Gene

KWMTBOMO08381

Pre Gene Modal

BGIBMGA009214

Annotation

PREDICTED:_uncharacterized_protein_LOC105387907_[Plutella_xylostella]

Location

Bomo_Chr14(-):7145027-7148561      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.759 Nuclear   Reliability : 1.659

CDS

ATGCAGATGCTGTCAGATAAGTATGACGATATCCAAAGGGAACTGGCTAAAAAAGAGCGTAAGGATAATCTATCTTACATAAAGCTGCTGGAATCAAAATTGGAAAACGTCGAAAACAAATCGTGCGCCTCCAGGATTGAGATACGTAATATTCCTCAGGACGAATATGAAACTAAGGAACAGCTGGTTACTACTGTGCTGGATATTGGTGCCATTATCGGTGTCCAGGTTGGTGCCCACAAGGTGAGGGATGTTTTCCTCACCACGAAACTAAATACCACTAAACCGATCTTGGTTGAATTTACATCAGTAATCCTGAAGGAGAAATTTATGAAAGCAGTCAAGGCTCTTAATAGAAAGGAGGACGGAAAATTGAACACTGTGTTCAAACTTAACGTCCCCCCTAAACCTATATACATATCTGAGTTCCTGACTTCCAAAGGTAGGAGGCTCTATTTCCTGGCTCGTGATTTAGCTAAATCCCATGGATTCGCTTTTTGTTGGTCTTTGTTCGGTAGCTCAGTAAAAGCGATTCTCATAAGATATGATTTGTGGGAATACGCTAGTGGTGAAATAACGTTAGCGGCAACTACGACTGCCGAAGAAAAGAGTGCGTTCCTAAAGGAAGACTTAAAGGCAAGTTTCTGTGGAAAAAGTGAACATGTTCGTAACAGATGCTTTAAGCTCAGGAAACAGAAGAAAGAGGAGGCTGAGAAAGCTACAATTGCGACTGATTGTGCCTATTCAGTGACACAGATGACTTCATAG

Protein

MQMLSDKYDDIQRELAKKERKDNLSYIKLLESKLENVENKSCASRIEIRNIPQDEYETKEQLVTTVLDIGAIIGVQVGAHKVRDVFLTTKLNTTKPILVEFTSVILKEKFMKAVKALNRKEDGKLNTVFKLNVPPKPIYISEFLTSKGRRLYFLARDLAKSHGFAFCWSLFGSSVKAILIRYDLWEYASGEITLAATTTAEEKSAFLKEDLKASFCGKSEHVRNRCFKLRKQKKEEAEKATIATDCAYSVTQMTS

Uniprot

A0A0L7LG99   A0A1E1W9J6   A0A2H1X0Z6   A0A3S2NCL6   A0A194R4A1   A0A1E1WQT7   + More
A0A0L7KX00   A0A2A4JIS1   A0A0L7KVZ1   A0A0L7KW40   A0A0L7K5M6   A0A0L7KV77   A0A0L7LSD9   A0A0L7LVW8   A0A2A4IX07   A0A2A4IX81   A0A0L7KUE5   A0A0L7LM45   A0A0L7L6E2   A0A0L7LEV3   A0A2A4JBR2   A0A0L7L0V7   A0A0L7KQ79   A0A2A4JL66   A0A2A4JK29   A0A0L7K3U4   A0A0L7LQH0   A0A0L7L1J8   A0A0L7LEU2   A0A0L7LEV4  

Pubmed

26227816    26354079   

EMBL

JTDY01001320    KOB74211.1    GDQN01007376    JAT83678.1    ODYU01012581    SOQ58989.1    + More
RSAL01000098    RVE47641.1    KQ460779    KPJ12349.1    GDQN01001706    JAT89348.1    JTDY01004938    KOB67579.1    NWSH01001240    PCG71995.1    JTDY01011983    JTDY01005169    KOB52353.1    KOB67295.1    JTDY01005031    KOB67453.1    JTDY01010474    KOB58189.1    JTDY01005410    KOB67040.1    JTDY01000185    KOB78395.1    JTDY01000002    KOB79524.1    NWSH01006037    PCG63722.1    PCG63723.1    JTDY01005560    KOB66883.1    JTDY01000601    KOB76500.1    JTDY01002644    KOB71022.1    JTDY01001508    KOB73701.1    NWSH01002094    PCG69206.1    JTDY01003831    KOB68941.1    JTDY01007545    KOB65124.1    NWSH01001083    PCG72711.1    NWSH01001156    PCG72321.1    JTDY01012015    KOB52344.1    JTDY01000313    KOB77743.1    JTDY01003535    KOB69383.1    JTDY01001361    KOB74078.1    JTDY01001411    KOB73935.1   

Proteomes

UP000037510    UP000283053    UP000053240    UP000218220   

Pfam

PF13359   DDE_Tnp_4        + More
PF04869   Uso1_p115_head
PF18770   Arm_vescicular
PF00152   tRNA-synt_2

Interpro

IPR027806   HARBI1_dom        + More
IPR012337   RNaseH-like_sf       
IPR036397   RNaseH_sf       
IPR016024   ARM-type_fold       
IPR041209   P115_Arm_rpt       
IPR006953   Vesicle_Uso1_P115_head       
IPR011989   ARM-like       
IPR002312   Asp/Asn-tRNA-synth_IIb       
IPR004364   aa-tRNA-synt_II       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR004244   Transposase_22       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       

SUPFAM

SSF53098   SSF53098        + More
SSF48371   SSF48371       
SSF56219   SSF56219       
SSF57903   SSF57903       

Gene 3D

3.30.420.10     1.25.10.10     3.60.10.10     3.30.40.10    

ProteinModelPortal

A0A0L7LG99   A0A1E1W9J6   A0A2H1X0Z6   A0A3S2NCL6   A0A194R4A1   A0A1E1WQT7   + More
A0A0L7KX00   A0A2A4JIS1   A0A0L7KVZ1   A0A0L7KW40   A0A0L7K5M6   A0A0L7KV77   A0A0L7LSD9   A0A0L7LVW8   A0A2A4IX07   A0A2A4IX81   A0A0L7KUE5   A0A0L7LM45   A0A0L7L6E2   A0A0L7LEV3   A0A2A4JBR2   A0A0L7L0V7   A0A0L7KQ79   A0A2A4JL66   A0A2A4JK29   A0A0L7K3U4   A0A0L7LQH0   A0A0L7L1J8   A0A0L7LEU2   A0A0L7LEV4  

KEGG

101736913    no KO assigned | (RefSeq) uncharacterized LOC101736913

GO

GO:0048280   GO:0000139   GO:0006886   GO:0006418   GO:0004812   GO:0005524   GO:0046872  

PANTHER

PTHR11505  

Length:

255

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.5928

Exp number, first 60 AAs:

0.00043

Total prob of N-in:

0.10359

outside

1  -  255

 

 

Pi

174.477297

Theta

180.258724

Tajima's D

-0.200109

CLR

2.781346

CSRT

0.308034598270087

Interpretation

Uncertain