Gene

KWMTBOMO08323  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009241

Annotation

PREDICTED:_N-alpha-acetyltransferase_15?_NatA_auxiliary_subunit_[Papilio_xuthus]

Location

Bomo_Chr14(-):5520740-5528154      View in EpiBrowser

Full name

Glycerol-3-phosphate dehydrogenase [NAD(+)]      

Location in the cell

Cytoplasmic   Reliability : 2.233

CDS

ATGGGAACTAAAAAAAAAAACCTAGCGCCTTCAGAATTAAAAAAGCTTAGAAATAAACAAAGGAAAGCCCAGCGTAAAGCAGAGCAAGAAAGCGCTCTGGCGGCACAAGTACAGGTAAAACGGGAGCAGCACCATAAAGCGCGGCAACAGCAGGAACAAGGCGACCCCGAAGCGCCGCAACTCGACGAACTGATACCCGAGAAACTAGCGAGAGTAGAAGATCCATTAGAACAAGCATTGAAATTCTTGCAGCCTCTGAGGATACTCGCGGCGGACAGGATAGAGACACACCTAATGGCCTTCGAAATTTACTTTAGAAAAGAAAAGCCCCTACTGATGCTGCAGTGTATAAAGAGAGCGTGGAGATTGGACAGCGATAATCCTGAGCTGGTGGACTGTCTGGTTCGTTTCCAACGGTGGCTGGAGGAATCGCTTTCCGGGCTGCATCCGAACGTTGCGGCCGTTCTTAAGACTGAGACCCAACCGATGGTGTTGGGACGCAGCGCGCTGCAGATCGCGGAGCAGAGCGTGTCGGGCGCGGCGCGGCACGCGGCGGCGCTGTGGGCGGCGCGCGCGCTGCGGCGGCTCGTGCCCGACCGCACGGAGCAGGCGCTGCGCCTCGTCACCTCGCTCGACTACCCGGACGTCACTATACAGAGTTGCGCAGACGTTTTAGAGAGCCTCAGAGAAGGCGATTTCGGTGAATGCGAGGCGGTGATTGAGCGCTACGTGGAGGCGTGCAGCGCGCGGTTCCCGTACGCGATCGCCTTCAAGCCCGCGCCCGCGCCCGAAGCGAGCGAGAACCATTCGGAAGAGACTACACCGCTACAGCCTAAAGAAATTACTGCCAACAACTAA

Protein

MGTKKKNLAPSELKKLRNKQRKAQRKAEQESALAAQVQVKREQHHKARQQQEQGDPEAPQLDELIPEKLARVEDPLEQALKFLQPLRILAADRIETHLMAFEIYFRKEKPLLMLQCIKRAWRLDSDNPELVDCLVRFQRWLEESLSGLHPNVAAVLKTETQPMVLGRSALQIAEQSVSGAARHAAALWAARALRRLVPDRTEQALRLVTSLDYPDVTIQSCADVLESLREGDFGECEAVIERYVEACSARFPYAIAFKPAPAPEASENHSEETTPLQPKEITANN

Catalytic Activity

NAD(+) + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H(+) + NADH

Similarity

Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.

Uniprot

H9JI91   A0A2W1BZ33   A0A2H1W3K0   A0A437BS50   D2A0B9   F4WJY5   + More
E9IP70   A0A0L7R5V7   A0A232F6C0   E2ANZ6   N6UMP0   E2BPZ7   A0A2J7PPV0   A0A0J7L4R9   N6TQQ6   A0A0N0U6I2   A0A087ZRP7   A0A1B0FY46   A0A158N9D6   A0A026VVM1   A0A3L8DR34   A0A195BGR2   A0A195CGQ8   A0A151XIC8   A0A195E5W2   A0A195F9H2   A0A0C9R5T2   A0A1Y1N751   A0A1W4XAU5   A0A2A3EQW5   A0A1L8DWR9   A0A1L8DWX1   A0A1B0CM67   V5GPW5   W8BNC4   A0A0L0C6F5   A0A0A1X689   A0A1A9WXX6   A0A336KKR7   T1P942   A0A1I8MMP8   A0A1A9XRZ5   A0A1B0BK08   U5EYF6   A0A1B0G1J1   A0A034VJH4   A0A1A9Z1V2   E0VDK3   A0A1I8NSN7   A0A1A9UXZ8   T1INF4   A0A0K8WFG9   B3MPT7   A0A2S2NLB3   B4PZI3   Q9VWI2   B3NVN4   A0A1W4VTE2   B4NPI8   A0A2S2R005   X1WIP8   A0A1B6MQ90   B4L6X3   Q29IV7   B4GW65   A0A2H8TV72   A0A182HEW7   A0A3B0KTD8   A0A3B0K712   A0A023F378   A0A087U3V4   A0A2R7WIZ7   A0A0M4F9R1   A0A336M640   A0A1Q3F3K0   A0A182QY12   A0A1S3JLG3   A0A1B6F8C2   Q177P1   A0A069DZM3   A0A1B6EDW5   A0A224XED0   A0A1W4XBZ6   B4MA47   A0A1J1J5C4   B7P5N3   A0A0P4VJF5   B4JX27   A0A1Y1N7A8   A0A0P6FVD5   A0A182NG76   A0A0N8CFZ0   A0A0P4YQ39   A0A0P5YCM2   A0A0P5QYP9   A0A0P6HXS5   V5IK41  

EC Number

1.1.1.8

Pubmed

19121390    28756777    18362917    19820115    21719571    21282665    + More
28648823    20798317    23537049    21347285    24508170    30249741    28004739    24495485    26108605    25830018    25315136    25348373    20566863    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    18057021    15632085    23185243    26483478    25474469    17510324    26334808    27129103    25765539   

EMBL

BABH01022251    KZ149916    PZC77946.1    ODYU01005810    SOQ47074.1    RSAL01000016    + More
RVE53059.1    KQ971338    EFA02495.1    GL888187    EGI65507.1    GL764458    EFZ17627.1    KQ414648    KOC66228.1    NNAY01000856    OXU26185.1    GL441439    EFN64828.1    APGK01008041    KB737564    KB632337    ENN83000.1    ERL92856.1    GL449694    EFN82185.1    NEVH01022644    PNF18368.1    LBMM01000733    KMQ97611.1    APGK01009386    KB737932    ENN82834.1    KQ435737    KOX76951.1    AJVK01005172    AJVK01005173    AJVK01005174    ADTU01009482    ADTU01009483    ADTU01009484    KK108118    EZA46879.1    QOIP01000005    RLU22258.1    KQ976476    KYM83848.1    KQ977791    KYM99915.1    KQ982093    KYQ60071.1    KQ979592    KYN20585.1    KQ981727    KYN36699.1    GBYB01003290    GBYB01003291    JAG73057.1    JAG73058.1    GEZM01010884    JAV93754.1    KZ288202    PBC33529.1    GFDF01003184    JAV10900.1    GFDF01003185    JAV10899.1    AJWK01018284    AJWK01018285    AJWK01018286    AJWK01018287    GALX01002292    JAB66174.1    GAMC01006239    GAMC01006238    JAC00318.1    JRES01000940    KNC27009.1    GBXI01007901    JAD06391.1    UFQS01000513    UFQT01000513    SSX04518.1    SSX24881.1    KA645227    AFP59856.1    JXJN01015768    GANO01002031    JAB57840.1    CCAG010002137    GAKP01016707    GAKP01016705    JAC42247.1    DS235078    EEB11459.1    JH431165    GDHF01033695    GDHF01031825    GDHF01027382    GDHF01015353    GDHF01004443    GDHF01002482    GDHF01002480    GDHF01000171    JAI18619.1    JAI20489.1    JAI24932.1    JAI36961.1    JAI47871.1    JAI49832.1    JAI49834.1    JAI52143.1    CH902621    EDV44699.1    GGMR01005361    MBY17980.1    CM000162    EDX02139.1    AE014298    BT014631    AAF48957.1    AAT27255.1    AHN59909.1    CH954180    EDV46699.1    CH964291    EDW86428.1    GGMS01014138    MBY83341.1    ABLF02040094    ABLF02040101    ABLF02040106    ABLF02040107    GEBQ01001859    JAT38118.1    CH933812    EDW06119.1    KRG07152.1    CH379063    EAL32546.1    KRT06111.1    CH479193    EDW26910.1    GFXV01006312    MBW18117.1    JXUM01132778    KQ567891    KXJ69234.1    OUUW01000044    SPP89999.1    SPP89997.1    GBBI01002847    JAC15865.1    KK118034    KFM72043.1    KK854884    PTY19479.1    CP012528    ALC49337.1    UFQS01000608    UFQT01000608    SSX05324.1    SSX25685.1    GFDL01012909    JAV22136.1    AXCN02001630    GECZ01023280    JAS46489.1    CH477373    EAT42377.1    GBGD01000390    JAC88499.1    GEDC01013290    GEDC01001201    JAS24008.1    JAS36097.1    GFTR01008278    JAW08148.1    CH940655    EDW66106.1    KRF82563.1    CVRI01000073    CRL07613.1    ABJB010188807    ABJB010509865    ABJB011040524    ABJB011050110    DS642090    EEC01905.1    GDKW01001471    JAI55124.1    CH916376    EDV95303.1    GEZM01010886    JAV93751.1    GDIQ01042247    JAN52490.1    GDIP01135527    JAL68187.1    GDIP01225368    JAI98033.1    GDIP01060938    JAM42777.1    GDIQ01116982    JAL34744.1    GDIQ01028250    JAN66487.1    GANP01000347    JAB84121.1   

Proteomes

UP000005204    UP000283053    UP000007266    UP000007755    UP000053825    UP000215335    + More
UP000000311    UP000019118    UP000030742    UP000008237    UP000235965    UP000036403    UP000053105    UP000005203    UP000092462    UP000005205    UP000053097    UP000279307    UP000078540    UP000078542    UP000075809    UP000078492    UP000078541    UP000192223    UP000242457    UP000092461    UP000037069    UP000091820    UP000095301    UP000092443    UP000092460    UP000092444    UP000092445    UP000009046    UP000095300    UP000078200    UP000007801    UP000002282    UP000000803    UP000008711    UP000192221    UP000007798    UP000007819    UP000009192    UP000001819    UP000008744    UP000069940    UP000249989    UP000268350    UP000054359    UP000092553    UP000075886    UP000085678    UP000008820    UP000008792    UP000183832    UP000001555    UP000001070    UP000075884   

PRIDE

H9JI91   

Pfam

PF12569   NARP1        + More
PF13181   TPR_8
PF12678   zf-rbx1
PF07479   NAD_Gly3P_dh_C
PF01210   NAD_Gly3P_dh_N

Interpro

IPR021183   NatA_aux_su        + More
IPR013026   TPR-contain_dom       
IPR011990   TPR-like_helical_dom_sf       
IPR019734   TPR_repeat       
IPR024766   Znf_RING_H2       
IPR013083   Znf_RING/FYVE/PHD       
IPR036291   NAD(P)-bd_dom_sf       
IPR008927   6-PGluconate_DH-like_C_sf       
IPR006168   G3P_DH_NAD-dep       
IPR013328   6PGD_dom2       
IPR011128   G3P_DH_NAD-dep_N       
IPR006109   G3P_DH_NAD-dep_C       
IPR017751   G3P_DH_NAD-dep_euk       

SUPFAM

SSF48452   SSF48452        + More
SSF48179   SSF48179       
SSF51735   SSF51735       

Gene 3D

3.30.40.10     1.10.1040.10    

ProteinModelPortal

H9JI91   A0A2W1BZ33   A0A2H1W3K0   A0A437BS50   D2A0B9   F4WJY5   + More
E9IP70   A0A0L7R5V7   A0A232F6C0   E2ANZ6   N6UMP0   E2BPZ7   A0A2J7PPV0   A0A0J7L4R9   N6TQQ6   A0A0N0U6I2   A0A087ZRP7   A0A1B0FY46   A0A158N9D6   A0A026VVM1   A0A3L8DR34   A0A195BGR2   A0A195CGQ8   A0A151XIC8   A0A195E5W2   A0A195F9H2   A0A0C9R5T2   A0A1Y1N751   A0A1W4XAU5   A0A2A3EQW5   A0A1L8DWR9   A0A1L8DWX1   A0A1B0CM67   V5GPW5   W8BNC4   A0A0L0C6F5   A0A0A1X689   A0A1A9WXX6   A0A336KKR7   T1P942   A0A1I8MMP8   A0A1A9XRZ5   A0A1B0BK08   U5EYF6   A0A1B0G1J1   A0A034VJH4   A0A1A9Z1V2   E0VDK3   A0A1I8NSN7   A0A1A9UXZ8   T1INF4   A0A0K8WFG9   B3MPT7   A0A2S2NLB3   B4PZI3   Q9VWI2   B3NVN4   A0A1W4VTE2   B4NPI8   A0A2S2R005   X1WIP8   A0A1B6MQ90   B4L6X3   Q29IV7   B4GW65   A0A2H8TV72   A0A182HEW7   A0A3B0KTD8   A0A3B0K712   A0A023F378   A0A087U3V4   A0A2R7WIZ7   A0A0M4F9R1   A0A336M640   A0A1Q3F3K0   A0A182QY12   A0A1S3JLG3   A0A1B6F8C2   Q177P1   A0A069DZM3   A0A1B6EDW5   A0A224XED0   A0A1W4XBZ6   B4MA47   A0A1J1J5C4   B7P5N3   A0A0P4VJF5   B4JX27   A0A1Y1N7A8   A0A0P6FVD5   A0A182NG76   A0A0N8CFZ0   A0A0P4YQ39   A0A0P5YCM2   A0A0P5QYP9   A0A0P6HXS5   V5IK41  

PDB

6C9M     E-value=1.04319e-36,     Score=383

KEGG

101738328    K20792 N-alpha-acetyltransferase 15/16, NatA auxiliary subunit | (RefSeq) N-alpha-acetyltransferase

GO

GO:0017196   GO:0016740   GO:0031415   GO:0005737   GO:0016021   GO:0016746   GO:0031248   GO:0005840   GO:0008270   GO:0042803   GO:0004367   GO:0005975   GO:0009331   GO:0051287   GO:0046168  

Length:

285

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00052

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06728

outside

1  -  285

 

 

Pi

22.035169

Theta

184.752585

Tajima's D

-1.719647

CLR

1228.963395

CSRT

0.0368981550922454

Interpretation

Possibly Positive selection