Gene

KWMTBOMO08313

Pre Gene Modal

BGIBMGA009247

Annotation

PREDICTED:_alpha-(1?3)-fucosyltransferase_C-like_[Amyelois_transitella]

Location

Bomo_Chr14(-):5087948-5091314      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.204 Mitochondrial   Reliability : 1.427

CDS

ATGAGCTATCAATGGCCTGACCGAATGGAAGCCATCATTGATCCCGTGTTCAGAGAGGAGCTGAACTCAAAAGCCAAAGGAGTCCTTACCTTTCTTGACAAATGCCAGAGTAGAAGCAAAAGAGAGGTGTTCTTGAAGAACCTTCAGAATGAATTATCAAAATATAACCTGACTGTGGATATTTTTGGTAAATGTGGTCGAGCCTGCAGCCCGAGACGTAAGTCAATGAAACCATGTTTCTGGAAATTGAGGAAGGATTATTTCTTCTATTTGGCAATGGAAGATTCTTTCGCTAAAGATTTTATGACCGATAGCGTACTTTATGGGTTAAAGTATAATTCAGTGCCTATCGTTTACGGGAAGGCTGATTATGACAAATTTCTACCACCGAATTCATACATTAACGCTATGGAACTTGGAGAAGAGAAATTAGCAAAAACAATAAACACGATTATGAGAAACATGCAAATTTACTACGAGTTCTTCGCGTGGAGGAACCATTACGCCGTCAGGGAAATGCAGGTCCTTGACCCTTGCTCTTTGTGCGATGCTTTAAATAAACCCGAGTGGTTGGAGTACCGGTGGAGTCACAGTCAATTCAGGAATTGGTGGAACCCTGAATACGAGGACCGATGCCCGTTTTATAGTAAATATTTAACGCTTTAA

Protein

MSYQWPDRMEAIIDPVFREELNSKAKGVLTFLDKCQSRSKREVFLKNLQNELSKYNLTVDIFGKCGRACSPRRKSMKPCFWKLRKDYFFYLAMEDSFAKDFMTDSVLYGLKYNSVPIVYGKADYDKFLPPNSYINAMELGEEKLAKTINTIMRNMQIYYEFFAWRNHYAVREMQVLDPCSLCDALNKPEWLEYRWSHSQFRNWWNPEYEDRCPFYSKYLTL

Similarity

Belongs to the glycosyltransferase 10 family.

Uniprot

H9JI97   A0A3S2PJA5   A0A212FHM7   A0A2H1V6K5   A0A212F4A2   A0A3S2LG40   + More
A0A0L7KT82   A0A194R7I6   A0A2W1BS87   A0A194QTG1   A0A3S2NPV0   A0A212FDW4   A0A0L7LD09   A0A194R6N8   A0A194R740   A0A194QV22   H9JI93   A0A212EZY5   A0A2H1V9M8   A0A212FE36   A0A2H1V6R4   A0A194PTI0   A0A194Q472   A0A2A4J2A2   A0A2A4J733   A0A2H1WPY7   A0A0L7KKB0   A0A3S2LHN9   A0A0L7K4N4   A0A212EPM2   A0A2H1VN94   A0A2H1X3C4   A0A2W1C1F3   A0A2A4J5A9   A0A2A4J5I4   A0A2H1VKP0   A0A3S2NZG0   A0A3S2LQB6   A0A3S2M564   A0A3S2M779   A0A0L7LBT7   A0A2A4J0X4   A0A2W1BZ24   A0A3S2NK67   A0A2W1BWB4   A0A2H1WHJ5   A0A2A4JYW9   A0A437BMJ2   A0A2H1VCS8   A0A3S2PHJ4   A0A437BN03   A0A2A4J738   A0A2A4J2N7   A0A212F5Z8   A0A2W1BGR4   A0A154PNF0   U5EV02   A0A194PY00   A0A2A4J121   A0A2H1VDQ5   E9HNE7   E9HNE2   A0A0P5JKQ6   A0A3S2NI47   E9IYL6   A0A0P5IGH3   A0A194R892   A0A0P5NF53   A0A0P5MPQ9   A0A310SMV6   A0A0P6G0S5   A0A0P5H7W2   A0A0P5KZU0   A0A0P5PYI1   A0A0P6GR73   A0A0P5T191   A0A0P6GWX6   A0A0P5P0I8   A0A0P6DCY4   A0A1D2MJA3   A0A1W4WDM3   A0A0P5NT39   A0A0P6HBD3   A0A1W4WCP4   E2AUH5   A0A0P5VXP3   A0A0P5WXM8   A0A0P5JXK7   A0A0P5CWM3   A0A2H1VRA0   B4L403   A0A0P6CTY6   A0A0P5SV44   E9FXZ7   A0A0P5BKE4   E2BU28   A0A0P5HM40   A0A0P5N0G2   A0A0P5VKZ5   D6WT64  

Pubmed

19121390    22118469    26227816    26354079    28756777    21292972    + More
21282665    27289101    20798317    17994087    18362917    19820115   

EMBL

BABH01022212    RSAL01000016    RVE53050.1    AGBW02008491    OWR53234.1    ODYU01000952    + More
SOQ36485.1    AGBW02010417    OWR48543.1    RVE53056.1    JTDY01005919    KOB66482.1    KQ460627    KPJ13479.1    KZ149916    PZC77942.1    KQ461137    KPJ08813.1    RSAL01000164    RVE45329.1    AGBW02008995    OWR51946.1    JTDY01001718    KOB73086.1    KPJ13478.1    KPJ13477.1    KQ461108    KPJ09317.1    BABH01022242    AGBW02011221    OWR47017.1    ODYU01001405    SOQ37538.1    OWR51947.1    SOQ36489.1    KQ459594    KPI96064.1    KQ459585    KPI98210.1    NWSH01003936    PCG65654.1    NWSH01002952    PCG67232.1    ODYU01010180    SOQ55129.1    JTDY01009552    KOB63349.1    RSAL01000116    RVE46859.1    JTDY01010816    KOB57987.1    AGBW02013437    OWR43438.1    ODYU01003471    SOQ42305.1    ODYU01013118    SOQ59805.1    PZC77933.1    NWSH01003242    PCG66704.1    PCG67231.1    ODYU01003079    SOQ41387.1    RVE53053.1    RSAL01000031    RVE51640.1    RVE51643.1    RVE53052.1    JTDY01001793    KOB72859.1    NWSH01004476    PCG65062.1    PZC77936.1    RVE53051.1    PZC77935.1    ODYU01008712    SOQ52539.1    NWSH01000372    PCG76878.1    RVE51644.1    ODYU01001860    SOQ38649.1    RVE51641.1    RVE51638.1    PCG67233.1    PCG65653.1    AGBW02010111    OWR49153.1    KZ150145    PZC72905.1    KQ434977    KZC12838.1    GANO01003632    JAB56239.1    KPI98207.1    NWSH01004327    PCG65224.1    ODYU01002011    SOQ38990.1    GL732695    EFX66744.1    EFX66743.1    GDIQ01198740    JAK52985.1    RVE51642.1    GL767018    EFZ14350.1    GDIQ01215036    JAK36689.1    KPJ13475.1    GDIQ01153764    JAK97961.1    GDIQ01153765    JAK97960.1    KQ761844    OAD56586.1    GDIQ01040217    JAN54520.1    GDIQ01230053    JAK21672.1    GDIQ01178058    JAK73667.1    GDIQ01122417    JAL29309.1    GDIQ01029575    JAN65162.1    GDIQ01097525    JAL54201.1    GDIQ01040218    JAN54519.1    GDIQ01156313    JAK95412.1    GDIQ01080709    JAN14028.1    LJIJ01001068    ODM93136.1    GDIQ01144871    JAL06855.1    GDIQ01022109    JAN72628.1    GL442820    EFN62934.1    GDIP01093781    JAM09934.1    GDIP01080086    JAM23629.1    GDIQ01193841    JAK57884.1    GDIP01164396    JAJ59006.1    ODYU01003968    SOQ43373.1    CH933810    EDW07281.1    GDIP01003226    JAN00490.1    GDIP01134841    JAL68873.1    GL732526    EFX88202.1    GDIP01198295    JAJ25107.1    GL450575    EFN80802.1    GDIQ01248391    JAK03334.1    GDIQ01150964    JAL00762.1    GDIP01113298    LRGB01001229    JAL90416.1    KZS13314.1    KQ971354    EFA05857.2   

Proteomes

UP000005204    UP000283053    UP000007151    UP000037510    UP000053240    UP000053268    + More
UP000218220    UP000076502    UP000000305    UP000094527    UP000192221    UP000000311    UP000009192    UP000008237    UP000076858    UP000007266   

PRIDE

H9JI97    H9JI93   

Pfam

PF00852   Glyco_transf_10        + More
PF17039   Glyco_tran_10_N

Interpro

IPR038577   GT10-like_sf        + More
IPR001503   Glyco_trans_10       
IPR031481   Glyco_tran_10_N       

Gene 3D

3.40.50.11660    

ProteinModelPortal

H9JI97   A0A3S2PJA5   A0A212FHM7   A0A2H1V6K5   A0A212F4A2   A0A3S2LG40   + More
A0A0L7KT82   A0A194R7I6   A0A2W1BS87   A0A194QTG1   A0A3S2NPV0   A0A212FDW4   A0A0L7LD09   A0A194R6N8   A0A194R740   A0A194QV22   H9JI93   A0A212EZY5   A0A2H1V9M8   A0A212FE36   A0A2H1V6R4   A0A194PTI0   A0A194Q472   A0A2A4J2A2   A0A2A4J733   A0A2H1WPY7   A0A0L7KKB0   A0A3S2LHN9   A0A0L7K4N4   A0A212EPM2   A0A2H1VN94   A0A2H1X3C4   A0A2W1C1F3   A0A2A4J5A9   A0A2A4J5I4   A0A2H1VKP0   A0A3S2NZG0   A0A3S2LQB6   A0A3S2M564   A0A3S2M779   A0A0L7LBT7   A0A2A4J0X4   A0A2W1BZ24   A0A3S2NK67   A0A2W1BWB4   A0A2H1WHJ5   A0A2A4JYW9   A0A437BMJ2   A0A2H1VCS8   A0A3S2PHJ4   A0A437BN03   A0A2A4J738   A0A2A4J2N7   A0A212F5Z8   A0A2W1BGR4   A0A154PNF0   U5EV02   A0A194PY00   A0A2A4J121   A0A2H1VDQ5   E9HNE7   E9HNE2   A0A0P5JKQ6   A0A3S2NI47   E9IYL6   A0A0P5IGH3   A0A194R892   A0A0P5NF53   A0A0P5MPQ9   A0A310SMV6   A0A0P6G0S5   A0A0P5H7W2   A0A0P5KZU0   A0A0P5PYI1   A0A0P6GR73   A0A0P5T191   A0A0P6GWX6   A0A0P5P0I8   A0A0P6DCY4   A0A1D2MJA3   A0A1W4WDM3   A0A0P5NT39   A0A0P6HBD3   A0A1W4WCP4   E2AUH5   A0A0P5VXP3   A0A0P5WXM8   A0A0P5JXK7   A0A0P5CWM3   A0A2H1VRA0   B4L403   A0A0P6CTY6   A0A0P5SV44   E9FXZ7   A0A0P5BKE4   E2BU28   A0A0P5HM40   A0A0P5N0G2   A0A0P5VKZ5   D6WT64  

KEGG

101737386    K14464 alpha-1,3-fucosyltransferase [EC:2.4.1.-] | (RefSeq) alpha-(1,3)-fucosyltransferase C-like

PATHWAY

01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0032580   GO:0006486   GO:0016021   GO:0008417   GO:0016757   GO:0046920   GO:0036065   GO:0016020   GO:0005634   GO:0006355   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR11929  

Subcellular location

  

Length:

221

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00364

Exp number, first 60 AAs:

0

Total prob of N-in:

0.11539

outside

1  -  221

 

 

Pi

42.903031

Theta

164.767095

Tajima's D

-1.651911

CLR

377.958174

CSRT

0.0443477826108695

Interpretation

Possibly Positive selection