SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08320
Pre Gene Modal
BGIBMGA009243
Annotation
Uncharacterized_protein_OBRU01_10145_[Operophtera_brumata]
Location in the cell
Mitochondrial   Reliability : 2.296
 

Sequence

CDS
ATGCCACGGTGTATCCAGATCTATTTTCCCAAACATGTCATAAAGCACTCGCTTTCCATCAAATTCTTCTTTCTAGTAAGCTGTTCGAGCCTCTTCCTATCACTAGTTTGGATACAGCTCTACTGTGATACCGAATCGTCCAGGGTCACTGCAAGTCTCGTAGAAGAAGCCCTCGAAAATGTTTCCAAGGATCTCCGTTATTCGGATGTTTATAGGAAGACTAGCAAGCTACCGAAGTTCATCAAGTATATCCTGCTATGGACAAGGCAAGATTTTGCTCCTTTTTATTTCCTCGGGCAAGGTCAACGGGCTTTCCTCAAAAACAATTGCTCGGTGATAAATTGCTACATAACAACTGACAGGAAATTCTTCGGTGGCGATCTCACGAAGTTTGACGGGATAGCGTTCAATGGTCGAAATATGAAAAGTTCAGATTTGCCGAGAATCCGTACGGGAAAACAGAAATATGTGTTCTTCAACATGGAGTCTGCGGAAAATTTTCCCGTTTGCAGCGAAAAGTTCGATGGGTTTTTCAATTGGACAGCCACTTATAGACTGGATTCAGATATTCCGTTCCCATATATACAAATAAGAAATATTAATGGTGAGATCGTTGGTCCGAAGAAAGAAATGGTATGGGCGGACGACTTTTCGGAGATTGATGAAGATCTGTCCTTGAAAATTGCCAATAAGACTAAAGCAGCTGCTTGGTTCGTCTCTAATTGTAAGAGTAAAAGCGGACGAAAGAAATTTGTGGATGATTTACAAAGGGCCTTAAATCGATTTAAATATTCTATCGATATTTACGGATCGTGTGGAAAGTTAAAATGTCCAAGGGACAAGAATAACGATTGTCATTCGCTGTTGGAAAAAGATTACTATTTTTATTTATCGTTAGAGAATACGTTTGCGGAAGATTATGTCACAGAGAAGTTGTTAACTGCATTACAGCATGACGTAGTGCCGATAGTGTATGGCGGAGCGAATTATTCTAGGTTTCTTCCACCTGGCTCTTACATCGACGGGAGAAGATACAAGCCCGCTCAACTTGCGGAAATTATGAACAAACTCATGAAAAATCACAAGTTGTACGCCGAATATTTCCGTTGGAAGAAGCACTACACGTACCACGACCCTTCGGAGGTGGACAACGTTTGTGCTCTCTGTAAGGCATTGAATAACAAAAAAATGGCCAGTCCCAATACTTATTATCAGTTCAGGAAGTGGTGGCATCCAGAATTCAAGAGATTGTGTTAG
Protein
MPRCIQIYFPKHVIKHSLSIKFFFLVSCSSLFLSLVWIQLYCDTESSRVTASLVEEALENVSKDLRYSDVYRKTSKLPKFIKYILLWTRQDFAPFYFLGQGQRAFLKNNCSVINCYITTDRKFFGGDLTKFDGIAFNGRNMKSSDLPRIRTGKQKYVFFNMESAENFPVCSEKFDGFFNWTATYRLDSDIPFPYIQIRNINGEIVGPKKEMVWADDFSEIDEDLSLKIANKTKAAAWFVSNCKSKSGRKKFVDDLQRALNRFKYSIDIYGSCGKLKCPRDKNNDCHSLLEKDYYFYLSLENTFAEDYVTEKLLTALQHDVVPIVYGGANYSRFLPPGSYIDGRRYKPAQLAEIMNKLMKNHKLYAEYFRWKKHYTYHDPSEVDNVCALCKALNNKKMASPNTYYQFRKWWHPEFKRLC

Summary

Similarity
Belongs to the glycosyltransferase 10 family.
EMBL
BABH01022242    JTDY01001793    KOB72859.1    KZ149916    PZC77942.1    ODYU01001405    + More
SOQ37538.1    JTDY01001718    KOB73086.1    AGBW02011221    OWR47017.1    RSAL01000016    RVE53056.1    JTDY01005919    KOB66482.1    NWSH01004327    PCG65224.1    KQ460627    KPJ13478.1    KPJ13477.1    KQ459585    KPI98210.1    KQ461137    KPJ08813.1    AGBW02010417    OWR48543.1    ODYU01003079    SOQ41387.1    NWSH01002952    PCG67232.1    AGBW02008995    OWR51946.1    RSAL01000031    RVE51638.1    RSAL01000164    RVE45329.1    RSAL01000116    RVE46859.1    JTDY01009552    KOB63349.1    JTDY01010816    KOB57987.1    RVE51643.1    ODYU01013118    SOQ59805.1    PCG67231.1    RVE51644.1    ODYU01003471    SOQ42305.1    RVE51641.1    RVE51642.1    KQ461108    KPJ09317.1    RVE53051.1    KQ459594    KPI96064.1    PZC77935.1    PCG67233.1    PZC77933.1    ODYU01008712    SOQ52539.1    BABH01022215    RVE53050.1    AGBW02010111    OWR49153.1    KZ150145    PZC72905.1    NWSH01003936    PCG65653.1    NWSH01000372    PCG76878.1    AGBW02008491    OWR53234.1    RVE53053.1    ODYU01003968    SOQ43373.1    PZC77936.1    JTDY01006679    KOB65783.1    RVE53052.1    ODYU01001860    SOQ38649.1    KQ761844    OAD56586.1    NWSH01004476    PCG65062.1    ODYU01000952    SOQ36485.1    KQ414617    KOC68244.1    KZ288185    PBC34965.1    AM279413    CAK50261.1    JTDY01005492    KOB66945.1    KQ434977    KZC12838.1    GDIP01114408    JAL89306.1    GDIP01002675    JAN01041.1    GDIQ01093775    JAL57951.1    GDIP01109554    JAL94160.1    LRGB01000868    KZS15541.1    GDIQ01012846    JAN81891.1    GDIQ01076840    JAN17897.1    GDIQ01002877    JAN91860.1    GDIP01107297    JAL96417.1    ATLV01026273    KE525409    KFB52971.1    GDIQ01183544    JAK68181.1    GDIQ01146178    JAL05548.1    GDIP01038939    JAM64776.1    KFB52972.1    GDIQ01067914    GDIQ01013905    JAN80832.1    ADTU01005498    ADTU01005499    ADTU01005500    GL767018    EFZ14350.1    APCN01001363    AAAB01008846    EAA06326.5    GDIQ01217631    JAK34094.1    GDIP01007183    JAM96532.1    GL450575    EFN80802.1    KQ981250    KYN44218.1    GDIQ01114275    JAL37451.1    GDIQ01083834    JAN10903.1    GDIP01167237    JAJ56165.1   
Pfam
PF00852   Glyco_transf_10        + More
PF17039   Glyco_tran_10_N
Interpro
IPR031481   Glyco_tran_10_N        + More
IPR001503   Glyco_trans_10       
IPR038577   GT10-like_sf       
Gene 3D
PDB
2NZY     E-value=0.0717662,     Score=84

Ontologies

Topology

Subcellular location
  
Length:
418
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.40686
Exp number, first 60 AAs:
19.38091
Total prob of N-in:
0.89952
POSSIBLE N-term signal
sequence
inside
1  -  18
TMhelix
19  -  41
outside
42  -  418
 
 

Population Genetic Test Statistics

Pi
169.017654
Theta
151.384066
Tajima's D
0.341131
CLR
278.906527
CSRT
0.462626868656567
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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