Gene

KWMTBOMO08346

Pre Gene Modal

BGIBMGA009272

Annotation

PREDICTED:_transient_receptor_potential_protein_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr14(+):6367207-6374313      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.255

CDS

ATGAGTTGGGAATCAGTGGATTCCGACGGTGCCACCTTCACTCCGGATATCACGCCCCTGATACTGGCAGCGCACAGGAACCACTACGAGATCCTTAAGATCTTATTAGACAGAGGAGCGACGCTCCCGGTACCACACGACGTCAAATGCGGTTGCGACGAATGTGTGAAGTCCTCACAAGAGGATTCTCTGCGGCATTCTCAGGCTCGGATTAACGCATATCGCGCGCTTTCTTCGCCTTCACTCATAGCGTTATCGTCAGCTGACCCACTGCTGACGGCTTTCCAGCTGTCTTGGGAGTTGGGACGTCTGAGTCGAATGGAAACTGAGTTTAGAGTTGAATATAAGGCTTTACGTCAACAATGCCAAGAATTCGCCACCTCACTATTAGATCACACCAGAACCTCAAAGGAGTTAGAGATAATGCTCAACTACAACCCATGGGATTTGGACTGCTGGGAGCCCGGGGAAAGGCAAACACTTGGACGTCTCAAATTGGCTATCAAATACAAGCAAAAAATGTTTGTAGCACATCCTAATGTGCAGCAGTTATTGGGAGCAATCTGGTATGAAGGACTGCCGGGCTTCAAAAGGAAAAATATTTTCGGTCAATGCGTTCAGGTAGCAAAATTGGGGGTGATGTTTCCTGTTTACTGCACAATATACATGTTGGCCCCAAACTCAGAGTACGGCAGATTCATGAAAAAACCATTCGTCAAGTTTATTTGTCACAGTTCCTCTTACATGCTTTTCTTGACGTTGCTCTCACTGGCATCCCAAAGAGCGGAATATGTAGTACTAGAGTGGTCCAATGTAAGCTGGCTACAGGAATTAGTGGGATACTGGAAGGACCACGAAAGAGGATCTCTGCCTGGAGTCATTGAGTTCGCCGTCATTATCTACATAGCAAGTAAATTTGAGTTTGTTGGCATGCAATCTTTAAATCAATGTTATTTTAATAGTAAATCTTCATCTTAA

Protein

MSWESVDSDGATFTPDITPLILAAHRNHYEILKILLDRGATLPVPHDVKCGCDECVKSSQEDSLRHSQARINAYRALSSPSLIALSSADPLLTAFQLSWELGRLSRMETEFRVEYKALRQQCQEFATSLLDHTRTSKELEIMLNYNPWDLDCWEPGERQTLGRLKLAIKYKQKMFVAHPNVQQLLGAIWYEGLPGFKRKNIFGQCVQVAKLGVMFPVYCTIYMLAPNSEYGRFMKKPFVKFICHSSSYMLFLTLLSLASQRAEYVVLEWSNVSWLQELVGYWKDHERGSLPGVIEFAVIIYIASKFEFVGMQSLNQCYFNSKSSS

Similarity

Belongs to the transient receptor (TC 1.A.4) family.

Uniprot

H9JIC2   A0A2W1BK16   A0A2A4J032   A0A2A4J1C2   A0A437BN04   A0A212EM62   + More
A0A0N1PKC9   A0A194Q499   A0A1B6FQL6   A0A1J1HYQ2   M4N9S2   A0A1B0CBR7   A0A2P8Y1V1   A0A1B6DBK1   A0A1S4FAK9   Q17A16   A0A182FIQ9   A0A2J7PZ24   Q7PS36   A0A0C9QH65   A0A1S4G9C1   A0A182PV03   A0A182YK11   A0A182LT00   A0A182W588   A0A182T490   A0A182GH52   A0A182KCS2   A0A182N0R8   A0A087ZR90   A0A182HMZ4   A0A182QF93   A0A154PFZ3   A0A0B4VRY1   A0A182RQ80   A0A310SA84   A0A084VN48   A0A2H8TQN6   A0A1Q3FSE9   A0A0N0U7F9   K7J2P6   A0A1W4WU54   A0A336MBJ8   A0A195FV57   E2BPR3   A0A1C7CZ98   A0A182JIJ2   B0XHC6   A0A384THF3   A0A195EC27   A0A0P5DRS4   A0A232EFJ4   A0A3L8D5X4   F4WNP5   A0A026VYU6   A0A0P5BZ13   A0A0N8B8M1   A0A0N8BB71   A0A2H8TML4   A0A0P5FVE1   A0A0P5GZK1   A0A146KZM0   A0A0P5D2G9   A0A0P5D6N5   E9G3A4   A0A0P5MDT8   A0A0P6HSS9   A0A0P6ALR9   J9KVL3   A0A0K8UPV1   A0A151XBS4   A0A0L0CIC2   A0A1A9XVK1   A0A139WIM8   A0A1B0BW76   A0A1I8NT53   A0A1B0GFC1   A0A1B0AJS8   A0A034VMJ6   A0A0A1X868   Q94447   E9IL21   A0A1A9WYZ7   W8C266   B4M5X7   E0VB86   A0A0M4ERZ4   B4JU24   B4K6J2   A0A1I8MDK6   T1P894   A0A1I8PGE5   A0A2A3E6M6   A0A1D2MWP4   B3LYU7   B4NLF0   B4GNE7   Q29C99   A0A3B0JEU9   A0A3B0JFK3  

