Gene

KWMTBOMO08280

Pre Gene Modal

BGIBMGA009528

Annotation

PREDICTED:_collagenase-like_[Papilio_polytes]

Location

Bomo_Chr14(+):4007385-4009910      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.931

CDS

ATGAAGGTGTTGCTATTGATTTTTTTGGGCGCGGTCTCGTTGGCGTCAGCGGGTCTTCTTCCAGCCATGCTGCCCTACCATGATACGGTTGGAATTCCTCTGGCAGAAAGTCTCAAGAAATCGGAGGAAGCCCGAGACTTTGATGGATCTAGAATTGTGAATGGAAATCTTGCTCGTTTGGGTGCTCACCCGTACATGGTCGGTTTAGTCATAGAAATACGGGGCAGTGCTAATTCAGTATGCGGTTCATCTATGCTCAGTAACACGAGGTCTCTCACAGCTGCTCACTGTTGGTTTGATGGAGTTAGACAAGCATTATCATTCACAATGGCCTTTGGAACAATCACTGTTTTTACTGGAGGTGTTAGAGTGCGCACCACAAACGTACGGATGCATGAAAATTGGGATCCAAGAAATTTAATCAACGACATAGCCGTAATCACCCACAATCGGGTGGGATATACCAATGCTATTCAGGCAATAACTTTACCATCTGGATCTCTTCTTAACAACAATTTCGTTGGAACCTCGGCACAGGTTTCCGGTTACGGAAGAACCGGTGACGGTTCTCAACACAACATCAGACCAGATCAAGCGAAGAGAGTGGCAACCGTCCGAGTTATTACCAACAATGAATGTAGAAATGTTTTTGGATCTATGGTCCGGGACACTATTATCTGTACAAGCGGAGCTGAAGGTCGTAATATCTGCGGCAGCGACTCTGGCGGACCTTTATCCATTGTCAACAATAATCGGAGAGTGTTGATTGGCGTTGTAATGTTTGGACATCATCGATGCGAGTCTCGTAACCCTGGCGGGTATTCTCGCGTCACTGCTTACAACAACTGGATCCGGGCTAGATTATAA

Protein

MKVLLLIFLGAVSLASAGLLPAMLPYHDTVGIPLAESLKKSEEARDFDGSRIVNGNLARLGAHPYMVGLVIEIRGSANSVCGSSMLSNTRSLTAAHCWFDGVRQALSFTMAFGTITVFTGGVRVRTTNVRMHENWDPRNLINDIAVITHNRVGYTNAIQAITLPSGSLLNNNFVGTSAQVSGYGRTGDGSQHNIRPDQAKRVATVRVITNNECRNVFGSMVRDTIICTSGAEGRNICGSDSGGPLSIVNNNRRVLIGVVMFGHHRCESRNPGGYSRVTAYNNWIRARL

Similarity

Belongs to the peptidase S1 family.

Uniprot

H9JJ27   H9JJ25   A0A2W1BAG4   A0A2H1WCW9   A0A194Q0R8   A0A0N1PGY7   + More
Q58I80   A0A089QFN1   A0A2A4JJ77   H9JY11   T1WJA5   C9W8H4   Q762I9   H9JY10   H9JY12   O01953   A0A0N0PAA7   Q58I79   A0A410KKC8   H9JY09   H9JCY0   A0A0N1PIX2   J7FCZ4   J7FDV3   A0A2A4JSJ6   A0A2A4JFK9   B2ZJV9   H9JY13   A0A194Q399   Q9NH10   A0A0N1IFV7   Q9NH07   A0A0N0PA14   A0A0X9HJY6   A0A1E1WV21   D2Y4U4   D7RZZ6   Q86M89   A0A194Q3W8   Q9NGY4   A0A0N0PAA9   A0A0N0PCX7   D7RZZ8   A0PGE0   A0A3S2LL18   A0A142I706   B6CMF0   A0A3S2NBJ8   D7RZZ7   A0PGD5   D7RZZ9   A0A2A4JFM8   A0A194R2V7   O18450   A0A1B0RHP3   B4X987   A0A2A4J7U7   O18445   O18444   O18443   A0A2H1V6V4   A0A437BEZ8   A0A2A4J8W1   B4X988   A0A0M3T9F4   A0A2A4K1C2   A0A2A4K1Q8   A0A2A4J8H7   A0A2A4J6X3   A0A2A4J6T8   B4X989   A0A2A4K0D3   O18438   A0A2H1V6R8   A0A0N1IAY5   A0A0M3T9L1   A0A212EYA6   E2D741   A0A2A4JGN4   A0A089QFP0   B6D1R1   A0A194QCZ1   A0A2A4K228   A0A2A4JGD4   Q9N6C6   A0PGD4   E7D003   B4X990   C9W8G8   A0PGD7   C9W8G3   A0A0N0PEU9   E7D007   E7D017   Q56IC0   C9W8H8   A0A2A4K1D3   A0A0X9H412   I6TRU6  

