Silkworm Genome Informatics Database

Gene

KWMTBOMO08397

Annotation

PREDICTED:_protein_king_tubby_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr14(+):7666916-7669277 View in EpiBrowser

Full name

Tubby-like protein

Location in the cell

Nuclear Reliability : 3.317

CDS

ATGGCATCAGTAAACGTTCGTGATCAAAAAATCGAACAGCAACGTCAGTTGATGGAACTTAAAATGAAACAGAAAAGGCAGAATTCAGGAATGGTTCAAGCAAACGATTTAAGAGTAGGGTCAGCAAAACGGCCCATATCAGGTAGTCGTAGCCGGGAACTACATGAACTCGGAAATCAAATAGAAGTATTAACTATTGATGATGACAACAGTGGTGAAGAGGAAGAAGAGAGTGTGCCAGTGTGTAGTGTCGGACGGGATGCAAGTACAGATGATATATGTGCTGATGCTGCAGTGGCACCAATGCAGGCCAGGATACCAAGGAGAGACGATTCTCCTAGTCAGGGTGAAATGTCGAACAGCTAA

Protein

MASVNVRDQKIEQQRQLMELKMKQKRQNSGMVQANDLRVGSAKRPISGSRSRELHELGNQIEVLTIDDDNSGEEEEESVPVCSVGRDASTDDICADAAVAPMQARIPRRDDSPSQGEMSNS

Similarity

Belongs to the TUB family.

Uniprot

A0A0N1IA75 H9JIE3 A0A212EZS5 A0A2A4IVB0 A0A0N1I4Z2 A0A437BCH4 + More
A0A0L7L9Y2 A0A1W4WS32 A0A0A9YWK1 A0A0K2TPE0 A0A0P6GYB7

Pubmed

26354079 19121390 22118469 26227816 25401762 26823975 + More

EMBL

KQ459986 KPJ18864.1 BABH01022424 AGBW02011232 OWR46998.1 NWSH01005826 + More
PCG63907.1 KQ459256 KPJ02092.1 RSAL01000089 RVE48125.1 JTDY01002071 KOB72180.1 GBHO01006207 GDHC01014982 JAG37397.1 JAQ03647.1 HACA01010161 CDW27522.1 GDIQ01027306 JAN67431.1

Proteomes

UP000053240 UP000005204 UP000007151 UP000218220 UP000053268 UP000283053 + More
UP000037510 UP000192223

PRIDE

H9JIE3

Pfam

PF01167 Tub

Interpro

IPR025659   Tubby-like_C        + More
IPR000007   Tubby_C
IPR018066   Tubby_C_CS

SUPFAM

SSF54518 SSF54518

Gene 3D

3.20.90.10

ProteinModelPortal

A0A0N1IA75 H9JIE3 A0A212EZS5 A0A2A4IVB0 A0A0N1I4Z2 A0A437BCH4 + More
A0A0L7L9Y2 A0A1W4WS32 A0A0A9YWK1 A0A0K2TPE0 A0A0P6GYB7

KEGG

101744687 no KO assigned | (RefSeq) protein king tubby

GO

Length:

121

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.54607

inside

1 - 121

Pi

172.437739

Theta

165.265001

Tajima's D

0.534321

CLR

1.661656

CSRT

0.529773511324434

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics