGTAAAAAATTAATTGACAACACTACCACTCTCTCTGCTCCAGCTTCACTGGCTAGTAAATCTAATTCAATTTTGTCTGTAAAAGTTCATACTGGTGACACACATTACCATCAATTACTTTCGCGAGAATTTCCTGAAGTCACACGTCCGGCTGGTACGCAGCGTAGCATTCCACACAACACTCAACACCATATACGCACCACACCTGGTCCTCCCGTGTCGTGTGCGCCTAGACGTCTTGCTCCCGACAAGCTAAAGATCGCGAAAGCCGAATTTGAAGCGATGCTAGCAAACGGCACCGCTAGGCCGTCGGAGAGCCCTTGGTCGTCCCCATTACATCTGGTCCCTAAGAAGGACAACGGGTGGCGTCCATGTGGCGACTATAGAAAACTCAACGCTCGCACAATACCGGATATGTACCCCATCAGACATTTACATGATTTCACACATAACATTGCAGGTTGTCGTGTATTCAGCACGATCGATTTGGTAAAAGCCTACAACCAAATCCCCGTATTTGAAGAGGATGTACCGAAGACGGCTATAACCACCCCGTTTGGAATGTTTGAATTCCCATTCATGAACTTTGGACAAAGAAATGCGGGTCAAACATTCCAACGCTTTATCGATGAGATGATGCGTGGCCTTGATTTCGTCTATTGTTTCATCGATGACTTTTTAATTTTTAGCAGAGACGAGGCCCAGCATGAACATCACCTCCGACAAGTGTTCAGCAGGCTCAAAGACTATGGAATGGTCATAAATGCTTCCAAGTGTGTTTTCGGAGCTCCTGAAGTAACCTTCTTGGGTTACTGTGTATCGGAGAGCGGCACCAAGCCCTTGGAAGACAAAGTACGTGCCATACTTGACTTTCCCCCACCTCAGAACGTTAAGACACTGAGAAGATTTCTCGGCATGGCCAATTTTTATCGGCGTTTCTTGCCCAAGGCCGCCGAAATCCAAACCCCTCTTAACGCTCTTCTCACTGGGTCAGTAAAAGGGTCCACGCCCATCAGTCTCATCGGCGACGCTCTGAAGGCTTTCGAAGACCCAAGAAAAGCCTCTCCAATGCAGCTCTTTTGGCTCACCCAAAATGGATTTAGGTATTGCCTGACGGCCATTGACCGATTTACACGGTGGCCCGAGGTCATACCAATAGTAGACATCACTGCAGAAACGGTGGCTAAAGCACTAATATCCGGCTGGATATCCAGATTCGGTGTACCAATTGATATTGTCACAGACCGCGGACGACAGTTCGAGTCCGCACTGTTTCAATATTTGTCAAAAGTATCGGGTTTCCAGCATAAACGCACCACCGCCTATCATCCAGCGTGCAACGGACTCGTGGAACGCTTCCACAGACAGTTAAAAGCGTCCATAACGTGCCACGCTGACTCCAACTGGTCCGAAGTACTGCCGTTGGCACTCCTCGGCATTCGCAGTGCCTTCAAAGAGGATTTACAATCCTCCCCCGCCGAATTACTGTATGGCGAACCGCTCAGACTACCGGGAGAATTTTTCGATTCGAGCACACCTACAACATCCGATGTAACAGATTTCACGGCGCGCCTACACATGATCGTCCAAAAGCTGAAACCAGTCCCAGCTTCACGTCATGGCAAGCACACTGTCTTTATTCATAAAGAACTGGAGTCCACTCAGCATGTCTTCCTCCGTGAAGACGCTGCACGACCTCCCTTCCACCCAGCATACTCGGGACCGTACAGGGTGCTCACTAGAGGAGACAAAGCCTTTAAGATATTGGTTAAAGAGAAACCAGTATCCGTTTCAGTAGATCGCCTTAAACCCGCTTTCATACTGGCAGACGATAGGAGTACACAAGGGAAGAATATACCTCAACCACTACCTGCTTCAAAACCACCAATTACTAATCGTGATCTGCCGTCTCCAAAATCTAGCCCATCTTTAACTCCTACATCCAAAATAACACGTTCGGGACGACGGGTACGATTCCCAGATTATTATCGCCCCTAA
Protein
MDPDPQTSFDVRKLNFKVPTFSPDDPEIWFALLEGQFENFGITDDHAKFNQVITNLDIVHAKAVKDIIVNPPARHRYDKVKFELIKRLTASHENKVRQLLTHEELGDRKASQFLRHLQDLAGPDVPEEFLRSIWSNRLPPSIQTVLASQSSQRLEDLAELADRIQEITSPPQLAATSAQVVETGSTGPGSTVSGEIAELRKMVEHLALKLDEHTRRSRHPRRTNPPQRRRSNSRSSTRSASMYRRFPICWYHSKFASRAHKCQKPCRLFVKDRGTKMQFLVDTGSDLCVFPRSQLQERRASTSYKLMAANGTTINTYGYVHLTLDFGLRRSYPWRFVVADVTKSIIGVDFLAYYNLIVDCKCKKLIDNTTTLSAPASLASKSNSILSVKVHTGDTHYHQLLSREFPEVTRPAGTQRSIPHNTQHHIRTTPGPPVSCAPRRLAPDKLKIAKAEFEAMLANGTARPSESPWSSPLHLVPKKDNGWRPCGDYRKLNARTIPDMYPIRHLHDFTHNIAGCRVFSTIDLVKAYNQIPVFEEDVPKTAITTPFGMFEFPFMNFGQRNAGQTFQRFIDEMMRGLDFVYCFIDDFLIFSRDEAQHEHHLRQVFSRLKDYGMVINASKCVFGAPEVTFLGYCVSESGTKPLEDKVRAILDFPPPQNVKTLRRFLGMANFYRRFLPKAAEIQTPLNALLTGSVKGSTPISLIGDALKAFEDPRKASPMQLFWLTQNGFRYCLTAIDRFTRWPEVIPIVDITAETVAKALISGWISRFGVPIDIVTDRGRQFESALFQYLSKVSGFQHKRTTAYHPACNGLVERFHRQLKASITCHADSNWSEVLPLALLGIRSAFKEDLQSSPAELLYGEPLRLPGEFFDSSTPTTSDVTDFTARLHMIVQKLKPVPASRHGKHTVFIHKELESTQHVFLREDAARPPFHPAYSGPYRVLTRGDKAFKILVKEKPVSVSVDRLKPAFILADDRSTQGKNIPQPLPASKPPITNRDLPSPKSSPSLTPTSKITRSGRRVRFPDYYRP
Summary
Uniprot
EMBL
LBMM01010268
KMQ87563.1
KQ972957
KXZ75711.1
KN538457
KHJ40029.1
+ More
AAGJ04088930 AY013563 AAK07485.1 KL367631 KFD61211.1 KQ971745 KYB24749.1 AY013569 AAK07487.1 DF142933 GAA49140.1 AY013565 AAK07486.1 KL367543 KFD65158.1 KL367544 KFD65142.1 KL367778 KFD59660.1 AAGJ04000250 LBMM01012451 KMQ86215.1 HE601625 CCD77521.1 ABLF02057446 ABLF02059301 KL367515 KFD67383.1 EF426679 ABP48077.1 KL367564 KFD63920.1
AAGJ04088930 AY013563 AAK07485.1 KL367631 KFD61211.1 KQ971745 KYB24749.1 AY013569 AAK07487.1 DF142933 GAA49140.1 AY013565 AAK07486.1 KL367543 KFD65158.1 KL367544 KFD65142.1 KL367778 KFD59660.1 AAGJ04000250 LBMM01012451 KMQ86215.1 HE601625 CCD77521.1 ABLF02057446 ABLF02059301 KL367515 KFD67383.1 EF426679 ABP48077.1 KL367564 KFD63920.1
Proteomes
Pfam
Interpro
IPR012337
RNaseH-like_sf
+ More
IPR041577 RT_RNaseH_2
IPR001584 Integrase_cat-core
IPR000477 RT_dom
IPR036397 RNaseH_sf
IPR001995 Peptidase_A2_cat
IPR041588 Integrase_H2C2
IPR021109 Peptidase_aspartic_dom_sf
IPR001969 Aspartic_peptidase_AS
IPR041373 RT_RNaseH
IPR034132 RP_Saci-like
IPR041426 Mos1_HTH
IPR018289 MULE_transposase_dom
IPR041577 RT_RNaseH_2
IPR001584 Integrase_cat-core
IPR000477 RT_dom
IPR036397 RNaseH_sf
IPR001995 Peptidase_A2_cat
IPR041588 Integrase_H2C2
IPR021109 Peptidase_aspartic_dom_sf
IPR001969 Aspartic_peptidase_AS
IPR041373 RT_RNaseH
IPR034132 RP_Saci-like
IPR041426 Mos1_HTH
IPR018289 MULE_transposase_dom
Gene 3D
ProteinModelPortal
PDB
4OL8
E-value=7.06313e-52,
Score=519
Ontologies
GO
Topology
Length:
1026
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0225899999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00070
outside
1 - 1026
Population Genetic Test Statistics
Pi
112.847448
Theta
11.093727
Tajima's D
3.103994
CLR
0.109014
CSRT
0.982450877456127
Interpretation
Possibly Balancing Selection