Pubmed

19121390    28756777    22118469    26354079    29403074    17510324    + More
12364791    25244985    26483478    25254364    24438588    20075255    20798317    20966253    28648823    30249741    21719571    24508170    26823975    21292972    26108605    18362917    19820115    25348373    25830018    9003779    21282665    24495485    17994087    20566863    25315136    27289101    15632085   

EMBL

BABH01022307    BABH01022308    KZ150121    PZC73176.1    NWSH01004304    PCG65239.1    + More
PCG65240.1    RSAL01000028    RVE51850.1    AGBW02013881    OWR42590.1    KQ459786    KPJ19923.1    KQ459585    KPI98235.1    GECZ01017264    JAS52505.1    CVRI01000020    CRK91249.1    KC329816    AGG86916.1    AJWK01005767    PYGN01001038    PSN38237.1    GEDC01014250    JAS23048.1    CH477341    EAT43090.1    NEVH01020341    PNF21594.1    AAAB01008846    EAA06236.6    GBYB01002829    JAG72596.1    AXCM01000046    JXUM01063153    JXUM01063154    KQ562234    KXJ76346.1    APCN01004943    AXCN02001396    AXCN02001397    KQ434896    KZC10761.1    KM280572    AJD25385.1    KQ765605    OAD53838.1    ATLV01014688    ATLV01014689    KE524978    KFB39392.1    GFXV01004504    MBW16309.1    GFDL01004514    JAV30531.1    KQ435699    KOX80578.1    UFQT01000867    SSX27732.1    KQ981215    KYN44525.1    GL449658    EFN82264.1    DS233135    EDS28306.1    KX249688    AOR81465.1    KQ979074    KYN22778.1    GDIP01153685    JAJ69717.1    NNAY01004990    OXU17130.1    QOIP01000012    RLU15644.1    GL888237    EGI64238.1    KK107558    EZA48978.1    GDIP01177990    JAJ45412.1    GDIQ01202091    JAK49634.1    GDIQ01194891    JAK56834.1    GFXV01003366    MBW15171.1    GDIQ01250973    JAK00752.1    GDIQ01235446    JAK16279.1    GDHC01017644    JAQ00985.1    GDIP01177989    JAJ45413.1    GDIP01165468    JAJ57934.1    GL732531    EFX85740.1    GDIQ01157105    JAK94620.1    GDIQ01015497    JAN79240.1    GDIP01027505    JAM76210.1    ABLF02038759    ABLF02038765    ABLF02038771    GDHF01023703    JAI28611.1    KQ982316    KYQ57836.1    JRES01000338    KNC32158.1    KQ971338    KYB27779.1    JXJN01021660    JXJN01021661    CCAG010009340    GAKP01015917    JAC43035.1    GBXI01007439    JAD06853.1    Z80230    CAB02410.1    GL764026    EFZ18825.1    GAMC01006674    JAB99881.1    CH940652    EDW59053.1    AAZO01000650    DS235023    EEB10642.1    CP012526    ALC48014.1    CH916374    EDV90994.1    CH933806    EDW16292.1    KA644906    AFP59535.1    KZ288375    PBC26701.1    LJIJ01000448    ODM97382.1    CH902617    EDV44063.1    CH964272    EDW84353.1    CH479186    EDW39273.1    CM000070    EAL26747.2    OUUW01000005    SPP80904.1    SPP80905.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    + More
UP000183832    UP000092461    UP000245037    UP000008820    UP000069272    UP000235965    UP000007062    UP000075885    UP000076408    UP000075883    UP000075920    UP000075901    UP000069940    UP000249989    UP000075881    UP000075884    UP000005203    UP000075840    UP000075886    UP000076502    UP000075900    UP000030765    UP000053105    UP000002358    UP000192223    UP000078541    UP000008237    UP000075882    UP000075880    UP000002320    UP000078492    UP000215335    UP000279307    UP000007755    UP000053097    UP000000305    UP000007819    UP000075809    UP000037069    UP000092443    UP000007266    UP000092460    UP000095300    UP000092444    UP000092445    UP000091820    UP000008792    UP000009046    UP000092553    UP000001070    UP000009192    UP000095301    UP000242457    UP000094527    UP000007801    UP000007798    UP000008744    UP000001819    UP000268350   

