SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08287
Pre Gene Modal
BGIBMGA009532
Annotation
PREDICTED:_torso-like_protein_isoform_X1_[Bombyx_mori]
Full name
Torso-like protein      
Location in the cell
PlasmaMembrane   Reliability : 2.387
 

Sequence

CDS
ATGGTGCGGACCCTCACAGTTCTGCTGCTGGTGGTAGCTCTGTGCCGCGCTGCCACCCATGACTCAGAGCTTGGCGTCGGGAAGGCCATCAACATATTTATGAGATATGGCTACCTCAGCATATGCATGCGAGTTGTTCCCCGGAACGACACAGAGAACTGGGTTTTCCGGGAGCCGACAGTCAGCGTTTTCCGGGACGTGGAGCAATACAGCGTCGCGCCCAAACCTCGCCAGCCGAAGACACTGTTCGACGGAGACTTCCACATGGAGTTCTGCGATAACCTGAAGCAACTGCTGCAAGCGTATTTCAGGGATTTCACTTTTGAAAGGCTGGAGCGTCCATGGCGGGCGTTCACGGCTGGCTGGCCCACAGACATAATGGCCAGAAACTTGGGGATCAACTCCTCGTTCATCAATGGCGACCACTGCTACGTGCTCGTCAGAGTTTCCAGGTTCCGCGAAACGGGAAAACTAAAGGACTTGCCACAGAACATAGGAGTTGAGGATGTGGTGTTTGACGCCATCCAAGATTCAATCATTGGGGATACGGCATCCATTGCCGATTTCATACGCAAATACGGATCGCACTACATTGCATCCTATATTACTGGTAACTCTCTGTACCAGGTGTTTGTCTTCTCCCGGGGCGTGTACTCCAGGGTCAAAGACCGCGTCAAGTCTAACGGGGTCGGTGACCTATCTGTCACTGAGCTAAACAATTTCTTCTCGCCGTTCTTCGCTGAACACGTCGGAGTAGTCAAGGTCGCCAGCGGTAACAAAACAGTAGAGAGCTGGGCGACGAAACGTCTAAGGATGCATTACTATATCTTCTCATACCCGAGTCTCCTGAAACTCCACGGGGAACCGGCGTTACTACGCAACCTAGACACGTTATTAGGAAATGAAGCTCTATTGCAATTGGAATTAAAGACATTATCGCCCGCATTCAAAGACGCGAACAAAAGGAAGTGGTTCGAAGAGGTCATAGACAATTATTTAAAACTTTGGGAGAGTAATATGTGA
Protein
MVRTLTVLLLVVALCRAATHDSELGVGKAINIFMRYGYLSICMRVVPRNDTENWVFREPTVSVFRDVEQYSVAPKPRQPKTLFDGDFHMEFCDNLKQLLQAYFRDFTFERLERPWRAFTAGWPTDIMARNLGINSSFINGDHCYVLVRVSRFRETGKLKDLPQNIGVEDVVFDAIQDSIIGDTASIADFIRKYGSHYIASYITGNSLYQVFVFSRGVYSRVKDRVKSNGVGDLSVTELNNFFSPFFAEHVGVVKVASGNKTVESWATKRLRMHYYIFSYPSLLKLHGEPALLRNLDTLLGNEALLQLELKTLSPAFKDANKRKWFEEVIDNYLKLWESNM

Summary

Description
Probable ligand that binds to the torso receptor. Implicated in a receptor tyrosine kinase signaling pathway that specifies terminal cell fate.
Keywords
Complete proteome   Developmental protein   Glycoprotein   Reference proteome   Secreted   Signal  
Feature
chain  Torso-like protein
EMBL
BABH01023289    RSAL01000016    RVE53031.1    NWSH01002456    PCG68258.1    KQ459585    + More
KPI98180.1    KQ460627    KPJ13449.1    ODYU01002028    SOQ39025.1    ODYU01005267    SOQ45949.1    AGBW02009914    OWR49580.1    JTDY01003572    KOB69324.1    GEZM01039900    GEZM01039899    GEZM01039898    GEZM01039897    JAV81103.1    KQ981567    KYN39803.1    KZ288202    PBC33496.1    GL435242    EFN73623.1    KQ759874    OAD62375.1    KQ976692    KYM77687.1    ADTU01003356    GL888336    EGI62490.1    KQ979074    KYN23048.1    KQ977622    KYN01344.1    KQ982851    KYQ49831.1    GL446691    EFN87397.1    KK107159    EZA56646.1    AAZX01000213    QOIP01000001    RLU26710.1    KQ434886    KZC10114.1    KQ971338    EFA02884.1    NNAY01002367    OXU21452.1    LBMM01003459    KMQ93508.1    PYGN01000086    PSN54644.1    KQ414648    KOC66155.1    GFDF01010148    JAV03936.1    GFDF01005922    JAV08162.1    KQ435740    KOX76846.1    AJWK01004316    GFDF01009896    JAV04188.1    KK852567    KDR21228.1    BT128393    KB632308    AEE63351.1    ERL92003.1    UFQS01000555    UFQT01000555    SSX04891.1    SSX25254.1    NEVH01007823    PNF35228.1    GGMS01001193    MBY70396.1    APGK01023865    APGK01023866    APGK01023867    KB740522    ENN80499.1    JXUM01000913    JXUM01016155    JXUM01016156    JXUM01016157    KQ560450    KQ560113    KXJ82365.1    KXJ84426.1    CH477664    EAT37555.1    GGMR01010418    MBY23037.1    GGFM01005703    MBW26454.1    GFXV01000155    GFXV01006756    MBW11960.1    MBW18561.1    CVRI01000010    CRK89098.1    ADMH02000471    ETN66351.1    AXCN02001631    ATLV01021724    KE525322    KFB46841.1    ABLF02031261    ABLF02031262    GECZ01031627    JAS38142.1    APGK01015109    APGK01015110    KB739485    ENN82247.1    DS235023    EEB10670.1    GEBQ01026063    JAT13914.1    APCN01000232    AAAB01008799    EAA03773.4    CCAG010015430    JXJN01014062    CH940656    EDW58677.1    OUUW01000007    SPP82955.1    CM000070    EAL27284.2    KRS99906.1    KRS99907.1    KRS99908.1    CH479179    EDW23775.1    AXCM01000557    CH964272    EDW84647.1    GDHF01028297    JAI24017.1    GAKP01010799    JAC48153.1    CH902617    EDV42544.1    CP012526    ALC46154.1    CH933806    EDW15289.1    KRG01497.1    KRG01498.1    KRG01499.1    CH480815    EDW43093.1    CM000364    EDX13828.1    GBHO01008538    GBRD01016118    GDHC01016940    JAG35066.1    JAG49708.1    JAQ01689.1    AE014297    AAN13883.1    AGB96190.1    Z30342    X75614    AY071336    CH916369    EDV92656.1   
Pfam
PF01823   MACPF
Interpro
IPR020864   MACPF       

Ontologies

Topology

Subcellular location
Secreted  
SignalP
Position:   1 - 17,         Likelihood:  0.996617
 
 
Length:
340
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.66377
Exp number, first 60 AAs:
0.10833
Total prob of N-in:
0.01347
outside
1  -  340
 
 

Population Genetic Test Statistics

Pi
245.896669
Theta
206.540439
Tajima's D
1.791827
CLR
0.84092
CSRT
0.846357682115894
Interpretation
Uncertain
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