Gene

KWMTBOMO08299  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009534

Annotation

PREDICTED:_cytoskeleton-associated_protein_5-like_[Bombyx_mori]

Location

Bomo_Chr14(-):4631704-4642708      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.491 Nuclear   Reliability : 1.596

CDS

ATGATATCAGCTGACACTATACCGCAGGCGGAATACGAGGAGGAAGAGGAGGAGGAAGAACAACAACCTCCACCGCCCGTGAACGTTGCACCGCTGGAACCGAGAGTCATTACCGGCCCGTTCGGTCTAGATCCAGACCTGATAGCACAGTTAGACGCAGCAGTTCCCTCAGTACGGAGGCCAGAACTAGCTCAGCCAGACTTGAAATTTTTGGACGACCCTGTGCCCGTTGGAGGCATGAGGAAACCCACCGTCCAACCAGTCAGGGCCAGCATAGTGCCGCCGTCGCCGGGCCGCCCCGCGCCCGCGCCGGCCGCGCCGCCCTGTGCCGTCGACGACGCGCAACTCGCGGACACCATCCACTCCATATCCAGCCCCGACCTCAATGCCGCCATGCGCGCGTTGTCGCTGATCTCCGGCGTGGTGGTGTCGGGGCGCGGCGCGGCGCTGGGCGCGCACGAGCAGCGGCTGGTGGCGGCGGTGGCGGCGCAGCTGCGGCGGCTGCGGGCCGCGCCCCCCGCCCCAGCGCACGACGCGCTCTCCGCCTACAAGTGCCTCGCGGGGGTGCTCACCAATTTCTACGACACAGCCGGCTGCGGCTCGCAAGTGGGCGAGAGCGCGTTGTGCTGCCTGCTGGGGGAGCTGCTCCGCGTGCTGGGCGCGGGGGGCGCGGCGGGGGCGGCGGGGGGCGCGGACGCCGAGCGGCTCGTGCGCATCCTCAACAACGTGTGCGTGCGCGTGCTCGAGCACTCGCCCCGCACGCCGCTGCTCTGCGCAATAGTCTCCCTGCTCCATGATTCAATCGGAGTGTCAGAGCCGGAGTACCCGCGCTACCAGGACCTCCTCCTCAAGTGCTTCTGGAAGACGTTGAAGATGATCTCCACTTGGGATGTCAATTCGATAGACTACGACGCCGTGCTGTACAAAATACATTTGTTCTATAAGGCTTATCCGAATAGCTTTTGGAAGAAGAATCCTGATATAAGCGATACGCCATACAGGACAGTGAAAACATTGGTACATACTCTAGTCAAAATGAAAGGCTCATCGATAGTGAACCATCTCACCCAGGTACCGGACGTCAACGAATCTGACCTCTACCCTTATTTACTTAAAGTTTTGAAGCAACTGAAACTGGACGAAAAGAAAGAAAACACTCCGGACGCGATCAACGGAGGCTCTGTCCTGGCGTCCGTCACGCCCAACGCCGCGCTCACCGCCGGCCGCCTGCCGCGCGCCGTGCACGAGGAGCTCGCCCTCATCCTCAAGCGCATCGGCAGCAAGGAGCACCACAAGGAGGCGCTCGTACAGCTCTACGACTTGAGGGAGCGACACCCGGACGTGGACATTTGGACTTTCATGCAAGGCTCGTCGTACTACTTCCGCAACTTCGTCGAGCGAGGCCTGCGCGAAGTGGCCGAGCAGAGGAAACTGGGCTCTATGCTCATGTACAAACACGACTACAAGGCTGACAACATTGACATAAGTAATGAACACGACGAGAAATCACATGTGATCTTCTTGGAAAGACTCAGAGCTTTGCAGGCGAAAGCTGGAATGAAAACAGAGTCCCCGTCACAAGCTCGCACGCCCATCGCCGACAACAGAGCGCTCGTCGACTCCATTAACGACAGCACGCTGCCCAAGCCGCACAGCATCGACCCGCAGCTGGAGCTTCACACCACACAACCGCTGTCACACAAGAACGAGGCGGCGGTCGACGCTCTGCGCCTGAAACTGCAACAAATCAAGAGCTCCTCCAAAAGATAG

Protein

MISADTIPQAEYEEEEEEEEQQPPPPVNVAPLEPRVITGPFGLDPDLIAQLDAAVPSVRRPELAQPDLKFLDDPVPVGGMRKPTVQPVRASIVPPSPGRPAPAPAAPPCAVDDAQLADTIHSISSPDLNAAMRALSLISGVVVSGRGAALGAHEQRLVAAVAAQLRRLRAAPPAPAHDALSAYKCLAGVLTNFYDTAGCGSQVGESALCCLLGELLRVLGAGGAAGAAGGADAERLVRILNNVCVRVLEHSPRTPLLCAIVSLLHDSIGVSEPEYPRYQDLLLKCFWKTLKMISTWDVNSIDYDAVLYKIHLFYKAYPNSFWKKNPDISDTPYRTVKTLVHTLVKMKGSSIVNHLTQVPDVNESDLYPYLLKVLKQLKLDEKKENTPDAINGGSVLASVTPNAALTAGRLPRAVHEELALILKRIGSKEHHKEALVQLYDLRERHPDVDIWTFMQGSSYYFRNFVERGLREVAEQRKLGSMLMYKHDYKADNIDISNEHDEKSHVIFLERLRALQAKAGMKTESPSQARTPIADNRALVDSINDSTLPKPHSIDPQLELHTTQPLSHKNEAAVDALRLKLQQIKSSSKR

Uniprot

A0A2A4J562   A0A3S2NK60   A0A212EPW6   A0A2H1V9Y1   A0A194PXY3   A0A0N0PC30   + More
A0A158NED1   A0A195BX28   A0A195FL51   A0A0J7L889   A0A026VZT0   A0A151J6L3   A0A151WVX7   A0A195CAH0   A0A3L8E1Z2   E2C892   E2B1J0   A0A1Y1K2G3   A0A1Y1JZC9   A0A1Y1K7B4   A0A1Y1K4W3   A0A1Y1JZU4   A0A0T6B5B1   A0A154PK94   A0A1B6DJ97   A0A1B6CWX2   A0A2J7R1U5   A0A2J7R1T6   A0A2J7R1V0   A0A2J7R1U0   A0A2J7R1U2   A0A232F9C1   A0A067QZY8   A0A0M8ZY39   A0A088A8Y4   A0A2A3E4Z3   K7IX50   A0A1B6C9W5   A0A1B6CVQ0   A0A1W4X2D8  

Pubmed

22118469    26354079    21347285    24508170    30249741    20798317    + More
28004739    28648823    24845553    20075255   

EMBL

NWSH01003318    PCG66570.1    RSAL01000016    RVE53041.1    AGBW02013389    OWR43501.1    + More
ODYU01001448    SOQ37660.1    KQ459585    KPI98192.1    KQ460696    KPJ12743.1    ADTU01013252    KQ976401    KYM92523.1    KQ981490    KYN41076.1    LBMM01000231    KMR03598.1    KK107522    EZA49313.1    KQ979851    KYN18848.1    KQ982696    KYQ51976.1    KQ978023    KYM97869.1    QOIP01000001    RLU26463.1    GL453586    EFN75833.1    GL444934    EFN60447.1    GEZM01096669    JAV54688.1    GEZM01096672    JAV54684.1    GEZM01096670    JAV54687.1    GEZM01096671    JAV54685.1    GEZM01096673    JAV54683.1    LJIG01009709    KRT82537.1    KQ434943    KZC12217.1    GEDC01014783    GEDC01011593    JAS22515.1    JAS25705.1    GEDC01019384    GEDC01013928    JAS17914.1    JAS23370.1    NEVH01008202    PNF34803.1    PNF34800.1    PNF34802.1    PNF34799.1    PNF34801.1    NNAY01000601    OXU27451.1    KK853147    KDR10714.1    KQ435827    KOX71953.1    KZ288379    PBC26564.1    AAZX01000600    AAZX01021298    GEDC01027020    GEDC01016294    JAS10278.1    JAS21004.1    GEDC01019893    GEDC01015728    JAS17405.1    JAS21570.1   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053268    UP000053240    UP000005205    + More
UP000078540    UP000078541    UP000036403    UP000053097    UP000078492    UP000075809    UP000078542    UP000279307    UP000008237    UP000000311    UP000076502    UP000235965    UP000215335    UP000027135    UP000053105    UP000005203    UP000242457    UP000002358    UP000192223   

Pfam

PF12348   CLASP_N        + More
PF11640   TAN

Interpro

IPR011989   ARM-like        + More
IPR034085   TOG       
IPR016024   ARM-type_fold       
IPR021133   HEAT_type_2       
IPR024395   CLASP_N_dom       
IPR021668   TAN       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10    

ProteinModelPortal

A0A2A4J562   A0A3S2NK60   A0A212EPW6   A0A2H1V9Y1   A0A194PXY3   A0A0N0PC30   + More
A0A158NED1   A0A195BX28   A0A195FL51   A0A0J7L889   A0A026VZT0   A0A151J6L3   A0A151WVX7   A0A195CAH0   A0A3L8E1Z2   E2C892   E2B1J0   A0A1Y1K2G3   A0A1Y1JZC9   A0A1Y1K7B4   A0A1Y1K4W3   A0A1Y1JZU4   A0A0T6B5B1   A0A154PK94   A0A1B6DJ97   A0A1B6CWX2   A0A2J7R1U5   A0A2J7R1T6   A0A2J7R1V0   A0A2J7R1U0   A0A2J7R1U2   A0A232F9C1   A0A067QZY8   A0A0M8ZY39   A0A088A8Y4   A0A2A3E4Z3   K7IX50   A0A1B6C9W5   A0A1B6CVQ0   A0A1W4X2D8  

KEGG

101744324    K16803 cytoskeleton-associated protein 5 | (RefSeq) cytoskeleton-associated protein 5-like

GO

GO:0004674  

Length:

589

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01409

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00164

outside

1  -  589

 

 

Pi

195.058528

Theta

159.685856

Tajima's D

1.482237

CLR

0.08904

CSRT

0.779061046947653

Interpretation

Uncertain