PRIDE

H9JIC2   

Pfam

PF08344   TRP_2        + More
PF00520   Ion_trans
PF12796   Ank_2
PF00023   Ank
PF00088   Trefoil
PF07898   DUF1676

Interpro

IPR002110   Ankyrin_rpt        + More
IPR013555   TRP_dom       
IPR002153   TRPC_channel       
IPR005821   Ion_trans_dom       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR017957   P_trefoil_CS       
IPR000519   P_trefoil_dom       
IPR012464   DUF1676       

SUPFAM

SSF48403   SSF48403       

Gene 3D

1.25.40.20    

CDD

cd00204  ANK
cd00111  Trefoil

ProteinModelPortal

H9JIC2   A0A2W1BK16   A0A2A4J032   A0A2A4J1C2   A0A437BN04   A0A212EM62   + More
A0A0N1PKC9   A0A194Q499   A0A1B6FQL6   A0A1J1HYQ2   M4N9S2   A0A1B0CBR7   A0A2P8Y1V1   A0A1B6DBK1   A0A1S4FAK9   Q17A16   A0A182FIQ9   A0A2J7PZ24   Q7PS36   A0A0C9QH65   A0A1S4G9C1   A0A182PV03   A0A182YK11   A0A182LT00   A0A182W588   A0A182T490   A0A182GH52   A0A182KCS2   A0A182N0R8   A0A087ZR90   A0A182HMZ4   A0A182QF93   A0A154PFZ3   A0A0B4VRY1   A0A182RQ80   A0A310SA84   A0A084VN48   A0A2H8TQN6   A0A1Q3FSE9   A0A0N0U7F9   K7J2P6   A0A1W4WU54   A0A336MBJ8   A0A195FV57   E2BPR3   A0A1C7CZ98   A0A182JIJ2   B0XHC6   A0A384THF3   A0A195EC27   A0A0P5DRS4   A0A232EFJ4   A0A3L8D5X4   F4WNP5   A0A026VYU6   A0A0P5BZ13   A0A0N8B8M1   A0A0N8BB71   A0A2H8TML4   A0A0P5FVE1   A0A0P5GZK1   A0A146KZM0   A0A0P5D2G9   A0A0P5D6N5   E9G3A4   A0A0P5MDT8   A0A0P6HSS9   A0A0P6ALR9   J9KVL3   A0A0K8UPV1   A0A151XBS4   A0A0L0CIC2   A0A1A9XVK1   A0A139WIM8   A0A1B0BW76   A0A1I8NT53   A0A1B0GFC1   A0A1B0AJS8   A0A034VMJ6   A0A0A1X868   Q94447   E9IL21   A0A1A9WYZ7   W8C266   B4M5X7   E0VB86   A0A0M4ERZ4   B4JU24   B4K6J2   A0A1I8MDK6   T1P894   A0A1I8PGE5   A0A2A3E6M6   A0A1D2MWP4   B3LYU7   B4NLF0   B4GNE7   Q29C99   A0A3B0JEU9   A0A3B0JFK3  

PDB

6G1K     E-value=7.58025e-71,     Score=678

KEGG

101740441    K04967 transient receptor potential cation channel subfamily C member 4 | (RefSeq) transient recepto

GO

GO:0016021   GO:0005262   GO:0016020   GO:0070588   GO:0015279   GO:0051480   GO:0070679   GO:0005887   GO:0034703   GO:0006828   GO:0006811   GO:0007605   GO:0042803   GO:0046982   GO:0008355   GO:0010461   GO:0016027   GO:0008104   GO:0071454   GO:0050908   GO:0035997   GO:0007005   GO:0001895   GO:0008377   GO:0005515   GO:0006511   GO:0019773   GO:0004298   GO:0005839   GO:0051603   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR10117  

Length:

325

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

27.18055

Exp number, first 60 AAs:

0.04308

Total prob of N-in:

0.20125

outside

1  -  325

 

 

Pi

236.218684

Theta

158.66412

Tajima's D

1.248769

CLR

0.27169

CSRT

0.729663516824159

Interpretation

Uncertain