Gene

KWMTBOMO08325  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009240

Annotation

PREDICTED:_N-alpha-acetyltransferase_15?_NatA_auxiliary_subunit_[Papilio_xuthus]

Location

Bomo_Chr14(-):5622166-5630994      View in EpiBrowser

Full name

Glycerol-3-phosphate dehydrogenase [NAD(+)]      

Location in the cell

Cytoplasmic   Reliability : 1.761 Mitochondrial   Reliability : 1.203 Nuclear   Reliability : 1.495

CDS

ATGCCTCCAAGCAATCCTTTACCACCTAAAGAGAATGCTCTTTTTAAAAGAATTTTGCGGTGCTACGAACATAAACAATACAAAAATGGGTTAAAATTCGCCAAACAGATATTATCCAACCCAAAGTTCGCGGAGCATGGAGAAACCTTAGCCATGAAAGGTCTAACATTAAATTGCTTAGGTCGCAAGGATGAGGCATATGACTATGTACGCAGAGGTCTACGTAATGATCTGAAGTCCCCAGTATGTTGGCATGTGTATGGGCTGTTGCAGCGCTCTGACAAGAAATACGATGAGGCAATAAAATGTTACCGTAATGCACTAAAATGGGAAAAGGAGAATATTCAAATTCTCAGAGATTTGTCACTATTACAAATTCAGATGAGAGATTTAGAGGGTTATAAAGATACCAGATATCAGCTTTTCATGCTGAGGCCTACACAAAGAGCATCATGGATAGGATTTGCTATGAGCTACCATCTCCTCGGTGATTATGAAATGGCAAACAGTATCCTAGATGCATTCCGCACTCATCAGATGAAAGGTCCATATGATTATGAACACTCAGAATTGCTATTATACCAGAATATGGTACTGGCCGAATCAGGACAATATGAGAGAGCCTTGCAGCATTTACAGAAGTTTGAAAGTCAAATTCTGGATAAATTATCTGTGAAAGAAACTTCTGGGGAATATTACTTAAAATTGAACAGATTCAAGGAAGCAGAAGGAATTTACGAAGACTTGTTAAAGAGAAATCCCGAAAATGTTTTGTACTACAGTAAGTTAATAGAAGCGAAACAACTCATTAAAGCTGAAGACAAAGTGGCCTTTTTTGATGAATACAAGAAGCAGTATCCAAAGGCAATAGCACCGCGACGTCTGCAATTGACCGAGGCACAGGCGCAGTCCTCATTTGAAAACCTCGTTGACGAGTACCTCAGACATGGACTGTACAAAGGAATTCCTCCACTTTTTGTAGATTTGAGATCTTTATACGCAGATCCAATGAAAGCGGAAACGATAGAGAAATTAATAATACAGTACATAGATAATTTAGCTAAAGATTGTACATTTGGACCAGACCCGAGTGAAGTGAAGCAGCCCGCAAGTGCGCTTTTGTGGGCGTACTATTTCGCGGCCCAACACTTCGATCACAAGAAGGATACGGATCGAGCGTTGCATTACATAGACGCCGCCATTGAACACACCCCTACATTGATAGAATTGTTTATTGTTAAGGGAAGAATATACAAGCATGCCGGCGACCCAATATCCGCGTACCAGTGCTTAGAGGAAGCTCAAGCGATGGACACGGCGGATCGATACGTCAACTGTAAATGCGCGCGGTACATGCTCAGGGCGGGCCACATCAAACGAGCCGAGGAGATGTGCGCCAAGTTCACGAGGGAAGGTGTACCGGCAACGGAAAACTTAAATGAAATGCAATGTATGTGGTTCCAAACGGAAGCTGCTGCTTCATACCAAAGACTTCAACAATGGGGAGAGGCTCTGAAAAAAGCACACGAAGTCGACAGACACTTCTCGGAGATAATGGAGGACCAGTTCGACTTCCACTCGTACTGCATGCGCAAGATGACGCTCCGCTCGTACGTGGGGCTGCTGCGGCTGGAGGACGTGCTGCGCGCGCACCCCTTCTACTTCCGCTGCGCGCGCGTCGCCGTGCGCGTGTACCTGCGCCTGCACGCGCGCCCGCGCTCCGACGCGCCGCAGACCGCCGAGCCCGACACAGGTATGTCGCCATCGTACATACATCATTACTAG

Protein

MPPSNPLPPKENALFKRILRCYEHKQYKNGLKFAKQILSNPKFAEHGETLAMKGLTLNCLGRKDEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRDLEGYKDTRYQLFMLRPTQRASWIGFAMSYHLLGDYEMANSILDAFRTHQMKGPYDYEHSELLLYQNMVLAESGQYERALQHLQKFESQILDKLSVKETSGEYYLKLNRFKEAEGIYEDLLKRNPENVLYYSKLIEAKQLIKAEDKVAFFDEYKKQYPKAIAPRRLQLTEAQAQSSFENLVDEYLRHGLYKGIPPLFVDLRSLYADPMKAETIEKLIIQYIDNLAKDCTFGPDPSEVKQPASALLWAYYFAAQHFDHKKDTDRALHYIDAAIEHTPTLIELFIVKGRIYKHAGDPISAYQCLEEAQAMDTADRYVNCKCARYMLRAGHIKRAEEMCAKFTREGVPATENLNEMQCMWFQTEAAASYQRLQQWGEALKKAHEVDRHFSEIMEDQFDFHSYCMRKMTLRSYVGLLRLEDVLRAHPFYFRCARVAVRVYLRLHARPRSDAPQTAEPDTGMSPSYIHHY

Catalytic Activity

NAD(+) + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H(+) + NADH

Similarity

Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.

Uniprot

H9JI90   A0A2W1BSB1   A0A2H1VJ79   A0A194PXZ9   A0A212FDY8   A0A067R5Y7   + More
A0A1B6HMF7   A0A1W4XAU5   A0A2A3EQW5   A0A1W4XBZ6   A0A087ZRP6   D2A0B9   A0A0C9R5T2   A0A232F5T2   K7J6S9   A0A0N0BI27   A0A195CGQ8   A0A195BGR2   A0A158N9D6   A0A151XIC8   A0A336KKR7   A0A2H1VJ75   A0A1B6C9Q1   A0A336M640   E2ANZ3   A0A1Y1N7A8   A0A0J7L4Z6   A0A3Q0ISG2   F4WJY7   A0A146KLI1   E9IP68   A0A0A9ZBP9   A0A1Y1N751   A0A146LKY9   A0A0K8SFC9   E2BPZ9   A0A3L8DR34   A0A0T6B9Q7   E0VDK3   A0A1Y1N767   A0A0L7R5S2   A0A182HEW7   Q177P1   V5IK41   A0A026VVM1   A0A1E1X2E2   L7MED8   A0A087U3V4   A0A182NG76   A0A131Z4E0   A0A195F9H2   U5EYF6   A0A224YRD0   A0A2H8TV72   A0A131XHZ7   A0A0L0C6F5   A0A1I8MMP8   A0A2S2R005   A0A195E5W2   A0A1B0G1J1   A0A1A9UXZ8   A0A1A9Z1V2   B4NPI8   A0A1A9XRZ5   A0A1B0BK08   A0A182QY12   A0A2M4A9P2   A0A1I8NSN7   W5JUB5   A0A2M3ZGD5   A0A2M3Z1S0   A0A182FPY5   A0A2M4BDP0   Q7QKE3   A0A182HS16   A0A0M4F9R1   A0A1A9WXX6   X1WIP8   A0A182LQD4   A0A1L8DWR9   A0A182UP71   A0A182SFX9   A0A182KDU1   A0A1L8DWX1   A0A1J1J5C4   A0A293N4L4   A0A182W2K4   A0A182R7M4   E9FTX7   A0A182XVC6   B4MA47   A0A0K8WFG9   B3NVN4   A0A0A1X689   A0A182PEH1   Q9VWI2   A0A034VJH4   A0A182J3Q8   B4PZI3   A0A2R5LMW1  

EC Number

1.1.1.8

Pubmed

19121390    28756777    26354079    22118469    24845553    18362917    + More
19820115    28648823    20075255    21347285    20798317    28004739    21719571    26823975    21282665    25401762    30249741    20566863    26483478    17510324    25765539    24508170    28503490    25576852    26830274    28797301    28049606    26108605    25315136    17994087    20920257    23761445    12364791    14747013    17210077    20966253    21292972    25244985    18057021    25830018    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    17550304   

EMBL

BABH01022256    BABH01022257    KZ149916    PZC77948.1    ODYU01002868    SOQ40883.1    + More
KQ459585    KPI98216.1    AGBW02008992    OWR51952.1    KK852672    KDR18769.1    GECU01031862    JAS75844.1    KZ288202    PBC33529.1    KQ971338    EFA02495.1    GBYB01003290    GBYB01003291    JAG73057.1    JAG73058.1    NNAY01000856    OXU26184.1    AAZX01000215    KQ435737    KOX76948.1    KQ977791    KYM99915.1    KQ976476    KYM83848.1    ADTU01009482    ADTU01009483    ADTU01009484    KQ982093    KYQ60071.1    UFQS01000513    UFQT01000513    SSX04518.1    SSX24881.1    ODYU01002869    SOQ40885.1    GEDC01027081    JAS10217.1    UFQS01000608    UFQT01000608    SSX05324.1    SSX25685.1    GL441439    EFN64825.1    GEZM01010886    JAV93751.1    LBMM01000733    KMQ97613.1    GL888187    EGI65509.1    GDHC01021208    JAP97420.1    GL764458    EFZ17636.1    GBHO01001736    GBHO01001735    JAG41868.1    JAG41869.1    GEZM01010884    JAV93754.1    GDHC01010001    JAQ08628.1    GBRD01013982    JAG51844.1    GL449694    EFN82187.1    QOIP01000005    RLU22258.1    LJIG01002850    KRT84090.1    DS235078    EEB11459.1    GEZM01010885    JAV93752.1    KQ414648    KOC66230.1    JXUM01132778    KQ567891    KXJ69234.1    CH477373    EAT42377.1    GANP01000347    JAB84121.1    KK108118    EZA46879.1    GFAC01005765    JAT93423.1    GACK01002669    JAA62365.1    KK118034    KFM72043.1    GEDV01003566    JAP84991.1    KQ981727    KYN36699.1    GANO01002031    JAB57840.1    GFPF01005677    MAA16823.1    GFXV01006312    MBW18117.1    GEFH01001828    JAP66753.1    JRES01000940    KNC27009.1    GGMS01014138    MBY83341.1    KQ979592    KYN20585.1    CCAG010002137    CH964291    EDW86428.1    JXJN01015768    AXCN02001630    GGFK01004203    MBW37524.1    ADMH02000471    ETN66349.1    GGFM01006794    MBW27545.1    GGFM01001702    MBW22453.1    GGFJ01001787    MBW50928.1    AAAB01008799    EAA03779.3    APCN01000232    CP012528    ALC49337.1    ABLF02040094    ABLF02040101    ABLF02040106    ABLF02040107    GFDF01003184    JAV10900.1    GFDF01003185    JAV10899.1    CVRI01000073    CRL07613.1    GFWV01022622    MAA47349.1    GL732524    EFX89563.1    CH940655    EDW66106.1    KRF82563.1    GDHF01033695    GDHF01031825    GDHF01027382    GDHF01015353    GDHF01004443    GDHF01002482    GDHF01002480    GDHF01000171    JAI18619.1    JAI20489.1    JAI24932.1    JAI36961.1    JAI47871.1    JAI49832.1    JAI49834.1    JAI52143.1    CH954180    EDV46699.1    GBXI01007901    JAD06391.1    AE014298    BT014631    AAF48957.1    AAT27255.1    AHN59909.1    GAKP01016707    GAKP01016705    JAC42247.1    CM000162    EDX02139.1    GGLE01006747    MBY10873.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000027135    UP000192223    UP000242457    + More
UP000005203    UP000007266    UP000215335    UP000002358    UP000053105    UP000078542    UP000078540    UP000005205    UP000075809    UP000000311    UP000036403    UP000079169    UP000007755    UP000008237    UP000279307    UP000009046    UP000053825    UP000069940    UP000249989    UP000008820    UP000053097    UP000054359    UP000075884    UP000078541    UP000037069    UP000095301    UP000078492    UP000092444    UP000078200    UP000092445    UP000007798    UP000092443    UP000092460    UP000075886    UP000095300    UP000000673    UP000069272    UP000007062    UP000075840    UP000092553    UP000091820    UP000007819    UP000075882    UP000075903    UP000075901    UP000075881    UP000183832    UP000075920    UP000075900    UP000000305    UP000076408    UP000008792    UP000008711    UP000075885    UP000000803    UP000075880    UP000002282   