Pubmed

19121390    28756777    26354079    20824821    15033574    10380113    + More
22228503    11267902    19194984    20696895    18760362    9404008    22118469    20149796    19133073    16469064   

EMBL

BABH01023269    BABH01023267    KZ150191    PZC72392.1    ODYU01007826    SOQ50918.1    + More
KQ459581    KPI99177.1    KQ461033    KPJ09997.1    AY945210    EU338400    AAX39408.1    ABY58153.1    KM083780    AIR09761.1    NWSH01001385    PCG71452.1    BABH01041853    KF039687    AGU27161.1    FJ205420    ACR15987.3    AB117641    BAD13342.1    BABH01041852    BABH01041859    BABH01041860    BABH01042790    AB003670    BAA20136.1    KQ458725    KPJ05397.1    AY945211    DQ310733    AAX39409.1    ABC26003.1    MH201552    QAR48645.1    BABH01041868    BABH01027594    KQ460140    KPJ17496.1    JN252036    AFM28249.1    JN252035    AFM28248.1    NWSH01000651    PCG75015.1    NWSH01001552    PCG70875.1    EU672968    ACD44927.1    BABH01041861    KQ459586    KPI97880.1    AF233728    AAF71515.1    KPJ17495.1    AF233732    AAF71519.1    KQ458978    KPJ04519.1    KP690081    ODYU01000971    ALO61083.1    SOQ36527.1    GDQN01000181    JAT90873.1    GU323796    ADA83701.1    HM209419    ADI32880.1    AY251276    AAO75039.1    KQ459472    KPJ00237.1    AF237417    EF531621    AAF43709.1    ABR88232.1    KPJ05400.1    KQ460401    KPJ14971.1    HM209421    ADI32882.1    AY618895    AAV33658.1    RSAL01000073    RVE48982.1    KT907053    AMR44225.1    EU325550    ACB54940.1    RSAL01000119    RVE46735.1    HM209420    ADI32881.1    AY618890    AAV33653.1    HM209422    ADI32883.1    PCG70877.1    KQ460845    KPJ12032.1    Y12287    CAA72966.1    KM360186    AKH49602.1    EF531623    NWSH01000291    ABR88234.1    PCG77696.1    NWSH01002619    PCG67836.1    Y12281    CAA72960.1    Y12280    CAA72959.1    Y12279    CAA72958.1    SOQ36529.1    RVE48983.1    PCG67833.1    EF531624    ABR88235.1    KR024680    ALE15222.1    PCG77694.1    PCG77693.1    PCG67834.1    PCG67835.1    PCG67837.1    EF531625    ABR88236.1    PCG77697.1    Y12273    CAA72952.1    SOQ36528.1    KPJ05401.1    KR024674    ALE15216.1    AGBW02011570    OWR46476.1    GQ891130    ADK27715.1    PCG70878.1    KM083790    AIR09771.1    EU673454    ACI45417.1    KQ459185    KPJ03332.1    PCG77692.1    PCG70879.1    AF233731    AF233734    AAF71518.1    AAF71716.1    AY618889    AAV33652.1    HM990173    ADT80821.1    EF531626    ABR88237.1    FJ205413    ACR15981.1    AY618892    AAV33655.1    FJ205408    ACR15976.1    KQ459620    KPJ20544.1    HM990177    ADT80825.1    HM990187    ADT80835.1    AY953056    AY953057    AAX62029.1    AAX62030.1    FJ205424    ACR15991.1    PCG77704.1    KP690080    ALO61082.1    JQ904141    AFM77771.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000283053    UP000007151    + More

PRIDE

H9JJ27    H9JJ25    H9JY11    Q762I9    H9JY10    H9JY12    + More
O01953    Q58I79    H9JY09    H9JCY0    H9JY13   

Pfam

PF00089   Trypsin

Interpro

IPR001254   Trypsin_dom        + More
IPR018114   TRYPSIN_HIS       
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR033116   TRYPSIN_SER       

SUPFAM

SSF50494   SSF50494       

CDD

cd00190  Tryp_SPc

ProteinModelPortal

H9JJ27   H9JJ25   A0A2W1BAG4   A0A2H1WCW9   A0A194Q0R8   A0A0N1PGY7   + More
Q58I80   A0A089QFN1   A0A2A4JJ77   H9JY11   T1WJA5   C9W8H4   Q762I9   H9JY10   H9JY12   O01953   A0A0N0PAA7   Q58I79   A0A410KKC8   H9JY09   H9JCY0   A0A0N1PIX2   J7FCZ4   J7FDV3   A0A2A4JSJ6   A0A2A4JFK9   B2ZJV9   H9JY13   A0A194Q399   Q9NH10   A0A0N1IFV7   Q9NH07   A0A0N0PA14   A0A0X9HJY6   A0A1E1WV21   D2Y4U4   D7RZZ6   Q86M89   A0A194Q3W8   Q9NGY4   A0A0N0PAA9   A0A0N0PCX7   D7RZZ8   A0PGE0   A0A3S2LL18   A0A142I706   B6CMF0   A0A3S2NBJ8   D7RZZ7   A0PGD5   D7RZZ9   A0A2A4JFM8   A0A194R2V7   O18450   A0A1B0RHP3   B4X987   A0A2A4J7U7   O18445   O18444   O18443   A0A2H1V6V4   A0A437BEZ8   A0A2A4J8W1   B4X988   A0A0M3T9F4   A0A2A4K1C2   A0A2A4K1Q8   A0A2A4J8H7   A0A2A4J6X3   A0A2A4J6T8   B4X989   A0A2A4K0D3   O18438   A0A2H1V6R8   A0A0N1IAY5   A0A0M3T9L1   A0A212EYA6   E2D741   A0A2A4JGN4   A0A089QFP0   B6D1R1   A0A194QCZ1   A0A2A4K228   A0A2A4JGD4   Q9N6C6   A0PGD4   E7D003   B4X990   C9W8G8   A0PGD7   C9W8G3   A0A0N0PEU9   E7D007   E7D017   Q56IC0   C9W8H8   A0A2A4K1D3   A0A0X9H412   I6TRU6  

PDB

2HLC     E-value=5.5958e-27,     Score=299

KEGG

101737899    no KO assigned | (RefSeq) collagenase-like

GO

GO:0004252   GO:0008236   GO:0006508   GO:0046872   GO:0003917   GO:0016887   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

SignalP

Position:   1 - 17,         Likelihood:  0.982784

 

 

Length:

288

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

39.5800700000001

Exp number, first 60 AAs:

21.23762

Total prob of N-in:

0.97277

POSSIBLE N-term signal

sequence

inside

1  -  2

TMhelix

3  -  25

outside

26  -  101

TMhelix

102  -  124

inside

125  -  288

 

 

Pi

173.539056

Theta

171.979934

Tajima's D

0.808395

CLR

1.966629

CSRT

0.604519774011299

Interpretation

Uncertain