SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08377  Validated by peptides from experiments
Annotation
PREDICTED:_toll-interacting_protein-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.307
 

Sequence

CDS
ATGCCTAATGATACAAATGAAGAACGTCGTCGTAGAGTACTGCTAGGTCCTCTTCCAGCAGGTTTTCTTCGTGCTGATGCTACTTCTGACGGTGTGGACTCTGATTATGAAGCTGCACTTGCTTTACAACAACAGCTATATGGTGCTGCAGTACCACAAAGTGGCCCTCCAATGACAGCGAGACTAAGTGTCACTATAGCTCAAGCTAAGCTTGTTAAAAATTATGGACTAACTCGTATGGACCCGTATGTTCGTGTGCGTGTTGGACATTGTATATACGAGACTCACACTGATCCGAGCGGCGGGAAGACTCCGAGATGGAACAAGGTCATTCACTGTCTCCTACCACCCGGTGTGAATACAATATATTTGGAGATCTTTGACGAGTGCTCATTTACAATGGACGAGCTGATTGCTTGGACCCACATCACTATACCGCAGGCCGTTTTGAATGGTGAAACTCACGAAGACTGGTACCCCCTGAATGGAAAACAAGGGGACGGCTTGGAAGGGATGATCAATCTTGTAATGAGCTATTCAGTCGGTCCGGCGGCGGTAGCCTCGTTCCCGCCGGTGTTGGTGGTGCCGAGCACCGGCATGGGGTACGCCGCCATGCCCGTGTACCCCGCCCCTCAGGCGCCGCACCCACCCCCCGCTCAGCCCGCACAGCCGCCCGTCACCGCCGAGCAGTTGCAGCAGATTGAAGAAATGTTCCCGAGCATGGACAAGGAAGTCATCAAGTCGGTTCTGGAAGCAAACGGTGGTAACAAAGACGCCACCATCAATTCTCTACTTCAAATGTCGGAATAA
Protein
MPNDTNEERRRRVLLGPLPAGFLRADATSDGVDSDYEAALALQQQLYGAAVPQSGPPMTARLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKTPRWNKVIHCLLPPGVNTIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEDWYPLNGKQGDGLEGMINLVMSYSVGPAAVASFPPVLVVPSTGMGYAAMPVYPAPQAPHPPPAQPAQPPVTAEQLQQIEEMFPSMDKEVIKSVLEANGGNKDATINSLLQMSE

Summary

EMBL
MH200925    AXS59135.1    ODYU01002829    SOQ40797.1    NWSH01005458    PCG64201.1    + More
KZ150057    PZC74305.1    RSAL01000021    RVE52542.1    GDQN01005264    GDQN01004677    JAT85790.1    JAT86377.1    AGBW02010576    OWR48254.1    KQ459585    KPI98264.1    KQ461193    KPJ07013.1    BABH01022351    BABH01022352    BABH01022353    GEBQ01026660    JAT13317.1    MF379616    AWJ58418.1    KQ971338    EFA01564.1    KK852794    KDR16420.1    NEVH01003749    PNF40127.1    PYGN01002080    PSN31565.1    GEZM01025499    JAV87430.1    GBHO01029289    GBRD01006899    GDHC01017751    JAG14315.1    JAG58922.1    JAQ00878.1    GECZ01011746    JAS58023.1    DS234991    EEB09979.1    ACPB03007727    EU282116    ABZ80666.1    KZ288439    PBC25738.1    JR051860    AEY61576.1    GANO01000516    JAB59355.1    LJIG01022551    KRT79976.1    GDKW01002049    JAI54546.1    GFDF01004407    JAV09677.1    GL442209    EFN63773.1    APCN01003252    AXCM01007069    AXCN02000242    AJWK01009578    GFDG01000880    JAV17919.1    AAAB01008888    EAL40603.3    GECL01001215    JAP04909.1    GFTR01004246    JAW12180.1    GBBI01003240    JAC15472.1    AAZX01003552    NNAY01003423    OXU19435.1    GBYB01015290    JAG85057.1    GAKP01021289    GAKP01021285    JAC37663.1    GL888327    EGI62734.1    GDHF01020983    JAI31331.1    GBXI01003913    JAD10379.1    KQ980447    KYN16003.1    GL447585    EFN86309.1    GGFM01004175    MBW24926.1    ADTU01015424    KQ976574    KYM80101.1    KQ414670    KOC64442.1    KQ434857    KZC08864.1    KQ981387    KYN41977.1    GGFJ01008304    MBW57445.1    ADMH02001227    ETN63579.1    LBMM01000855    KMQ97364.1    GGFK01007056    MBW40377.1    KQ982294    KYQ58332.1    GDHF01023437    JAI28877.1    KQ435826    KOX71979.1    GAMC01018519    GAMC01018517    JAB88038.1    ATLV01026525    KE525415    KFB53157.1    KB632345    ERL93062.1    APGK01020248    APGK01020249    KB740187    ENN81170.1    GL763877    EFZ19227.1    BT128654    AEE63611.1    KQ976973    KYN06654.1    GDAI01000509    JAI17094.1    EZ423178    ADD19454.1    CCAG010018854    JXJN01026856    ADFV01129570    ADFV01129571    ADFV01129572    ADFV01129573    ADFV01129574    AQIB01077175    AQIB01077176    AQIB01077177    AQIB01077178    AQIB01077179    AHZZ02006164    ABGA01004878    ABGA01004879    ABGA01004880    ABGA01004881    ABGA01004882    ABGA01004883    ABGA01004884    NDHI03003604    PNJ16499.1    AY730683    AK315592    CR533477    CH471158    AAX22229.1    BAG37964.1    CAG38508.1    EAX02433.1   
Pfam
PF02845   CUE        + More
PF00168   C2
PF13181   TPR_8
PF13176   TPR_7
Interpro
IPR041799   TOLIP_CUE        + More
IPR000008   C2_dom       
IPR035892   C2_domain_sf       
IPR037301   Tollip_C2       
IPR003892   CUE       
IPR009060   UBA-like_sf       
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
IPR033053   Hir3/CABIN1       
IPR013026   TPR-contain_dom       
SUPFAM
SSF46934   SSF46934        + More
SSF48452   SSF48452       
Gene 3D
PDB
1WGL     E-value=3.23528e-09,     Score=145

Ontologies

Topology

Length:
269
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.03419
Exp number, first 60 AAs:
0.00545
Total prob of N-in:
0.26040
outside
1  -  269
 
 

Population Genetic Test Statistics

Pi
24.720997
Theta
181.085469
Tajima's D
0.782996
CLR
0.263793
CSRT
0.6003199840008
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 VGGAAIDVFEQEPPTDPVTIEIIQQPAVIATPHIGASTK 100.00 2e-06
25044914 VGGEEFEAIMR 100.00 2e-06
28467696 VGGYIIGEFGNIIAGDTR 100.00 2e-06
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