Silkworm Genome Informatics Database

Gene

KWMTBOMO08419

Annotation

PREDICTED:_uncharacterized_protein_LOC101738890_[Bombyx_mori]

Location

Bomo_Chr14(-):8500027-8503092 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.84

CDS

ATGCTACGTCAAAAAATCATTCAACCCTCTATCTCACCATGGTCAGCACCTATATGGGTAGTACCAAAAAAACAAGACTCCTCCGGTAAACCTAAGTGGCGTATTGTTATCGACTATAGGAAGTTAAATCAAGTAACAATTGGTGATGCCTATCCTATTCCGAACATCACGGATATCCTGGACCAGCTAGGCCACAGTAAATACTTTACCACTCTTGACCTCGCGTCTTCGTTTCATCAAGTCAAGGTGAAAGATACCGAAAAAACAGCATTTAGTGTGCCCTCGGGCCATTACGAGTTCACGCGTATGCCTTTTGGTCTTCGAAATGCTCCTTCCACATTTCAAAGACTCATGAATATAGTACTAAGCGGCCTTCAAGGCACTCATTGCTATACATATTTAGATGATATAGTCGCTTTCAACCACGATCTCTTGTCTCATTGTCAAAACCTCAGAAACATATTTCATAAGCTCCGTGAACACAACCTAAAATTACAACCGGACAAATGTGAGTTCTTTCGTCGAGAAGCACAGTATCTTGGACATATTATTTCAGATAAAGGAGTAATGCCTGACCCCAAGAAGGTTCTCTGTGTTACTAACTTCCCAGTTCCGAAGTCTCCACGTGATATAAAATCATTTCTAGGTTTAGTTGGTTATTATCGTCGCTTCATTGAAAATTTCTCCCATATTACTAAAGCTTTAACTAGCCTTCTAAAAAAGGACGCTACGTTTCAATGGGGTTGTGAACAACAAAAAGCCTTCGACGAACTGAAAAACAAAATAACCTCGGCTCCTATCCTTCAGTACCCTGATTTTACTAAACCCTTCGTACTAACAACAGACGCATCCAATTACGCTGTTTCTGCTATTCTTTCTCAAGGCGAAGTAGGTCAAGATCTCCCAATAGCCTTCGCATCTCGAACCCTGAACAAATCAGAAGGAAATTATTCTACAACCGAAAAAGAATGTTTAGCTATCATTTTCGGCACAAAAGTTTTCAGACCTTATCTGTATGGACACAAGTTTAAAATCGTGACCGATCATAAACCTTTGCAGTGGCTATTTAACTGCAAAGACCCCGGTTCTAAGTTAGTTAGGTGGAGGTTAAAATTAGAAGAATTCGACTACGAGATTGAATACAAAAAGGGGAAGTTAAATTGTAACGCAGATTCCTTATCTCGCAACCTCGTTCATACTCTCGATGAACCAACCGTTTTACAACCACCCCCATACCTTGATGAACAGTCTCGAGTAGATGAGCCCCTTACGTTCGATGACTTGTCTCCGTTACCACCCCCCATAGACTTCAACGCCCCAGGTTCCGTCCCTTCAGAAACCCCTCTTGGACAAGAAATGCCTAGCCACCCTACTCAACCTCCTACAAAAGTCCCTTCTCCATCACTGCCCTCGCAACCGTCACCGTCAACTCCTGAAACCTATGAACAATATCTAAAAGTGTCCCGACAATCGAAAGATCCGTTTAACACAAATATTCAGGAATTTAACGACTCTCTACTTAAAGCTAAATGTAAGCTGATAGCCTACCCTACCTCAATTGACCTTGATGAGTCTGTACCATATTGTTCAGAAATCATAGAAATGTCCACAACTATGCCTGACATACGTGAAGTGGAGAGAGAACTGTACTCATTTTATTCTACCGGTAACGCCAGTCATTTATTTACACATTTGTTTGTCCGTGTTCATTTTTACGATGAGTTTACGTATAAAGATATTTTTAATGTTTTACGTTGTTACCGTGACATGATAACTACATGGTATAGCGAGGAAAAAGAATGTGCTATATCAGATTTCTCAGACCCTTACACGAAATTGTCATTTACAAAAATTTACAATATCGTTGCGTTTCTATTTCATGACACTCAAATCAAAGTAAATATTTACCATAACAATATCCAATATCCTACGCCTTCCGAAATCAAAAAAATATTAAGAGATCACCATGATTCCACGACTGCAGGTCACCCCGGAGTCGCTCGTATGTTAGGACGAATAAAAGAACTATATTGGTGGAAAAATATGCGACAAGACATAGAAAACTATGTCAAAAATTGCAAATCGTGCCAAATAAACAAACCGCTGCGCCAAGTTAATCGCTCCCCAATGATAATCACGTCTACCGCCACTAGAGCTAATGAAAAGTTATTCCTAGATTTAGTGGGGCCATTACCCGAAACACACCATAACAAATTCAAATTCATTCTTACGTTACAAGACGATCTCACTAAATATTCTCAAGCATATCCCATGGTCACATGCTCCGCCGAAGAAACAGCTCGTTCATTAGTAAAGTATATCTCCCATATCGGTATCCCTAAGATCATTATTACAGATCAAGGTGCTAACTTCTCTTCCGAAGTAATGAAGCAGTTAGAGCGTTTATTCGGAATAAAACACATTTTTGCTTCTCCATATCACCCGCAGACTTGTGGCGCCCTAGAAAGAAGTCATTCGACTCTGAAAGAATATCTTAGGTCGTATATAGTTGAAAACCAACATACATGGGACTTATATCTTAGAACAGCAATGCTAGCGTACAATTCCAATATCCACTCTACCACAGGCTTTTCACCATTAGAACTGTTATTCGGGTTTAAACCCTACATCCCTAAAAGTATAGACTCTCTCGACCTTAATACATACAGCGATTATATAAGAGCACTTAATCACCGGTTATATTACAGCCGTCAAAAAGCTTTACAAAATATAGAGTCGTCAAAAGAAAGATCAAAAAAATACTACGACTCTCACTCGAAACCGATTACCTATAATATTGGTGACATGGTCTACGTCCGTTGCCATCATAAGCAAAACAAAGCCTTATCTCCTGTATGGAAGGGTCCATACAAAATCATAAAAATAAACGGCAACCACACGGTCACCTTATTAATGAACCGTAAACACGTGCGTCACCATTATGATGAAATAAAATTAGCAAATGACGACGCACTATAG