PRIDE

H9JI90   

Pfam

PF12569   NARP1        + More
PF13181   TPR_8
PF07555   NAGidase
PF07479   NAD_Gly3P_dh_C
PF01210   NAD_Gly3P_dh_N

Interpro

IPR021183   NatA_aux_su        + More
IPR013026   TPR-contain_dom       
IPR011990   TPR-like_helical_dom_sf       
IPR019734   TPR_repeat       
IPR017853   Glycoside_hydrolase_SF       
IPR011496   Beta-N-acetylglucosaminidase       
IPR036291   NAD(P)-bd_dom_sf       
IPR008927   6-PGluconate_DH-like_C_sf       
IPR006168   G3P_DH_NAD-dep       
IPR013328   6PGD_dom2       
IPR011128   G3P_DH_NAD-dep_N       
IPR006109   G3P_DH_NAD-dep_C       
IPR017751   G3P_DH_NAD-dep_euk       

SUPFAM

SSF48452   SSF48452        + More
SSF51445   SSF51445       
SSF48179   SSF48179       
SSF51735   SSF51735       

Gene 3D

1.10.1040.10    

ProteinModelPortal

H9JI90   A0A2W1BSB1   A0A2H1VJ79   A0A194PXZ9   A0A212FDY8   A0A067R5Y7   + More
A0A1B6HMF7   A0A1W4XAU5   A0A2A3EQW5   A0A1W4XBZ6   A0A087ZRP6   D2A0B9   A0A0C9R5T2   A0A232F5T2   K7J6S9   A0A0N0BI27   A0A195CGQ8   A0A195BGR2   A0A158N9D6   A0A151XIC8   A0A336KKR7   A0A2H1VJ75   A0A1B6C9Q1   A0A336M640   E2ANZ3   A0A1Y1N7A8   A0A0J7L4Z6   A0A3Q0ISG2   F4WJY7   A0A146KLI1   E9IP68   A0A0A9ZBP9   A0A1Y1N751   A0A146LKY9   A0A0K8SFC9   E2BPZ9   A0A3L8DR34   A0A0T6B9Q7   E0VDK3   A0A1Y1N767   A0A0L7R5S2   A0A182HEW7   Q177P1   V5IK41   A0A026VVM1   A0A1E1X2E2   L7MED8   A0A087U3V4   A0A182NG76   A0A131Z4E0   A0A195F9H2   U5EYF6   A0A224YRD0   A0A2H8TV72   A0A131XHZ7   A0A0L0C6F5   A0A1I8MMP8   A0A2S2R005   A0A195E5W2   A0A1B0G1J1   A0A1A9UXZ8   A0A1A9Z1V2   B4NPI8   A0A1A9XRZ5   A0A1B0BK08   A0A182QY12   A0A2M4A9P2   A0A1I8NSN7   W5JUB5   A0A2M3ZGD5   A0A2M3Z1S0   A0A182FPY5   A0A2M4BDP0   Q7QKE3   A0A182HS16   A0A0M4F9R1   A0A1A9WXX6   X1WIP8   A0A182LQD4   A0A1L8DWR9   A0A182UP71   A0A182SFX9   A0A182KDU1   A0A1L8DWX1   A0A1J1J5C4   A0A293N4L4   A0A182W2K4   A0A182R7M4   E9FTX7   A0A182XVC6   B4MA47   A0A0K8WFG9   B3NVN4   A0A0A1X689   A0A182PEH1   Q9VWI2   A0A034VJH4   A0A182J3Q8   B4PZI3   A0A2R5LMW1  

PDB

6C9M     E-value=0,     Score=1863

KEGG

101738328    K20792 N-alpha-acetyltransferase 15/16, NatA auxiliary subunit | (RefSeq) N-alpha-acetyltransferase

GO

GO:0016740   GO:0017196   GO:0031415   GO:0005737   GO:0016021   GO:0042803   GO:0004367   GO:0005975   GO:0009331   GO:0051287   GO:0046168   GO:0016746   GO:0031248   GO:0005515   GO:0008270   GO:0016787   GO:0006508   GO:0005198   GO:0005576   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

Length:

594

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00500999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00018

outside

1  -  594

 

 

Pi

221.294451

Theta

153.707974

Tajima's D

0.419616

CLR

0.823035

CSRT

0.492575371231438

Interpretation

Uncertain