Silkworm Genome Informatics Database

Gene

KWMTBOMO08342

Pre Gene Modal

BGIBMGA009270

Annotation

PREDICTED:_ras_association_domain-containing_protein_10_isoform_X2_[Papilio_polytes]

Location

Bomo_Chr14(+):6258827-6262067 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.02

CDS

ATGGAAGCTTCGTCATCAGACTACAGTGATGAAGAAGTGGGGGTGATAGCCCAAGGTCAAAAACTCTGGGTGAGGGGAGTCAGGCAGCATACAACCTGCGCTGATATTGTCCGAGCACTACAAGATGCCCCTGAAGCGGGTGGTATGAGTGACCAGGGTGAATGGGTGCTAGCAGAGCGGTGGCGAGGGGTAGAGCGACCTTTGCCCCCTGACGCACCCGTTCTGCACATTTTGGCGGCTTGGGGAGATGCTAGGCATGAGGTTCGGTTGTCGTTGCGTCGTTTATCAAGCGGAGGAGAAGATGACTCGGGAAGGGATAGCGATGGCGGGAGTAAGGGATCCAGAAGACGTCGACGGAGAGAACCCAGAACAGCCACTCCTCCTCCAAGAGCCAAAAGCGAAGACCCTGCCGCCAGACTCGTGTCTATTATACAATATCAGAGCAGAACCATACATCAACAACTCGACAAGTTAAGAGAGCAAGAAAAACTGATAGACCACCTTGAAGATCAAACTCACAAGAGTCGAATGGAGAAACACGGAACTAACTACCTTCTGGAATCTTATCTTCGCGACATTGGAAGGTGTAGTGAAGTTAATGACAGTCAAGCGGGCAACAGCGACAGCGGCGTCGGTGTCGGCAGTGGCACGCCGCCGAGACGACATACGAAACACAAATCCCGAAGAGAAAGACACCTCATGAGAGAGCACTATTTCACTAAAGAGTTAACAAACATCTGCCAAGTCAATTCTGAAAGACTAATGCAGACACATACCGACACAGATTCCGATGCATCGGCAGACGACTTGACCAAGATAAGAGAAGAAATAGAGCTACTAGAGAAACTAGCAATCATAAACAAGAGATTGCACCGCGAGGAAGAACTAGTGGTGAGACTCACGGCAAAAGTCAAAAGATACACTGAAGAAAACAAAGCGAATAGCTGCGAGAGTGTAGCGCAAGTGATGATGCTTCTCGATAAAATAGACAACGAATTAGGAACAACAGCAAAGGAGATGAAGGATAACGCTTTAGAATTAGAAAAGACAGAGAAGGAATTAGAATGTCGGGTGAAACTTTTAGATGAACTCACTTTAGAACTGGACGAAGAGGAATTGCAGAATGCTGTTTTGGAAAGACAATTGAACGAAGCTTCCAGCCGACAGCCAATCCTCCTTCAAGATAGTTACGTACCGGTTTTAGAGCAGCCAAATTTCGGATATGTTCTGGACACTCTTGTATGA

Protein

MEASSSDYSDEEVGVIAQGQKLWVRGVRQHTTCADIVRALQDAPEAGGMSDQGEWVLAERWRGVERPLPPDAPVLHILAAWGDARHEVRLSLRRLSSGGEDDSGRDSDGGSKGSRRRRRREPRTATPPPRAKSEDPAARLVSIIQYQSRTIHQQLDKLREQEKLIDHLEDQTHKSRMEKHGTNYLLESYLRDIGRCSEVNDSQAGNSDSGVGVGSGTPPRRHTKHKSRRERHLMREHYFTKELTNICQVNSERLMQTHTDTDSDASADDLTKIREEIELLEKLAIINKRLHREEELVVRLTAKVKRYTEENKANSCESVAQVMMLLDKIDNELGTTAKEMKDNALELEKTEKELECRVKLLDELTLELDEEELQNAVLERQLNEASSRQPILLQDSYVPVLEQPNFGYVLDTLV

Uniprot

A0A437B0I0 A0A2A4J3V1 A0A2H1WD05 A0A2W1BD63 A0A212F9A3 A0A194PY13 + More
A0A194R7L2 A0A0L7L8X0 A0A1Y1LMJ4 A0A1B0CM66

Pubmed

28756777 22118469 26354079 26227816 28004739

EMBL

RSAL01000226 RVE43956.1 NWSH01003173 PCG66827.1 ODYU01007714 SOQ50742.1 + More
KZ150121 PZC73172.1 AGBW02009619 OWR50311.1 KQ459585 KPI98231.1 KQ460627 KPJ13504.1 JTDY01002246 KOB71810.1 GEZM01056156 JAV72816.1 AJWK01018264 AJWK01018265 AJWK01018266

Proteomes

UP000283053 UP000218220 UP000007151 UP000053268 UP000053240 UP000037510 + More
UP000092461

Pfam

PF00788 RA

Interpro

IPR029071   Ubiquitin-like_domsf        + More
IPR033593   N-RASSF
IPR000159   RA_dom

SUPFAM

SSF54236 SSF54236

ProteinModelPortal

A0A437B0I0 A0A2A4J3V1 A0A2H1WD05 A0A2W1BD63 A0A212F9A3 A0A194PY13 + More
A0A194R7L2 A0A0L7L8X0 A0A1Y1LMJ4 A0A1B0CM66

PDB

2CS4 E-value=0.000569846, Score=102

KEGG

101740122 no KO assigned | (RefSeq) ras association domain-containing protein 10-like

GO

GO:0007165

PANTHER

PTHR15286

Length:

414

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00647

outside

1 - 414

Pi

240.583006

Theta

176.4911

Tajima's D

1.026652

CLR

0.347297

CSRT

0.663416829158542

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics