SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08338  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009236
Annotation
PREDICTED:_protein_FAM114A2_isoform_X2_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 2.891
 

Sequence

CDS
ATGGCTACAAGTGATAGTGAAGATTTTGAAAGTGCCGACGAGGGACAAAATACACCGATAAAAAAGGATAGAAAAGAGCGATTATCGTCCTCTAATTATACCGAAAATAGTCGGGAATTGGACCACAAAACAAAAAAAACACAATCTTCATCTACCGACACTGTGAAAAACAAAGAGGAACCTAAATCTTCTGACGGTTGGGATGATTTTGATATTGGTGATGATGAAATATTGGTAGCACAAAACGCAGTACCCTCTAACACTCATGTACTGCAGTCCAATAAAAATGAAACAATAGACTCGAATTACTCACAAGACAAGACAACAAAGAAATCTGAAGAAACAAAGAGTAAAGATACCGGTTGGGATGATTTTGATGATTGGGGACAAGATGATAATACGATTGAGGATCCCTACAAACCAATTCAGACTCAGCCAACACGACAGGAAACAAAATCAATATATCCTGATATTCAAGAGGTTACAGAAAAGCTAGCCAACACCACGACAACCAGCACTACCGGGGGCTGGGGTTGGGGATGGAGTGTAGACTCCATATTGACTACGGCAACTGCTGGTATCAGTACACTTACCAATCAAGTGTCTCAGGGCATCTCGACGGTTTTAGAAACCAGTATCGGTGCGCCAGACCCTGAAGAGTTAGCAAGACAAACTGCCAAAGAAAAAGAAGCAAAGGCAAATAGTCCTGATGGTTTAGAAAGTAATATAAATACAAATAATGACAAAGTCGATCCAAAAAGCACGAGTGATGCTTTTCCATTTAGAGGTCTTATCTCAGAAGTGACTAAATTTGTTGAAACTACTGGCACTAAAGTCATATCGGGTGGCCTAGGCACTCTGGAGACGATTGGTAAGAAAACAATGGAAGTTCTTCAAGATGGAGATCCTGGGTTGGCAAAGAAACGAGCACTACTCGGCTTAGCTCCTGACGAGAAACCGGTGCTGTCACAAATACTGAGAGAAGCGAAAGCTAAAGCTGACGAAGATGACAGAATAAGAGAAGAAAAGAAGGAAGCTAAAGAAGTACACTATGAGAATTTGTTTGACGATTTTGAAGGTCTAGTTCACTTGGAAGCCTTAGAGATGCTATCCCGGCAAGTGAACATGAGAATAGAAGAACGGATGCGGGGGCTCTCGCCTGAAAAACGACAGGATCTTAAGGAAACTTTGCAGCAGGTTGCTGAGTTATGTGAGATGCCCGAAGACGACGAAGACGATAACGACCCATCAGAAGACACGTTCAAGTCTGAGGCTTTCCACGAGAGACTTCAGACCGCGACTCAAGATCTCGGGCTGAAGTTACAATTTCAGCCCATCGTCAAACAGTACACAGAAGCGATAGACTGGTTGTCGTCGGGCGGCGAGCTCACAGAGAAGCAAGTGTACAAGCGCGCGGTCGCGAGCCTGGCGCAGGCGACGGCGCTGTCGGTGGAACTGTACCACAAGGCCGGCGAGATGCTGCTGGTGAAGCCGCGTCGCTCCACGGCAGACGAAGCTGACGCCCTCACTCAAATGACCGCGGTACTGACCAAACACGTCAGTGAGCTGGCGACTCTCTTCACCGAGAAATTGAATGAATTGCAAACAGAGAATACGGAGCAAATACATAATTACATCACGAATATATTTTTAGAGGCCGGCAACAGTTCGACTTACATCCAAAACGCATTCCAATTAGCACTGCCGATATTACAAATAGGTGCCGTGTAA
Protein
MATSDSEDFESADEGQNTPIKKDRKERLSSSNYTENSRELDHKTKKTQSSSTDTVKNKEEPKSSDGWDDFDIGDDEILVAQNAVPSNTHVLQSNKNETIDSNYSQDKTTKKSEETKSKDTGWDDFDDWGQDDNTIEDPYKPIQTQPTRQETKSIYPDIQEVTEKLANTTTTSTTGGWGWGWSVDSILTTATAGISTLTNQVSQGISTVLETSIGAPDPEELARQTAKEKEAKANSPDGLESNINTNNDKVDPKSTSDAFPFRGLISEVTKFVETTGTKVISGGLGTLETIGKKTMEVLQDGDPGLAKKRALLGLAPDEKPVLSQILREAKAKADEDDRIREEKKEAKEVHYENLFDDFEGLVHLEALEMLSRQVNMRIEERMRGLSPEKRQDLKETLQQVAELCEMPEDDEDDNDPSEDTFKSEAFHERLQTATQDLGLKLQFQPIVKQYTEAIDWLSSGGELTEKQVYKRAVASLAQATALSVELYHKAGEMLLVKPRRSTADEADALTQMTAVLTKHVSELATLFTEKLNELQTENTEQIHNYITNIFLEAGNSSTYIQNAFQLALPILQIGAV

Summary

Pfam
PF05334   DUF719
Interpro
IPR007998   DUF719       

Ontologies

GO

Topology

Length:
576
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00927999999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00087
outside
1  -  576
 
 

Population Genetic Test Statistics

Pi
317.257028
Theta
205.529729
Tajima's D
1.951204
CLR
0.345561
CSRT
0.875056247187641
Interpretation
Uncertain
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