SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08327
Pre Gene Modal
BGIBMGA009239
Annotation
PREDICTED:_uncharacterized_protein_LOC101738833_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.571
 

Sequence

CDS
ATGTCAGCAAAGTCAACAACACCGCGCAAACGAAATCAAAGGATAACTACAAGATTATCACAGGAGAACATCAACAAATGTAACAAATCAGTAGAAAGACAGCGAGCTAGGACTTTTGTAACATGGTACAAGCAAATGATAGACAACGAAAGACAAAACCTAGCTCTATACCTAGCTGATGATGCATTTCTGGAATGGTTTGGGCGCACAATAAAAACAAGAAAGAAAGTGAGTGCCTTCTTGAAACATGATATGCATTGTTCAAAGCACGACTTTACATCTGTTGAAAGTATAGAAAAAATACAAAATAGACATGAAAAATTACACAGGAGAGACGATGGAACTTTAGTGAGTCCTCTACATTCCCCAGAGATAAAAACAGGAAAGCCAGGCAAAAAAAAGCTAAGTTTCAACTGCAGCCCTGAGTGGGCTGAAGGATGTCAGCCATTAGATGAAATTAAAATTGATAAGAAAAAAGTAAAAATAGAAAATAATGTGTATGAAATTGTTGAACAAGAACAAAATTCTTTGAAGAGACAATATCCAGAAGATGAAAATAACATTGATATAAGTCAGAATGGTGATGGAATGGGACAGAAGCCAAAAAGAAAATGTATTCCAGTAACACCACCAAATCCAGAACTAGGTCAAGGTGATTGTCTTCCATCCACAAGTGGAACTGATTCAGACAAATCTCATGACACATTGAATGCCCAGTTGCAGAAATTAGCAGTTGAATGTAATGGGTATATAGAATTTACTAGAACTAGAAATAGCCGAAGTAATGAGGGCATGAAATGGGACAGAAAGTGTAAAGTCCAAATAAGTTATTCAGAAGATCCATTAAATATTGGAGAATATATAATTTGGGCATTGAGATATACAGATGAAAGTAAATGCCGTAGGAACCTCCTTCCTGATTTTGAAGAAGTAGCAAGAGAAGAAATACGTACATAA
Protein
MSAKSTTPRKRNQRITTRLSQENINKCNKSVERQRARTFVTWYKQMIDNERQNLALYLADDAFLEWFGRTIKTRKKVSAFLKHDMHCSKHDFTSVESIEKIQNRHEKLHRRDDGTLVSPLHSPEIKTGKPGKKKLSFNCSPEWAEGCQPLDEIKIDKKKVKIENNVYEIVEQEQNSLKRQYPEDENNIDISQNGDGMGQKPKRKCIPVTPPNPELGQGDCLPSTSGTDSDKSHDTLNAQLQKLAVECNGYIEFTRTRNSRSNEGMKWDRKCKVQISYSEDPLNIGEYIIWALRYTDESKCRRNLLPDFEEVAREEIRT

Summary

Pfam
PF02136   NTF2
Interpro
IPR032710   NTF2-like_dom_sf        + More
IPR002075   NTF2       
SUPFAM
SSF54427   SSF54427       

Ontologies

GO

Topology

Length:
318
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01555
Exp number, first 60 AAs:
0.00619
Total prob of N-in:
0.10150
outside
1  -  318
 
 

Population Genetic Test Statistics

Pi
192.080057
Theta
172.105181
Tajima's D
0.581813
CLR
0.021063
CSRT
0.541072946352682
Interpretation
Uncertain
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