SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08290
Annotation
PREDICTED:_uncharacterized_protein_LOC106120634_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 2.39
 

Sequence

CDS
ATGAAAACAGGAGTAGCATACGGAATAGTCGCTAGTTCGAAAACACGTGTGAGATGTGTATTTTGTGGAGTACACATACCAAAAGCTACGAAATGTATCGAACAACACACAAATGGAGTAAAACACCGAGAGAACATAGAATTAATGAATGAAAACGCTATCGCCCTAATTAGTGATGCGTTATATTGTCGACCCTGTATGATTAACATCCCCGAGGACTATTCAATAACTAAACATATCGAGATGGAAGATCACGCAAACTGGATAGCTGCAATTGACGACCTTACTGACGGTGAGTTTATATCAATCGACTCTTATCTCTGTTCGGAGACCGACAACGTTCACTGCGAGGTCTGCAGCATGAATATCGTCTGCACGCTACAAAATATCCAAAATCATGTAAATGAGTTTAGTCACAGAGCGAACATTATGGAGAGACTCAAGCCACTTAATGCTGTATTCTGTTCTGATGACAATGAAGATGCATGGTGCAAACTATGCGACGTGTACATTGTAAACACTGTTCAGAGTATACTTGAACACATTGATGATGATGAAGAACATATACAGTTGCTGGCCAGGCTCGAAGATATTGCAGAGGTTCACAATTTAAATATTGACAGTTACTTAATGAATGAACATGAAAATAACGCTTTTTGCAATAAATGTAACATTGAAATAGTCTGTAATGTGGAAAATATTGAAGAACACATAAATTCTAATTCACATCTAAATAATATAATAGTTTATTAA
Protein
MKTGVAYGIVASSKTRVRCVFCGVHIPKATKCIEQHTNGVKHRENIELMNENAIALISDALYCRPCMINIPEDYSITKHIEMEDHANWIAAIDDLTDGEFISIDSYLCSETDNVHCEVCSMNIVCTLQNIQNHVNEFSHRANIMERLKPLNAVFCSDDNEDAWCKLCDVYIVNTVQSILEHIDDDEEHIQLLARLEDIAEVHNLNIDSYLMNEHENNAFCNKCNIEIVCNVENIEEHINSNSHLNNIIVY

Summary

Pfam
PF12756   zf-C2H2_2
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
SUPFAM
SSF57667   SSF57667       

Ontologies

Topology

Length:
250
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00273
Exp number, first 60 AAs:
0.00259
Total prob of N-in:
0.06333
outside
1  -  250
 
 

Population Genetic Test Statistics

Pi
303.520878
Theta
218.380141
Tajima's D
1.228702
CLR
0
CSRT
0.72136393180341
Interpretation
Uncertain
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