SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08362
Pre Gene Modal
BGIBMGA009226
Annotation
PREDICTED:_cilia-_and_flagella-associated_protein_97-like_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 4.7
 

Sequence

CDS
ATGTCACGCCGAGAGAGTACTATAGAAGTCAAAGATTATATCGACACAAAAAATTCATCGGGCGATTCTAAAGCTGTAAAAACTAAAATACAGGAAGAGAACAATAACGAAATAGATGAACTGTCGAAAGAATTCACGGAAATGGGATGCATAGTCGACGCCGTGAAACGACCTCCGAACGTTTGCGTTGAGACTTGTGTTTACGAATCAAAAGATGATGAGAAAACCGAAAGATATTACACGGATGACGAAGACGCTTATTCAGATGAGTTCGAAGATGATAAGAGTGAAGAGGAAGTGTCTATTGAAACAGTAGAGAGAGTGACTAAAAGCGAAACAAGCCGTGGACCCAGTCAGATATGTGTGAACTTGACAAAAAGCCAGTCTTTAATGTCCACTAATAAACCCAATTCGATTTCTGGAAGATCTACTAACTATGGCTCTATTTCAGCGCCTCAAACGCGGCGTATTAACATGTCTTTCTCTAACGAGAGACTACGAGAGATTGAGAGGCACAATCACATTTTGCTAACTAAAATACTAAGCGCTAGGAATTCGAAGAAGTCTTCAGTTCCAGCAAGAGATCCGCCGACAAGGAGGCCGGTTCCTCCTGCTGCGGTTTTAAGGAAAAACCAACAAAGAAAGATCGATCATGACAACCTGATCCTTTTGAAAAAAATTCAGCGCGCCAAATCGTCTGCCTGCAGCATCCGTCGTTGA
Protein
MSRRESTIEVKDYIDTKNSSGDSKAVKTKIQEENNNEIDELSKEFTEMGCIVDAVKRPPNVCVETCVYESKDDEKTERYYTDDEDAYSDEFEDDKSEEEVSIETVERVTKSETSRGPSQICVNLTKSQSLMSTNKPNSISGRSTNYGSISAPQTRRINMSFSNERLREIERHNHILLTKILSARNSKKSSVPARDPPTRRPVPPAAVLRKNQQRKIDHDNLILLKKIQRAKSSACSIRR

Summary

Pfam
PF13879   KIAA1430
Interpro
IPR038791   Cfap97/Hemingway        + More
IPR029488   Hmw/CFAP97D1       

Ontologies

GO

Topology

Length:
239
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.16342
outside
1  -  239
 
 

Population Genetic Test Statistics

Pi
170.127363
Theta
34.863423
Tajima's D
0.14157
CLR
0.017141
CSRT
0.410679466026699
Interpretation
Uncertain
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