SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08329
Pre Gene Modal
BGIBMGA009238
Annotation
PREDICTED:_uncharacterized_protein_LOC101746690_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.922
 

Sequence

CDS
ATGAACATTATTGTGTTAACGATATATTTTATTTATGTTTACGATGTAATGGCTAATGATTACGACGACGATGAGAAATTATTCATGATGGTATCGCCAGATCAACATCACCGCACACCTCGACTGGAGGATTTCTTCTGGACGGGTTCTGGTGATGGACCCCCGGCGCCTGAAGCTGAAGTGTCAGTGCCCTCAAAGCCATCCACTCCACTTGTACGCACAACTACTGTGCTCGCAACGGTTTATTTGGACTCCTATCCACCACAGGCGGTGACAGACAAAACAACTGGAGATTGCGTCATGAATTGTGGAGAACCAGTCATACCGGACAGTTTGGAACCAGAGATTCCAGAAGACCGAAGATATTGGCTTTTAACTGTTATTCAGGGTTCAACACCAGATAGTCTTCACATGAGACTAGCGCGATTGTATCAGAAGGCATTCTTGAGACAACAAGAAAGACATCTAGGTATAATTAAATCTTTAGATGCACCGACAGCACGGAAGAAACACGACGTTCATTCCTTTATTGTTCACAAAGAAAATAACAAGGTCTCTGAAAACGAAACACCTTTCAAATATTTTGGAGTCAACAGCACAGTTTCTTCGGTTAAGTCCATGTCCGTAGTTTCTACAACAAAAATAGTTGATCAAAATTCTAGCTCTTTAACTCCAAAATTTTATGAAGCCATCGAAATGTACCCACTCAACAATATAGATACTGTTATTCGTATTGAACCCACAAAAATAGATGAAGCAGATTGGATTTTGGCCACACCAACAATCACTCTCAATAAGAGAGAAATCTCAGATCATAATGAACTGGAAGTAATTAAAGAGGACTTAATAGATATACCTCTAGAGAGCGAAGCAAATGAGACGATTTTGTTTAAGAGAGAAATCATACATCCAGATCAACAGCCACCGGTGCGAGTTCACATACAAAACATAACTGAGTCTCCAGACTCTGGAACGATACAAATCGTGTATGTTGTGCTGGTCGGAGGTCGGGCGGTACCCGCAGCCGTAGCGGCCAGGGATATGAGACTGGTGAGAGACGCCGAAGTGGCGCGGGAGCTTGGCGCAGTTGTCACCACGAAAGCTGAGCCAGCATATCTGAAGGCGGCTGAAGGTTTAGAGGGAGAGGCAGACGCAGGCGGAGTCCGTGGCTCTGAGCTCTGGGCCTTGGCAGTAGGTTCTACTATAGCACTGCTATTGGTTCTCATATTGCTGGCGCTACTGTGTTTTGCGCACAGGAAAAAGCAAATCAAGTCTGCAGCCTCACTCCGGGCCTATCGGGATGAGTTAATGAGAGAGGCAGAGAGGAAGCAGCTCAAGCAAGTGCACGAAGAGAGGGACGGGAAGCTTATAAGCGTAGTGTCCCCGAGCAGAACCAGACCTAGTAGCAGTCTTCTGCCGATCTATAGAGCCGCCAGTGCATCCAGTTCGTCAACGACATCATCGGGGGTGTCGGAAGTGGCCGCGGCACTTCGGAGGCGGCAGAAGAAGCCACATGCTCTGAGGATGCCGCAGAAGAGACGAGTGGGCACAACAGACAGTCTGCTGGAGGCTGCGGGCGTGGAGAGCTCCGACAGTGGACAGCCGTCAGCTCCTCGAACCCCCACTTCGTATCTGTCCATGCCCTCTGTCAGCTCCTTCCCCAGAGGGAATATAGTAGAGCCTCTCTCTAAAATCTTGGAGCCTGTATCAGTCCGGCATCTAGACATAGATTCTCCCATCTCCACTCCAAAAAAGAGAGAACCGAGCAACCAAGAGGTGGTGCCCAGAAGACAGATGCCTTCACAGCTGGTCAGGCTCGGAAGCATTGACAAAGACCCTGGCGTCATAGGACCTCTGGTCTGGGACTTACATTGCCAGAGAATAAAAGATGTTTCAAAGCCGTCATCTCCAACGAGACCTTCGCCTCGGAGAGAAGCAGGAGCTTCCAAAATGCGGCAGCGCTTCAACGAGCTCATGGACGACGCCTTCACGTTGTTCGGCAGCGCGGCCCCCAGCCCCGCCCCCCGGGACTCCGCCTCCTTCGACACGGAAACTGACCACAAGAGATCCGTTGGCTCGGGAGTGACCCAAGCGCGCAACGACAACGTCCGGCTCCCGGGCTCCGACACCGGCCGGGGGCACTCCGCGGGGACCGGGAGGGTCAGCGGGAGTGTTTTGTCGATGGAATGCCTACGCCCTAGAACTACGGCGGCGAGGCCGCAACAGCGTAGGGCTCCGCCCCCGGCCTCTGCTTGGGGACCAACAACATCTATAGGAGCGTCGGTCCCTGTGGTGAACCCTGGTTTGGTGGCGACGGACGGCCGCCTGCCCCCGGAGGACCCCGCGGTGCCGCTCATATCGGCCATCAAGACGGAGATACAGCGCATCAGAGACAACGCCACCAAACTTTAA
Protein
MNIIVLTIYFIYVYDVMANDYDDDEKLFMMVSPDQHHRTPRLEDFFWTGSGDGPPAPEAEVSVPSKPSTPLVRTTTVLATVYLDSYPPQAVTDKTTGDCVMNCGEPVIPDSLEPEIPEDRRYWLLTVIQGSTPDSLHMRLARLYQKAFLRQQERHLGIIKSLDAPTARKKHDVHSFIVHKENNKVSENETPFKYFGVNSTVSSVKSMSVVSTTKIVDQNSSSLTPKFYEAIEMYPLNNIDTVIRIEPTKIDEADWILATPTITLNKREISDHNELEVIKEDLIDIPLESEANETILFKREIIHPDQQPPVRVHIQNITESPDSGTIQIVYVVLVGGRAVPAAVAARDMRLVRDAEVARELGAVVTTKAEPAYLKAAEGLEGEADAGGVRGSELWALAVGSTIALLLVLILLALLCFAHRKKQIKSAASLRAYRDELMREAERKQLKQVHEERDGKLISVVSPSRTRPSSSLLPIYRAASASSSSTTSSGVSEVAAALRRRQKKPHALRMPQKRRVGTTDSLLEAAGVESSDSGQPSAPRTPTSYLSMPSVSSFPRGNIVEPLSKILEPVSVRHLDIDSPISTPKKREPSNQEVVPRRQMPSQLVRLGSIDKDPGVIGPLVWDLHCQRIKDVSKPSSPTRPSPRREAGASKMRQRFNELMDDAFTLFGSAAPSPAPRDSASFDTETDHKRSVGSGVTQARNDNVRLPGSDTGRGHSAGTGRVSGSVLSMECLRPRTTAARPQQRRAPPPASAWGPTTSIGASVPVVNPGLVATDGRLPPEDPAVPLISAIKTEIQRIRDNATKL

Summary

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.690278
 
 
Length:
803
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
24.34048
Exp number, first 60 AAs:
0.46437
Total prob of N-in:
0.04000
outside
1  -  393
TMhelix
394  -  416
inside
417  -  803
 
 

Population Genetic Test Statistics

Pi
226.830607
Theta
186.684796
Tajima's D
0.835983
CLR
0.179041
CSRT
0.616769161541923
Interpretation
Uncertain
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