Protein

MLRQKIIQPSISPWSAPIWVVPKKQDSSGKPKWRIVIDYRKLNQVTIGDAYPIPNITDILDQLGHSKYFTTLDLASSFHQVKVKDTEKTAFSVPSGHYEFTRMPFGLRNAPSTFQRLMNIVLSGLQGTHCYTYLDDIVAFNHDLLSHCQNLRNIFHKLREHNLKLQPDKCEFFRREAQYLGHIISDKGVMPDPKKVLCVTNFPVPKSPRDIKSFLGLVGYYRRFIENFSHITKALTSLLKKDATFQWGCEQQKAFDELKNKITSAPILQYPDFTKPFVLTTDASNYAVSAILSQGEVGQDLPIAFASRTLNKSEGNYSTTEKECLAIIFGTKVFRPYLYGHKFKIVTDHKPLQWLFNCKDPGSKLVRWRLKLEEFDYEIEYKKGKLNCNADSLSRNLVHTLDEPTVLQPPPYLDEQSRVDEPLTFDDLSPLPPPIDFNAPGSVPSETPLGQEMPSHPTQPPTKVPSPSLPSQPSPSTPETYEQYLKVSRQSKDPFNTNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVERELYSFYSTGNASHLFTHLFVRVHFYDEFTYKDIFNVLRCYRDMITTWYSEEKECAISDFSDPYTKLSFTKIYNIVAFLFHDTQIKVNIYHNNIQYPTPSEIKKILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDIENYVKNCKSCQINKPLRQVNRSPMIITSTATRANEKLFLDLVGPLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKALSPVWKGPYKIIKINGNHTVTLLMNRKHVRHHYDEIKLANDDAL

Uniprot

A0A2S2NNZ3 A0A2S2QW04 X1WLD3 J9KPM2

EMBL

GGMR01006290 MBY18909.1 GGMS01012487 MBY81690.1 ABLF02011604 ABLF02041632 + More

Proteomes

UP000007819

Pfam

PF00665   rve        + More
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF17921   Integrase_H2C2
PF12259   Baculo_F

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR000477   RT_dom
IPR041588   Integrase_H2C2
IPR036397   RNaseH_sf
IPR001584   Integrase_cat-core
IPR041577   RT_RNaseH_2
IPR012337   RNaseH-like_sf
IPR002589   Macro_dom
IPR022048   Envelope_fusion-like
IPR001878   Znf_CCHC
IPR036875   Znf_CCHC_sf

SUPFAM

SSF53098 SSF53098 + More
SSF57756 SSF57756

Gene 3D

2.40.70.10 3.30.420.10

ProteinModelPortal

A0A2S2NNZ3 A0A2S2QW04 X1WLD3 J9KPM2

PDB

4OL8 E-value=1.5325e-68, Score=663

KEGG

NA

GO

GO:0003676 GO:0015074 GO:0008270 GO:0004383 GO:0006182 GO:0016491 GO:0051603 GO:0030145 GO:0006412 GO:0016876 GO:0043039

Length:

992

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00706999999999999

Exp number, first 60 AAs:

0.00035

Total prob of N-in:

0.00027

outside

1 - 992

Pi

26.884037

Theta

59.122136

Tajima's D

-1.718864

CLR

109.76402

CSRT

0.0354982250887456

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree