SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08365
Pre Gene Modal
BGIBMGA009225
Annotation
PREDICTED:_myotubularin-related_protein_5_[Bombyx_mori]
Full name
Myotubularin-related protein 13      
Alternative Name
Inactive phosphatidylinositol 3-phosphatase 13
SET-binding factor 2
Location in the cell
Nuclear   Reliability : 2.015
 

Sequence

CDS
ATGTCCAGGCTCGTCGACTACTTTGTTATAGTGGGATTCGACCACGAAAAAGAAAGAGGCGGCCTGAACAGCGGCGTTGTCCTCCAGCGATTTCCCGAAACAAACTGGGACGACGTACCATTTCACGACGGCATAGGATGGTTTTGTCAGCCGCAAGGATGGGCTCTATCGACGGAACGAACGGAGCCGCGGTTCTACGTGTCTGTGCTGACGGACGTGGACGCGAACCGTCATTACTGCGCTTGTTTGTGCTTCAACGAAACTGTTGCCATCACGCCAACGAAACCCGCAGACGAGGACGAAGAGTCCCTAGATTCCTCAAGACCCGTAGCAAACATCACACATCACAGCATTATGTACGCGCCGAAATGTCTTGTTATAGTTTCACGTCAGGACTACATAGATACCTTCAGGAACTGCTTAGGCATAATATACACTGTCTGGGTAGAGAATCTGGGCGTGCCTCTCGAGACGCTTGTCGGTAATCTGGTGGGTGGCGTGTTAGTACCTGAACCAGGGGGACCGCAGGTGCGCTTCAGTATCGGTGCCGGGGACCGACAGGCTCTACAGCCGCCCGCTGCACCGCCCATGCCGGTTACACACACCTCCGTTTACATGCTGCTTCGGCTGTTAGGTATACACAACGCAGTGACGCTGTGGTGTGCAGTAATGAGCGAGCACAAGGTGTTGCTCGTGTCGCTGGCGGCGGCCCGGCTCGCCGGCGTGTGTCGGGCGCTGGCGGCCCTCATGTTCCCGTTCCGATACGCGCACGTGTACATACCGCTGCTGCCCGCCGGCCTGGCCGAAGTCCTGGCGACGCCGACGCCCTTCCTCATTGGCGTACATTCTAATTTAAAAGAGGATGTTTCCGAATTGCTAGACGTCATAGTAGCGGACTTAGACGTCGGCTCTCTCCACATTCCAGCGGGTGTGAACATTCCACGACCGGAAGGCAAGCTGTTGTCGTCGCTGCAGAACGCGTTAGCTCTGGTGTTGCAGCCGGAACTGCGTTCGGCGGATTCGGCCTTCGCCCCGCCGCCGCCCTCCGCCTCGCCGCCGCACATGCTAGACAAGGAAATCAGGGCGGTGTTCATGAGGACCTTGGCGAAACTGTTACAAGGCTACAGACACTGCCTGACGCTGGTCCGCATCCACCCGGCCCCGGTGCTGACGTTCCACAAGCTGGGGTTCGTGGGGGCGCGCGGGCTGGCGCAGTGCGAGTTCACGGCGCGACTGCTCGACTCCATGTTCTTCTCCGGACTCGTAGCTGAACGAGGCCCTCCATGGAGACCGGTCGACCTCTTCGACGACTTGCTACAAAATCTCCCGGAACAACTAAGACTAGAATCTCTGAATCCCGAATTGGAACTACAACATATACAGGATCTCGCGATGCAGTTACATCTCAACGAAAATCCTAATCCGCAGCCGTTTCAGCAAAGAATACTCCGTCCGCCAGAGGGCGCGTCCTCCCGCATCCACCAGCCCCCCCTCCCCGCCATCGACGCGCGGAAGGTGCGTGACGTCATGGACGAGGTCTCGGCCAGAAGTGCCAATAATCCCAAGTTAACAGCACTCCGGCCGCCTCAGCCCAGGATAGTTTCGCTGTCAGCCCCTCCGACGGGAGCCGTGGAGCACAACCAGCTGCCGCCCACTAATTCGGCCAGGAGACTCGAGGTGCTGAGCGCGTGCGTGGCGGCCATATTCGAGTGCCGGTACGCAGATGGGCGCAAGTCGGTGGCGGGCGTGGTGCGCGCGCTGCGTGCGCCGGCCGCGCGCGCTGCGCTCGTGCGGGACCTCGCCGCCCGCCTGCCCACCAACAAGCACCTGCTGCACCACCACCAGTTCGAGCTCGTCGTCAGATTAATGAACTGCGCCTTGCAATCGACAACGGCCATAGACGAGCACTCGATAGCGGCGGCCATGTTGCCGCTCGCGACCGCCTACTGCAGGAAACTCTGCACCGGAGTCATTCAGTACGCGTACATGTGCATACAGGAACATCCGGTATGGACGAGTCAACAGTTTTGGGAGGCGGCTTTCTATCAAGACGTGCAGAAGGATATAAAAGCGTTGTACTTACCCAGTCCTACACATCACCCAAGAGTCCCTACTCCAAGGGACGACGAAGATTACATATCTTTACTGAAAGCTCAAGAGCCGAGCGCTTTAGAGATAGCAGCTGAACAGATGAGATTATGGCCGAGTTTGTCACCAGAGAAACAAAAAGAACTAATAGCAAGCGAGGAATCGACTTTATACAGTCAAGCGATACACTATGCGAACAGAATGGTTTACTTGTTACTGCCGCTAGAGGGCGCCGGGAGGAGAGCCGATGTCCGAGGCGACGATGTCGACAGAGCCAGCAATAGTATCACCAACAGTGTCGCAGAATCAGACAGCGTGGACGCCGAATCAGGCTTCGAGGAGGCCGACCCGGGGGAGGCAGGCAATAACGTTATCAAAATGGTCTCGAGATTCGTTGATAAGGTGTGCACCGAGGGCGGCGTGACGGCGGAGCACGTGCGCTGCCTGCACCAGATGATCCCGGGCGTGGTGCACATGCACCTGGAGACGCTGGACGCCGTGGCGCGCGAGAGCCGCCGCCTGCCCCCCGTGCAGAAGCCGCGCATCGTGTCTCCGGTACTGGTGGGCGGCGAGGCGGTGTCGGGCCCGGCCCTGCGCGCCTACCTGGTGTGCGACGGCCGGCCCTCCTCGCTGCTGCCGGCGGAGGGCGCGCTCTTCCTCACCAACTACAGACTCATTTTCAAGGGAACGCCCACCGACCCTTTCGCTTGCGAGCAAACAGTAGTTCGTTCGTTCCCTTTGTGCTCGCTGACGAGGGAGAAGGCGATACGGACGCACTACATACCGCATCTAGAACAATCGCTGCAAGACGGCCTGCAGCTCAGATCCGCAACATTCCAACTCATTAAGGTAGCTCTAGACGAGGAGGTGAGCAGCGAGCTGACGGAGAGCTTCCGCAAGCAGCTGGCGCGGCTGCGGCACCCGGAGCACCCGCTGCTGCACTTCGCGCTGACGCCGCGCCCCGTGCCGCCGCCCGCGCACCACCAAGCCAAGCACAACACTTTAAAAGGTTTCGCGAAGAAGACCTTATTGAAGACAGCAAGGAAGGCCGGCTTGAAACCCAAACCTTCGAAACGGCAGAAGTACGTGTTGCCTTCGGCGGACGCGAGGTCACTCACCTCTCCCCCACTCATGTCTTCGTTATCCGCTGACACTCTATCGTTGGAAGAGTTAGATCTTGGTAGCAGTGAACCGACGGAAGCTCCCGCAGCCCGGACGCTGGAGAGGGTTCGGGAACGTATCTACGCTAAAGATTGGGCCAGACTGGGGTTGGCCTCACCGCCCTTCAGACTCGCGCATGCTAATGCTGTGTACACTCTTTGTAGAAGTTACCCGGCAGTGATCCCGGTCCCGGAGAGCATCGGCGACGAGTCGCTGCGGCGCGTGGCGCGCTGCTACCGACAGGGCCGCCTGCCGCTCGTCACGTGGCGACACCCGCGCACGCACGCGCTGCTCGCCAGGTCTTCGGCGTCACATCACAAAGGAGTGATGGGTATGCTGAAGGCTACCCATCAAACCCAGGGTACCACCCAAAGTGGAACGGAGACTACATCCAGCTTAGAACAGGAGCGGTACATAGCAACCCTAGTGGCGTGCACTCCGGCGTCGCGAGGCGACCTCGAGGACTCCAGCCTGAGCTTAGACTCGCTCCTGTTGTGCTGCGATGAACAGCAGCCTACCCACACGCCTTTGTTGACCAAGGCCGCCGGGACGCTGAGCGTGCTACGTAACAGCGGAGGGAAGGGCGGCGGCACCAGCGGAGGCCGAGCCTTCGGTCGCTGGGGCTCGCTCAAGGACCGGAGACAACCCTCGCACCTCGAGCTGTACGCGCCCAGACAGAGACTCTCCACGGCGGACCTCGACTCCATGTCGGCCGAGGGCGGCGTGACGCGGCGCGCGGCGCTGTACGTGGTGGGCGAGAAGGGGGCGGGCGCGGGGTGCGCGGCGGGCGCGGAGGCGGTGCCGGCCGACTACCCGGAGACGCGACACACGCGGCACGCCTTCAAGAAGCTCATGCGGTGCGCCGTGCCCTCCGCGCCCGCACTCGACCCCACCACCTTCCTCAGACAAGTGGAAGAGTCTGGCTGGTTGTGGCAGCTCCGACAATTGTTTCAACTGTCTGGTGCTGTGGTAGACTTGTTAGATGTGCAAGGTTCATCTGTGCTGTTGTCCCTGGAAGACGGATGGGATGTCACTGCACAGATATCATCGTTAGCTCAGATCTGCCTGGAGCCCTACTACAGGACGCTGGAGGGGTTCCGGATCATCGTCGAGAAGGAGTGGCTGGCCCTGGGGCACAAGTTCCAGCAGCGGTGTAACATCGGAGCCACACCGCAACAAGGCTTCACACCCACATTCCTCATGTTCTTGGATGCCGTACATCAGCTACAGAAACAGTTCCCGCTGGCGTTCGAGTTCAACGAGTACTACCTGCGGTTCGTCGCGTACCACAGCGTGTCCTGCCGCTTCCGGACCTTCCTGCTGGACAGCGAGGCGCAGCGCGCGGAGCTCGGCATCACCGCGGCCGACGACAAGCGCGCCGACACCAACCGACTCGGCGTGGAGACGGGTGCGGGGGTGGAGGAGGAGGCGGGCGGGGGGCGCGGGCCGCCGCTCGGCCACTCGCTGTTCGACTACATCGACAAGCAGCACCAGAAGTCGCCCGTCTTCTACAACTTCCTCTACACGCCCGACCTTGACAATCCCGTCCTTCGTCCTGTTTCGTCTATATGCGCATTTGAAGTATGGGGCTACTACACCAGCGAGGAATTGTCCCACGGAGCTCCCTACGACTTGGAAGTGTTGTCGTCCTGCGAACAGGACGTGAAACAACCGCAGAGGAGGGTCGTCACTGCTGGGTACGACAGTATAAGTCGTTGCATGCCGGACTCGTTTACCGGTCTGCTGGAGAGGATCCGGCAGCTAGAACTGGAGCTGGGTCACCTACCTCAGAAGTGGAAGGTCAGATGGGATCAGCTCGAACTACCCAACACTGTGGAGCTTCAGCGCGCGGGCTCCGTGTGCGGGTCGGCGGCGCGCGCGGCGGCCGCGTGTGCGCACCGGCGGGACACGCTGGAGGTGCTGGTGCGGGGCCGCCTCGCCGCCGCGCCGCCCCCCGACCCCGCGCACCGCTTCCTGCCCGCCGCCGCCGCCGCGCCCGCGCGCTGCGACCACTGCCACCACCTGCTCTGGGGACCGCTCAAGACGGGCGTTCGTTGCGTGGACTGCGGCGCCGCGTGTCACGAGCGATGCGCGGAGACGTTCGCGCCGCCCTGCACCAAGTACAAGGCGCCCGCGCCCCCCGACCGCGACCTGCGCCCCGCCCTGCACGACAGTACGACACACGCTCATACCCTGCACTCTCTATACATTCAGTGCTAA
Protein
MSRLVDYFVIVGFDHEKERGGLNSGVVLQRFPETNWDDVPFHDGIGWFCQPQGWALSTERTEPRFYVSVLTDVDANRHYCACLCFNETVAITPTKPADEDEESLDSSRPVANITHHSIMYAPKCLVIVSRQDYIDTFRNCLGIIYTVWVENLGVPLETLVGNLVGGVLVPEPGGPQVRFSIGAGDRQALQPPAAPPMPVTHTSVYMLLRLLGIHNAVTLWCAVMSEHKVLLVSLAAARLAGVCRALAALMFPFRYAHVYIPLLPAGLAEVLATPTPFLIGVHSNLKEDVSELLDVIVADLDVGSLHIPAGVNIPRPEGKLLSSLQNALALVLQPELRSADSAFAPPPPSASPPHMLDKEIRAVFMRTLAKLLQGYRHCLTLVRIHPAPVLTFHKLGFVGARGLAQCEFTARLLDSMFFSGLVAERGPPWRPVDLFDDLLQNLPEQLRLESLNPELELQHIQDLAMQLHLNENPNPQPFQQRILRPPEGASSRIHQPPLPAIDARKVRDVMDEVSARSANNPKLTALRPPQPRIVSLSAPPTGAVEHNQLPPTNSARRLEVLSACVAAIFECRYADGRKSVAGVVRALRAPAARAALVRDLAARLPTNKHLLHHHQFELVVRLMNCALQSTTAIDEHSIAAAMLPLATAYCRKLCTGVIQYAYMCIQEHPVWTSQQFWEAAFYQDVQKDIKALYLPSPTHHPRVPTPRDDEDYISLLKAQEPSALEIAAEQMRLWPSLSPEKQKELIASEESTLYSQAIHYANRMVYLLLPLEGAGRRADVRGDDVDRASNSITNSVAESDSVDAESGFEEADPGEAGNNVIKMVSRFVDKVCTEGGVTAEHVRCLHQMIPGVVHMHLETLDAVARESRRLPPVQKPRIVSPVLVGGEAVSGPALRAYLVCDGRPSSLLPAEGALFLTNYRLIFKGTPTDPFACEQTVVRSFPLCSLTREKAIRTHYIPHLEQSLQDGLQLRSATFQLIKVALDEEVSSELTESFRKQLARLRHPEHPLLHFALTPRPVPPPAHHQAKHNTLKGFAKKTLLKTARKAGLKPKPSKRQKYVLPSADARSLTSPPLMSSLSADTLSLEELDLGSSEPTEAPAARTLERVRERIYAKDWARLGLASPPFRLAHANAVYTLCRSYPAVIPVPESIGDESLRRVARCYRQGRLPLVTWRHPRTHALLARSSASHHKGVMGMLKATHQTQGTTQSGTETTSSLEQERYIATLVACTPASRGDLEDSSLSLDSLLLCCDEQQPTHTPLLTKAAGTLSVLRNSGGKGGGTSGGRAFGRWGSLKDRRQPSHLELYAPRQRLSTADLDSMSAEGGVTRRAALYVVGEKGAGAGCAAGAEAVPADYPETRHTRHAFKKLMRCAVPSAPALDPTTFLRQVEESGWLWQLRQLFQLSGAVVDLLDVQGSSVLLSLEDGWDVTAQISSLAQICLEPYYRTLEGFRIIVEKEWLALGHKFQQRCNIGATPQQGFTPTFLMFLDAVHQLQKQFPLAFEFNEYYLRFVAYHSVSCRFRTFLLDSEAQRAELGITAADDKRADTNRLGVETGAGVEEEAGGGRGPPLGHSLFDYIDKQHQKSPVFYNFLYTPDLDNPVLRPVSSICAFEVWGYYTSEELSHGAPYDLEVLSSCEQDVKQPQRRVVTAGYDSISRCMPDSFTGLLERIRQLELELGHLPQKWKVRWDQLELPNTVELQRAGSVCGSAARAAAACAHRRDTLEVLVRGRLAAAPPPDPAHRFLPAAAAAPARCDHCHHLLWGPLKTGVRCVDCGAACHERCAETFAPPCTKYKAPAPPDRDLRPALHDSTTHAHTLHSLYIQC

Summary

Description
Guanine nucleotide exchange factor (GEF) which activates RAB21 and possibly RAB28 (By similarity). Promotes the exchange of GDP to GTP, converting inactive GDP-bound Rab proteins into their active GTP-bound form (By similarity). In response to starvation-induced autophagy, activates RAB21 which in turn binds to and regulates SNARE protein VAMP8 endolysosomal transport required for SNARE-mediated autophagosome-lysosome fusion (By similarity). Acts as an adapter for the phosphatase MTMR2 (PubMed:16399794). Increases MTMR2 catalytic activity towards phosphatidylinositol 3,5-bisphosphate and to a lesser extent towards phosphatidylinositol 3-phosphate (PubMed:16399794).
Guanine nucleotide exchange factor (GEF) which activates RAB21 and possibly RAB28 (PubMed:20937701, PubMed:25648148). Promotes the exchange of GDP to GTP, converting inactive GDP-bound Rab proteins into their active GTP-bound form (PubMed:20937701, PubMed:25648148). In response to starvation-induced autophagy, activates RAB21 which in turn binds to and regulates SNARE protein VAMP8 endolysosomal transport required for SNARE-mediated autophagosome-lysosome fusion (PubMed:25648148). Acts as an adapter for the phosphatase MTMR2 (By similarity). Increases MTMR2 catalytic activity towards phosphatidylinositol 3,5-bisphosphate and to a lesser extent towards phosphatidylinositol 3-phosphate (By similarity).
Subunit
Homodimer (PubMed:16399794). Heterotetramer consisting of one MTMR2 dimer and one SBF2/MTMR13 dimer (PubMed:16399794). Interacts with class II PI3-kinase PIK3C2A (PubMed:22648168). Interacts (via DENN domain) with RAB21 (in GDP-bound form) in response to starvation; the interaction activates RAB21 (By similarity). Interacts with VAMP8 in response to starvation (By similarity).
Homodimer (By similarity). Heterotetramer consisting of one MTMR2 dimer and one SBF2/MTMR13 dimer (PubMed:15998640). Interacts with class II PI3-kinase PIK3C2A (By similarity). Interacts (via DENN domain) with RAB21 (in GDP-bound form) in response to starvation; the interaction activates RAB21 (PubMed:25648148). Interacts with VAMP8 in response to starvation (PubMed:25648148).
Similarity
Belongs to the protein-tyrosine phosphatase family. Non-receptor class myotubularin subfamily.
Keywords
Alternative splicing   Autophagy   Cell projection   Complete proteome   Cytoplasm   Endosome   Guanine-nucleotide releasing factor   Membrane   Phosphoprotein   Reference proteome   Charcot-Marie-Tooth disease   Neurodegeneration   Neuropathy   Polymorphism  
Feature
chain  Myotubularin-related protein 13
splice variant  In isoform 2.
sequence variant  In dbSNP:rs16907355.
EMBL
KQ459585    KPI98255.1    NEVH01020341    PNF21566.1    PNF21562.1    KK853238    + More
KDR09530.1    PNF21564.1    FX985660    BBA84398.1    KZ288189    PBC34636.1    KK107073    QOIP01000003    EZA60629.1    RLU24762.1    GL765434    EFZ16445.1    GL438820    EFN68468.1    KQ971338    EFA02135.1    ADTU01023676    ADTU01023677    GEDC01017383    JAS19915.1    KQ979608    KYN20414.1    KQ434827    KZC07590.1    GL452364    EFN77343.1    GL888243    EGI64006.1    GBYB01014117    JAG83884.1    NNAY01000561    OXU27652.1    GBYB01014118    JAG83885.1    GEZM01001405    GEZM01001400    JAV97854.1    KQ435794    KOX73887.1    KQ414713    KOC62963.1    PYGN01000670    PSN42503.1    ABLF02032798    GFXV01005658    MBW17463.1    GBHO01019369    GBHO01019368    JAG24235.1    JAG24236.1    GGMS01012985    MBY82188.1    MWRG01000458    PRD36061.1    LBMM01000932    KMQ97196.1    LRGB01001937    KZS09941.1    GDIP01121316    JAL82398.1    PNF21563.1    GAMC01019988    JAB86567.1    GAMC01019985    JAB86570.1    GDHF01027911    GDHF01019033    JAI24403.1    JAI33281.1    GEDV01006084    JAP82473.1    GFPF01010544    MAA21690.1    GFAA01003084    JAU00351.1    KQ977574    KYN01823.1    KQ982944    KYQ48956.1    KQ981965    KYN31791.1    KQ976691    KYM77978.1    GANP01008446    JAB76022.1    GGLE01000397    MBY04523.1    ACPB03011538    AHAT01023621    AHAT01023622    AHAT01023623    GAMS01004129    GAMR01002431    GAMP01008532    GAMP01008531    GAMP01008530    GAMP01008529    GAMP01008528    GAMP01008527    JAB19007.1    JAB31501.1    JAB44227.1    GEBF01002320    JAO01313.1    LWLT01000015    GAMT01009918    JAB01943.1    AC122921    AC124472    AC154911    AK029568    AK080952    AK087396    BC015069    AAH15069.1    BAC39860.1    AEMK02000009    AAEX03012895    AAEX03012896    AAEX03012897    AAEX03012898    AAEX03012899    ABGA01123855    ABGA01123856    ABGA01123857    ABGA01123858    ABGA01123859    ABGA01123860    ABGA01123861    ABGA01123862    ABGA01123863    ABGA01123864    NDHI03003449    PNJ47270.1    GABC01006579    GABF01007690    GABD01008005    NBAG03000219    JAA04759.1    JAA14455.1    JAA25095.1    PNI79334.1    JSUE03012715    JSUE03012716    JSUE03012717    JSUE03012718    JSUE03012719    JSUE03012720    JSUE03012721    JSUE03012722    JSUE03012723    JSUE03012724    JU321510    AFE65266.1    AHZZ02006966    AHZZ02006967    AHZZ02006968    AHZZ02006969    AHZZ02006970    AHZZ02006971    AHZZ02006972    AACZ04016601    AACZ04016602    AACZ04016603    AACZ04016604    AACZ04016605    GABE01001237    JAA43502.1    CABD030077490    CABD030077491    CABD030077492    CABD030077493    CABD030077494    CABD030077495    CABD030077496    CABD030077497    CABD030077498    CABD030077499    AJFE02062074    AJFE02062075    AJFE02062076    AJFE02062077    AJFE02062078    AJFE02062079    AJFE02062080    AJFE02062081    AJFE02062082    AJFE02062083    AY234241    BC011143    BC043389    BC053867    BC063656    BC101466    AB051553    BX538184    CR749312    AAKN02045461    AAKN02045462    AAKN02045463    AAKN02045464    AAKN02045465    AAKN02045466    AAKN02045467    AAKN02045468    AAKN02045469    AAKN02045470    GFDL01014046    JAV20999.1    GDIP01046785    JAM56930.1    GDIP01064828    JAM38887.1    GDIP01134167    JAL69547.1   
