Silkworm Genome Informatics Database

Gene

KWMTBOMO08334

Pre Gene Modal

BGIBMGA009237

Annotation

PREDICTED:_cyclin-dependent_kinase_inhibitor_1-like_[Amyelois_transitella]

Location

Bomo_Chr14(-):5805940-5845342 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.78 Nuclear Reliability : 2.162

CDS

ATGAACCCCGTCTTCAAATCAAAGATTTTCCGTGTAATAATAATTAAATACCTTAAGGTGAAGACAACGTCGTGGATGTTAATCGGTGTTGTGTTTCGCTGTTTGGACTCTATTGAGATGTCTGCTTTGAGTGTGAGGGCGCCCGGCCTACAGGCCACGACGACTGTGCTGGACACTAGGTCGCTTCGAGTTCGCGGAGTTACCGCTCTCGATGGTGTCAGAAGGAATTTATTCGGCTGTACCGATAGAGAAGAGAATAGAAGATTCGTTGAGAGAGAATTGGCGAGACAATTGGAATTGGACAGTCAAAGATGGGGCTTCGATTTTGCAAATGAACAACCTTTACCGGGCATTCAGAGATTCGCGTGGCAATTAGTACCAGCGTCTGCAGTTCCGGTAGCGTTAAGAAGGTCACCGATCACAACCTCGATGCCGAAACAGAATACATCCACCCAGGAGGCTAAAGTTTCAAGTCCAGAGAGCACCAAGACCCAAAAGAGAATAACAGATTTCTTGAAGCCCCGGAAAAGGCTATCGGGGAACGGGAAGAAGTCCCCCGCGCACAGCCACAAGCACGAGTGTGGTCATGGGGCTCACATTCGTCCTCCCAAAGTGGCTCGTCTATCGCAGCCGCATTTCAAACGCACGAGCTAG

Protein

MNPVFKSKIFRVIIIKYLKVKTTSWMLIGVVFRCLDSIEMSALSVRAPGLQATTTVLDTRSLRVRGVTALDGVRRNLFGCTDREENRRFVERELARQLELDSQRWGFDFANEQPLPGIQRFAWQLVPASAVPVALRRSPITTSMPKQNTSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKSPAHSHKHECGHGAHIRPPKVARLSQPHFKRTS

Uniprot

A0A1E1VYD7 A0A1E1W639 A0A212FGH7 A0A2W1BWF8 A0A2R4RM85 A0A3S2TCL8 + More
A0A067RG00 A0A1Q3FFF5 A0A1Q3FFD1 W5N462 A0A1L8DLQ9 A0A3B5KHJ7 A0A3B5K771 A0A3Q1AWH8 A0A3B1K144

Pubmed

22118469 28756777 24845553 21551351 25329095

EMBL

GDQN01011355 JAT79699.1 GDQN01008723 JAT82331.1 AGBW02008666 OWR52842.1 + More
KZ149916 PZC77954.1 MF062246 AVZ23639.1 RSAL01000371 RVE42136.1 KK852485 KDR22806.1 GFDL01008758 JAV26287.1 GFDL01008794 JAV26251.1 AHAT01016599 GFDF01006779 JAV07305.1

Proteomes

UP000007151 UP000283053 UP000027135 UP000018468 UP000005226 UP000257160 + More
UP000018467

Pfam

PF02234 CDI

Interpro

IPR003175   CDI        + More
IPR029842   CDKN1C
IPR029841   CDKN1A

ProteinModelPortal

A0A1E1VYD7 A0A1E1W639 A0A212FGH7 A0A2W1BWF8 A0A2R4RM85 A0A3S2TCL8 + More
A0A067RG00 A0A1Q3FFF5 A0A1Q3FFD1 W5N462 A0A1L8DLQ9 A0A3B5KHJ7 A0A3B5K771 A0A3Q1AWH8 A0A3B1K144

PDB

1JSU E-value=2.40458e-05, Score=111

KEGG

101739436 no KO assigned | (RefSeq) uncharacterized LOC101739436

GO

GO:0007050 GO:0007346 GO:0005634 GO:0072331 GO:0004861 GO:0016301 GO:0010165 GO:0035914 GO:0035904 GO:0006508 GO:0005198 GO:0005576 GO:0030145 GO:0006412 GO:0016876 GO:0043039

PANTHER

PTHR10265:SF44 PTHR46778:SF1

Length:

217

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.90899

Exp number, first 60 AAs:

1.90117

Total prob of N-in:

0.12314

outside

1 - 217

Pi

268.862016

Theta

197.671079

Tajima's D

1.145132

CLR

0.048708

CSRT

0.697365131743413

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics