SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08354
Pre Gene Modal
BGIBMGA009233
Annotation
PREDICTED:_probable_protein_phosphatase_2C_T23F11.1_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.931
 

Sequence

CDS
ATGGGGCAAACCCTTTCTGAGCCTGTGACAGAGAAGCAGTCAGCAACATGTCAAGATTCAAGGTTCTTGGTCGGATCATCATGCATGCAAGGCTGGCGAGTGTCCATGGATGACTCACACACACATATACTGTCACTACCTGATGATCCGGGCACTGCATTTTTTGCAGTCTACGATGGTCATGGAGGTTCAAACATAGCAGAACATGCTGGGAAACATTTACATAAGTATATAACAGCACGACCCGAGTACCACCTTGGTAACATTGAAGAGGCATTGAAACAGGGTTTTCTAGATCTAGATCGAGCAATGCTAGAAGAAGATATGTTGCAAGAAAAGGTTGCAGGCAGTACAGCAGTGGTGGTGCTTATCAAGGACAACACATTGTACTGCGCTAATGTAGGCGACTCCAGAGCCGTGGCTAGTGTCAGGGGTGTGGTGGAGACACTGTCATATGACCACAAGCCCAACAACGAAGAGGAGCTACGTAGGATCATAGCTGGTGGTGGTTGGGTCCAGTTGAATCGTGTGAATGGTAATCTCGCATTGTCTCGAGCCTTGGGAGACTACGTGTTCAAGAGGAATTATAGATTATCCCCTCAAGAGCAGATTGTTACTGCTTATCCCGACGTGCAAGTGCGTCATGTAAACGAAGACTGGGAGTTTATCGTCATAGCCTGTGACGGTATTTGGGAAGTTCTCACTAATGAGGAGGTGATATCTTTTTGTCGAGTTCGATTGCTGAGCGGCTGGGAGCCGGCCGCGGTCTGCGAGGCGTTAATGCAGCGATGTTTAGCGCCGAACTGCGCGACGGGCGGCCTCGGCTGCGACAACATGACCGTGGTCATTGTCTGTCTGTCGCCGTTCCCGAGGGGGGCGCCACATGATGTTCCTTTGCCCACTGAACAAGAATTAAACAGCAAATTCATGACGAAAATGGACGATTTATTGTACGCGGAAGACGAAGATGAAGATATTAAGTGA
Protein
MGQTLSEPVTEKQSATCQDSRFLVGSSCMQGWRVSMDDSHTHILSLPDDPGTAFFAVYDGHGGSNIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLDRAMLEEDMLQEKVAGSTAVVVLIKDNTLYCANVGDSRAVASVRGVVETLSYDHKPNNEEELRRIIAGGGWVQLNRVNGNLALSRALGDYVFKRNYRLSPQEQIVTAYPDVQVRHVNEDWEFIVIACDGIWEVLTNEEVISFCRVRLLSGWEPAAVCEALMQRCLAPNCATGGLGCDNMTVVIVCLSPFPRGAPHDVPLPTEQELNSKFMTKMDDLLYAEDEDEDIK

Summary

Cofactor
Mg(2+)
Similarity
Belongs to the PP2C family.
EMBL
BABH01022309    BABH01022310    NWSH01000678    PCG74851.1    RSAL01000028    RVE51847.1    + More
ODYU01000920    SOQ36409.1    PCG74850.1    KQ459585    KPI98239.1    KJ815046    AIJ00863.1    AGBW02011349    OWR46798.1    KK852614    KDR20209.1    NEVH01025635    PNF15251.1    JRES01000318    KNC32347.1    CH933809    EDW17597.1    KRG05633.1    GEBQ01011126    JAT28851.1    CH964278    EDW85426.1    GEBQ01010439    JAT29538.1    CH940669    EDW58286.1    GAMC01008439    GAMC01008438    JAB98116.1    GEZM01094048    JAV55975.1    CM002912    KMY97312.1    CH480817    EDW50309.1    CM000363    EDX09053.1    JXJN01014256    CH902618    EDV39636.1    KA647224    AFP61853.1    CCAG010020556    OUUW01000002    SPP77533.1    CH379070    EAL30175.2    CH479244    EDW37707.1    GDRN01100465    JAI58571.1    GDHF01020989    GDHF01005936    JAI31325.1    JAI46378.1    GFXV01003579    MBW15384.1    CP012525    ALC43067.1    GBXI01010996    GBXI01009481    GBXI01009455    JAD03296.1    JAD04811.1    JAD04837.1    GFDG01002209    JAV16590.1    AJWK01022410    CH916366    EDV95568.1    GAKP01010297    GAKP01010296    JAC48656.1    CM000159    EDW93243.1    AE014296    AY070552    AAF47746.1    AAL48023.1    ABLF02040615    KQ971338    EFA02473.2    GANO01002331    JAB57540.1    SAUD01004586    RXG67494.1    CH954178    EDV50751.1    GECU01008878    JAS98828.1    GFDF01007022    JAV07062.1    GECU01025197    JAS82509.1    GDRN01100467    GDRN01100466    JAI58569.1    GGMR01004780    MBY17399.1    QCYY01004298    ROT61192.1    UFQS01004158    UFQT01000773    UFQT01004158    SSX16214.1    SSX27116.1    SSX35540.1    GEDC01010663    JAS26635.1    GDAI01001784    JAI15819.1    SAUD01001441    RXG71562.1    LNIX01000002    OXA61065.1    GFJQ02004417    JAW02553.1    GFDL01013735    JAV21310.1    UYWY01020432    VDM41548.1    AXCM01000419    JH817692    EKC28873.1    JPKZ01000436    KHN87367.1    DS235083    EEB11511.1    DS233048    EDS27738.1    GEDV01007694    JAP80863.1    GFWV01018829    MAA43557.1    GFPF01011050    MAA22196.1    NEDP02005519    OWF39618.1    ALC44699.1    AAAB01008799    EAA03657.5    EGK96185.1    JH431244    ATLV01021696    KE525322    KFB46822.1    ABLF02012709    ABLF02034760    APCN01001972    EDV50056.1    KB202591    ESO89473.1    JI167801    ADY42760.1    LSMT01000359    PFX19449.1    CH477775    EAT36339.1   
Pfam
PF00481   PP2C
Interpro
IPR036457   PPM-type_dom_sf        + More
IPR015655   PP2C       
IPR001932   PPM-type_phosphatase_dom       
IPR000222   PP2C_BS       
SUPFAM
SSF81606   SSF81606       
Gene 3D
PDB
2I0O     E-value=5.90284e-62,     Score=601

Ontologies

Topology

Length:
327
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00481
Exp number, first 60 AAs:
0.00023
Total prob of N-in:
0.00959
outside
1  -  327
 
 

Population Genetic Test Statistics

Pi
191.612607
Theta
175.429759
Tajima's D
0.175494
CLR
0.32469
CSRT
0.413479326033698
Interpretation
Uncertain
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