Pfam
PF12335   SBF2        + More
PF00130   C1_1
PF06602   Myotub-related
PF00169   PH
PF02893   GRAM
PF03456   uDENN
PF02141   DENN
PF02883   Alpha_adaptinC2
PF09066   B2-adapt-app_C
PF01602   Adaptin_N
PF01667   Ribosomal_S27e
PF03455   dDENN
Interpro
IPR004182   GRAM        + More
IPR001194   cDENN_dom       
IPR005112   dDENN_dom       
IPR002219   PE/DAG-bd       
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       
IPR037516   Tripartite_DENN       
IPR022096   SBF1/SBF2       
IPR029021   Prot-tyrosine_phosphatase-like       
IPR010569   Myotubularin-like_Pase_dom       
IPR030564   Myotubularin_fam       
IPR005113   uDENN_dom       
IPR012295   TBP_dom_sf       
IPR009028   Coatomer/calthrin_app_sub_C       
IPR016024   ARM-type_fold       
IPR013037   Clathrin_b-adaptin_app_Ig-like       
IPR002553   Clathrin/coatomer_adapt-like_N       
IPR013041   Clathrin_app_Ig-like_sf       
IPR015151   B-adaptin_app_sub_C       
IPR008152   Clathrin_a/b/g-adaptin_app_Ig       
IPR011989   ARM-like       
IPR000592   Ribosomal_S27e       
IPR011332   Ribosomal_zn-bd       
IPR020454   DAG/PE-bd       
IPR030567   MTMR13       
IPR037823   MTMR13_PH-GRAM       
IPR030574   MTMR5       
SUPFAM
SSF52799   SSF52799        + More
SSF48371   SSF48371       
SSF55711   SSF55711       
SSF49348   SSF49348       
SSF57829   SSF57829       
PDB
1ZVR     E-value=1.13771e-33,     Score=365

Ontologies

Topology

Subcellular location
Cytoplasm  
Perinuclear region   Associated with membranes (By similarity). Localizes to vacuoles in hypo-osmotic conditions (PubMed:16399794). Membrane localization is likely to be mediated via its interaction with MTMR2 (PubMed:23297362).   With evidence from 2 publications.
Membrane   Associated with membranes (By similarity). Localizes to vacuoles in hypo-osmotic conditions (PubMed:16399794). Membrane localization is likely to be mediated via its interaction with MTMR2 (PubMed:23297362).   With evidence from 2 publications.
Endosome membrane   Associated with membranes (By similarity). Localizes to vacuoles in hypo-osmotic conditions (PubMed:16399794). Membrane localization is likely to be mediated via its interaction with MTMR2 (PubMed:23297362).   With evidence from 2 publications.
Cell projection   Associated with membranes (By similarity). Localizes to vacuoles in hypo-osmotic conditions (PubMed:16399794). Membrane localization is likely to be mediated via its interaction with MTMR2 (PubMed:23297362).   With evidence from 2 publications.
Axon   Associated with membranes (By similarity). Localizes to vacuoles in hypo-osmotic conditions (PubMed:16399794). Membrane localization is likely to be mediated via its interaction with MTMR2 (PubMed:23297362).   With evidence from 2 publications.
Length:
1822
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.04756
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04064
outside
1  -  1822
 
 

Population Genetic Test Statistics

Pi
235.254183
Theta
177.52471
Tajima's D
0.844426
CLR
0.177455
CSRT
0.606569671516424
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号