SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08378
Pre Gene Modal
BGIBMGA009287
Annotation
Uncharacterized_protein_OBRU01_08256_[Operophtera_brumata]
Location
Bomo_Chr14(+):7082602-7085172      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.35
 

Sequence

CDS
ATGAAGTGTTGTGAAAAAATGAATTCGAAATTTCTGATTGCTTCCGCCGGCTGTTCAGAAGATAATGCTGCAATTGCTTCTTTACCTCAGTTGGTAGGTCCAAAAAATAGTGGTCCTATTTTAGGAACCTGTTTGGAGGCACTAGAAAAAAAACACCAAAAAGTTCTTGACATGATCGCTTCTGAAGCAGCGAAAATAAACGAAAGTGTAGATGTTGAAATTAGGATTATTTCAGAAAATTTAGTAGAGCATATTAAACAAAATCAAAATGATATTAACTCAGTAATCTCTAATTGTGATACCGAGGAAGGTGAGTTATCCAAAGACGACCACGACAAAGCATTGTATCTTGTTAATAATTTAATAAACGTGCGTATTGGTGAGATTGAACGATTTAAGGACGAAGCTTTGAAGTTAGAAAGAAAACGAGCTAACGCACTTCAAGTAATATTACGAGATAAATTTGAACAATTAATTAGTATCGGGCATTGTGCACCAAAAACATTGCTACACGATTTCGATGGCAGAATATACGAAATTAATCAGCAGCTACTTAGCAATAATAGAGCTTACACAGAATTAGAGGCATCACTACGTGTTCAGGCTGATGAAAGTAAATTACGTGGGCGATCTTCCCTAAAGCTGTTAAAACTTGACGTATCGATACTTTCGAGAAAGCAAAGAAGCACGCTCTTTCACAGCGGAAAAACAGTTTTACAAGGCAGGTCTAGCAATGTTGATCGAAAAAGTACTGCCTCGGTACAATCAACCGGTCGGATATTTGACAGTATTGATATTTTTGAAAAGTGCGTATCTCGTATGGTACAAGCCTATAAAACTGCACTCATAAACGTTTTTGTTGGTTTTTCTCGTAAGTTGGAAGATCTCGGAAACGATATCTACCGACATGAAATAATTCTGGATAAAGACTACGGACGTGAAATTTTAGATATTCAGCCATTAATTGAACGAACTTTACGTCATTTATCCAACAGCGTGTTCGAAAAATCTGAACATCATAGTGAATTTAAGGAATCTACAGAAAAGGACGTAGTTATGATGCAGAAAAGCCTCATATCATTAGGAAACAGTCTCCGTCACACATATGCTATATTGCATGATGCTGGACATCTTTACGATACTCATATATTAAGATCGGCAATTGCCCAAAAACTCACAATAGTAGCAGTAGAAGATCTTTTAACTAGTAATGATATTTTGCAATTATCAAGTGAAGTAACTTTTAACATTAATTTAGAACAGATGCGCTGCGCTCCAGATCTAGACAAACTTCAAGTACTCTATAATACACAGGTTGCAGCACTTGAACGTATCGGAGAATCGTATCGACATCATAGTGAATCTGAAATCTGTCGACTCGAGGAATTTATGAATCTTCAGCCGTATTTGTCAAAGTGTTTAATTCTAGAGTACAATTACTTTTTGCATAAATACACGGGATCTAATCATAAAACTATACATACTCCAGAGCAAATATCAAATCCTGTGAGTTATCGCGGTAATGCAGAAATACCACGTGCCATTTTACAAAGTGCACTACACGAAGTAAGTCTTCAAAATTGGAAGAATGGTTTTCTCGAAACCTTTAGAACTAGTGTTGACTTGATTCCAAAAGAACTAAACCTTCAGGCTCTGTTGTGGGTTCGTGAGCGTGTAGCGGTATTACAAAGGAGATATTCAGTAAAAAACAGATTACACAATATTCGTTTAGAAAGAATAACAGCTGTTCGTGACGCGCGTTCTGCTGAATTATGTTTCCATCAGGAACGCCTCAATTCACATTTGGATGCAATCAATAAATTAATTGAAACTCTACCTGTCGTAGCCGCTGAATGCTGTAAACTAGACTCTCCTGAATTATACCCTTTACAAAAAAATGTAACGAAAATGCAAGCAGATTTAGATCATTTGATGACAAAAGATACAATTGGTCATGAAGTAAAAAAACTTAAAACCAAGAGCTATGCAGCTCGTTTGACAAATTATCTAGAATGTTTTCAAAAATCTCTTGACGAGGTAATAGAAATGAATAGAATGTCCCTTGAACGGCAGGTTCAGGAGGTTCGCATATCTAATGTTAGATTCATGTCAGGAATAAAGCTCTTCCATGAAGGTGGCCGATTTGCTGTGGCAGAAGCCACTCGGACCAGTAATTTTTTAGTCAAGGCCTCAGACGCACTGGAGTTATGTTTAAATCGATCAAAAGAAATTATCAACCAGCGTCGTACACAGCTACTTTCTTGGGCCGAACAAAACATTTTACAACTTAAAAAAGTATTCGATGAAGTCTTAAAGACTAATGGCAAACCAGGAATGGACCGAAAAAAAACACCTTACACAAAGAAAATGTAG
Protein
MKCCEKMNSKFLIASAGCSEDNAAIASLPQLVGPKNSGPILGTCLEALEKKHQKVLDMIASEAAKINESVDVEIRIISENLVEHIKQNQNDINSVISNCDTEEGELSKDDHDKALYLVNNLINVRIGEIERFKDEALKLERKRANALQVILRDKFEQLISIGHCAPKTLLHDFDGRIYEINQQLLSNNRAYTELEASLRVQADESKLRGRSSLKLLKLDVSILSRKQRSTLFHSGKTVLQGRSSNVDRKSTASVQSTGRIFDSIDIFEKCVSRMVQAYKTALINVFVGFSRKLEDLGNDIYRHEIILDKDYGREILDIQPLIERTLRHLSNSVFEKSEHHSEFKESTEKDVVMMQKSLISLGNSLRHTYAILHDAGHLYDTHILRSAIAQKLTIVAVEDLLTSNDILQLSSEVTFNINLEQMRCAPDLDKLQVLYNTQVAALERIGESYRHHSESEICRLEEFMNLQPYLSKCLILEYNYFLHKYTGSNHKTIHTPEQISNPVSYRGNAEIPRAILQSALHEVSLQNWKNGFLETFRTSVDLIPKELNLQALLWVRERVAVLQRRYSVKNRLHNIRLERITAVRDARSAELCFHQERLNSHLDAINKLIETLPVVAAECCKLDSPELYPLQKNVTKMQADLDHLMTKDTIGHEVKKLKTKSYAARLTNYLECFQKSLDEVIEMNRMSLERQVQEVRISNVRFMSGIKLFHEGGRFAVAEATRTSNFLVKASDALELCLNRSKEIINQRRTQLLSWAEQNILQLKKVFDEVLKTNGKPGMDRKKTPYTKKM

Summary

Uniprot
H9JID7   A0A2W1BN62   A0A2H1X3F9   A0A0L7LHV2   A0A212EJH4   A0A0N1IEP1   + More
A0A194PY48   A0A1W4X1T9   E0VX03   A0A139WAZ8  
Pubmed
19121390    28756777    26227816    22118469    26354079    20566863    + More
18362917    19820115   
EMBL
BABH01022363    KZ150057    PZC74306.1    ODYU01013139    SOQ59829.1    JTDY01001045    + More
KOB75027.1    AGBW02014472    OWR41625.1    KQ461193    KPJ07015.1    KQ459585    KPI98266.1    DS235824    EEB17909.1    KQ971379    KYB25095.1   
Proteomes
UP000005204    UP000037510    UP000007151    UP000053240    UP000053268    UP000192223    + More
UP000009046    UP000007266   
PRIDE
H9JID7   
Pfam
PF14643   DUF4455        + More
PF01395   PBP_GOBP
PF06602   Myotub-related
Interpro
IPR026701   CCDC180        + More
IPR028089   DUF4455       
IPR011993   PH-like_dom_sf       
IPR030591   MTMR8       
IPR003595   Tyr_Pase_cat       
IPR006170   PBP/GOBP       
IPR029021   Prot-tyrosine_phosphatase-like       
IPR010569   Myotubularin-like_Pase_dom       
IPR030564   Myotubularin_fam       
IPR036728   PBP_GOBP_sf       
IPR016130   Tyr_Pase_AS       
SUPFAM
SSF47565   SSF47565        + More
SSF52799   SSF52799       
Gene 3D
1.10.238.20     2.30.29.30    
ProteinModelPortal
H9JID7   A0A2W1BN62   A0A2H1X3F9   A0A0L7LHV2   A0A212EJH4   A0A0N1IEP1   + More
A0A194PY48   A0A1W4X1T9   E0VX03   A0A139WAZ8  

Ontologies

KEGG
NA   
GO
GO:0052629   GO:0005549   GO:0046856   GO:0010506   GO:0004438   GO:0004725  
PANTHER
PTHR21444:SF14   PTHR10807:SF36   PTHR10807  

Topology

Length:
790
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01739
Exp number, first 60 AAs:
0.01533
Total prob of N-in:
0.00227
outside
1  -  790
 
 

Population Genetic Test Statistics

Pi
297.116109
Theta
223.66881
Tajima's D
1.044216
CLR
0.052947
CSRT
0.673466326683666
Interpretation
Uncertain
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