SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08364  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009282
Annotation
PREDICTED:_protein_kinase_C_and_casein_kinase_substrate_in_neurons_protein_1_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.959
 

Sequence

CDS
ATGTCGCACCACAGCGACGAGCATGCGTTGCTCACAACCACTTCCGACTCGTTCTGGGAGCCTGGTAACTACAAGAGGACCACCAAGAGAGTAGACGATGGACATCGACTGTGCAGCGAACTTCAAACCCTGGTCCAAGAGCGTGCCGATATCGAGAAAGCGTACGCGAAAAGCCTCAGAGGATGGGCTAAGAAATGGAATGATTTGATCGAAAAGGGACCAGAATACGGCACAATGGAAGCTGCTTGGAAGGGTAGCATGGTGGAAGCGGAACGACTTTCAGACCTCCACCTCAGCGTCAGGGATAGGCTGGTGAACGACGTTATGGCACAGATAAAGAACTGGCAGAAGGAAACTTATCATAAGTCAATGATTCAACTAAAAGAACGCAAGGAAATGGATGAAGCATTCAAGAAGGCCCAGAAACCATGGTCGAAATTACTTCAGAAGGTTGAACGCGCCAGGCTAGAGTACCACACGGCTTGCAAACAAGAAAGAACAGCGCAGAATCAGGAAAGAAACGCCAGCGGAGACAGCTCTTTTAGTCCAGATCAAGTCAAGAAAATGGCAGATCGTGTATCGAAATGTCGCGACGAAGTGTCAAAGAACCGAGAAAAATACCAGACAGCTCTAGCCGAGATCACGGCGTACAACCCTCGATACATAGAGGACATGACTTCAGTATTCGATAGGTGCCAACAGATGGAAGCGCAGCGATTGAAATTCTTCAAAGATGTGCTGTTTAGCTTCCACAAATGCCTCAACATAAGTCAAGAACCGAGCTTACCGCAAATCTACGAAGAGTTCCACCACACGATCAACAACGCAGACAGCCAGAAGGACCTCAAGTGGTGGGCCAACAACCACGGGGTCAATATGGCGATGGCCTGGCCGCAGTTCGAGGAGTACACCGAGGAGTTCCGGGACATCGCCAAGGGCAAGTCCAAGGAGAGCCTGCCCACCGGACCGATTACGTTGCTCAATCAGCGGCCAGTCAGCGAGGATGAGTTACCGCCAATAACGAATAACAAGACGAACAAAAGTAACAATCACTCGGAGCCCCCCGCGCCCGCGCCCGCTGCCCCACCCCTCTCCAACAACACCACCGCCAACAACACCATAGACAAGAAGACTATCAGCGCCCCCATCGCCGTCACTAACGGCACGGCGGGCGGCCCGAAGTCGAACAAGTCGTCGCCCGCGCGGGAGGGCGCCGACAACCCGTTCGAGGAGGAGGAGTGGGACGGGGACGGGGAGGGGGGCGCGCTCACGGACTCCGGCGAGCCCGGCCTGCCCGTGCGCGCGCTCTACGACTACACCGGCGCAGAGAGCGACGAGCTCTCCTTCCGGCAGGGAGACCTGTTTGAGAAGTTGGAGGATGAAGACGAGCAGGGCTGGTGCAAGGGACGCAAGGACGGGCGCGTGGGGCTCTACCCGGCCAACTACGTGGAGCCCGTGGGCCACTAG
Protein
MSHHSDEHALLTTTSDSFWEPGNYKRTTKRVDDGHRLCSELQTLVQERADIEKAYAKSLRGWAKKWNDLIEKGPEYGTMEAAWKGSMVEAERLSDLHLSVRDRLVNDVMAQIKNWQKETYHKSMIQLKERKEMDEAFKKAQKPWSKLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTALAEITAYNPRYIEDMTSVFDRCQQMEAQRLKFFKDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQKDLKWWANNHGVNMAMAWPQFEEYTEEFRDIAKGKSKESLPTGPITLLNQRPVSEDELPPITNNKTNKSNNHSEPPAPAPAAPPLSNNTTANNTIDKKTISAPIAVTNGTAGGPKSNKSSPAREGADNPFEEEEWDGDGEGGALTDSGEPGLPVRALYDYTGAESDELSFRQGDLFEKLEDEDEQGWCKGRKDGRVGLYPANYVEPVGH

Summary

EMBL
RSAL01000028    RVE51835.1    GDQN01003884    JAT87170.1    GDQN01002236    JAT88818.1    + More
KK852480    KDR22965.1    NEVH01020867    PNF20809.1    PNF20810.1    GL436038    EFN72357.1    KZ288238    PBC31372.1    JR036346    JR036347    AEY57094.1    AEY57095.1    KQ979074    KYN22923.1    GL888262    EGI63711.1    KQ983001    KYQ48449.1    KQ981610    KYN39334.1    KK107168    EZA56120.1    GEDC01001172    JAS36126.1    MH366161    QBB01970.1    JR036342    JR036343    AEY57090.1    AEY57091.1    KQ976441    KYM86422.1    GL766449    EFZ15259.1    GBBI01002396    JAC16316.1    GEDC01002798    JAS34500.1    KQ976940    KYN06969.1    AAZO01000721    DS235030    EEB10746.1    NNAY01000121    OXU30773.1    GBGD01001320    JAC87569.1    GGMS01003146    MBY72349.1    GFXV01002772    MBW14577.1    GGMR01007480    MBY20099.1    ABLF02035160    KQ434847    KZC08470.1    KQ435735    KOX77176.1    QOIP01000001    RLU26885.1    GFDF01006539    JAV07545.1    KQ774368    OAD52324.1    AJWK01002090    AJWK01002091    AJWK01002092    GFDF01006538    JAV07546.1    GDAI01001717    JAI15886.1    KQ971338    EFA01905.1    GALX01002845    JAB65621.1    GEZM01083915    JAV60950.1    GBHO01035907    GBHO01035906    JAG07697.1    JAG07698.1    GFDL01000702    JAV34343.1    GFDL01000701    JAV34344.1    CM000160    EDW96186.1    GAKP01021964    GAKP01021962    JAC36990.1    KRK02972.1    KRK02973.1    GAKP01021960    JAC36992.1    JRES01000558    KNC30245.1    EZ422921    ADD19197.1    GDHF01033603    GDHF01018655    GDHF01009598    GDHF01000574    JAI18711.1    JAI33659.1    JAI42716.1    JAI51740.1    ATLV01014737    KE524984    KFB39478.1    GANO01000264    JAB59607.1    CH954181    EDV48333.1    KQ414624    KOC67557.1    CM000364    EDX12171.1    AE014297    AY069690    AAF55812.2    AAL39835.1    AGB96166.1    AGB96167.1    GGFK01001269    MBW34590.1    ADMH02001879    ETN60693.1    CVRI01000057    CRL02495.1    GGFJ01004502    MBW53643.1    JXJN01022478    GGFM01000398    MBW21149.1    GAMD01002326    JAA99264.1    CH480842    EDW49610.1    CH933806    EDW16566.2    KRG02215.1    KRG02216.1    KRG02214.1    LJIJ01000165    ODN01239.1    KRG02217.1    GAMC01007464    GAMC01007463    JAB99091.1    KA646236    AFP60865.1    CCAG010005574    LNIX01000006    OXA53001.1    PNF20811.1    GEDV01004755    JAP83802.1    UFQT01000003    SSX17158.1    AXCM01003955    GFAC01004602    JAT94586.1    CH902617    EDV42445.1   
Pfam
PF00611   FCH        + More
PF14604   SH3_9
PF00018   SH3_1
PF01217   Clat_adaptor_s
Interpro
IPR001452   SH3_domain        + More
IPR031160   F_BAR       
IPR027267   AH/BAR_dom_sf       
IPR001060   FCH_dom       
IPR036028   SH3-like_dom_sf       
IPR022775   AP_mu_sigma_su       
IPR011012   Longin-like_dom_sf       
SUPFAM
SSF103657   SSF103657        + More
SSF50044   SSF50044       
SSF64356   SSF64356       
Gene 3D
PDB
3I2W     E-value=2.62617e-115,     Score=1063

Ontologies

Topology

Length:
488
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00160
outside
1  -  488
 
 

Population Genetic Test Statistics

Pi
225.839093
Theta
172.565396
Tajima's D
0.894423
CLR
0.511877
CSRT
0.626968651567422
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27530593 KIDVIEDNDDSNDEEKT 100.00 2e-10
28556443 NASGDSSFSPDQVK 100.00 1e-05
28556443 QGDLFEK 100.00 1e-04
28556443 TISAPIAVTNGTAGGPK 100.00 1e-04
28556443 SAVYISELIDEICKK 100.00 4e-04
28556443 YQTALAEITAYNPR 100.00 0.004
28556443 YIEDMTSVFDR 100.00 0.004
28556443 YIEDMTSVFDR 100.00 0.004
26280517 NAQFNDFVSPICIPTSNEIR 100.00 0.022
26280517 GPAIGIHTIR 100.00 0.027
28556443 YQTALAEITAYNPR 100.00 0.027
28556443 LCSELQTLVQER 100.00 0.044
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