Gene

KWMTBOMO08279

Pre Gene Modal

BGIBMGA009528

Annotation

PREDICTED:_collagenase-like_[Papilio_machaon]

Location

Bomo_Chr14(+):3996415-4001725      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.929

CDS

ATGAAGGTGTTACTATTGATTTTTTTGGGCGCGGTCTCGTTGGCGTCAGCGGGTCTTCTTCCAGCCATGCTGCCCTACCATGATACGGTTGGAATCCCTCTGGCAGAAAGTCTCAAGAAATCGGAGGAAGCCCGAGACTTTGATGGATCTAGAATTGTGAATGGAAATCTTGCTCGTTTGGGTGCTCACCCGTACATGGTCGGTTTAGTCATAGAAATACGGGGCGGTGCTAATTCAGTATGCGGTTCATCTATGCTCAGTAACACGAGGTCTCTCACAGCTGCTCACTGCTGGTTTGATGGATTTAGACAAGCATTATCATTCACAATGGCCTTTGGAACAATCACTGTCTTTACTGGAGGTGTTAGAGTGCGCACCACAAACGTACGGATGCATGAAAATTGGAGACCAAGAGATGCAATCAACGACATAGCCGTAATCACCCACAATCGTGTGGGATATACCAATGTGATTCAGGCAATCGCTTTACCATCTGGATCTCTTCTTAACAACAATTTCGTTGGGACTTCGGCGCAAGTTTCCGGTTACGGAAGAACCGGTGACGGTTCTCAACACGACATCAGACCAAATCAAGCGATGAGAGTGGCAACCGTCCGAGTTATTACCAACACTGAATGTAGAAATGCTTTTGGAGCTGTGGTCCGGGACACTGTACTCTGTACAAGCGGATCTGAAGGTCGTAATATCTGCAGCAGCGACTCTGGCGGACCTTTATCCATTGTCAACAATAACAGGAGAGTGTTGATTGGCGTTGTAATGTTTGGACATCCTCGATGCGAGTCTCGTAACCCTGGCGGGTATTCTCGCGTCACCGCTTACAACAACTGGATCCGGGCTAGATTATAA

Protein

MKVLLLIFLGAVSLASAGLLPAMLPYHDTVGIPLAESLKKSEEARDFDGSRIVNGNLARLGAHPYMVGLVIEIRGGANSVCGSSMLSNTRSLTAAHCWFDGFRQALSFTMAFGTITVFTGGVRVRTTNVRMHENWRPRDAINDIAVITHNRVGYTNVIQAIALPSGSLLNNNFVGTSAQVSGYGRTGDGSQHDIRPNQAMRVATVRVITNTECRNAFGAVVRDTVLCTSGSEGRNICSSDSGGPLSIVNNNRRVLIGVVMFGHPRCESRNPGGYSRVTAYNNWIRARL

Similarity

Belongs to the peptidase S1 family.

Uniprot

H9JJ27   H9JJ25   A0A2W1BAG4   A0A0N1PGY7   A0A194Q0R8   A0A2A4JJ77   + More
A0A2H1WCW9   T1WJA5   C9W8H4   A0A089QFN1   Q58I80   H9JY11   A0A0N0PAA7   H9JY10   O01953   H9JY12   Q762I9   Q58I79   H9JY09   A0A410KKC8   J7FDV3   A0A2A4JSJ6   A0A0N1PIX2   J7FCZ4   A0A2A4JFK9   H9JCY0   A0A0N0PAA9   B2ZJV9   D7RZZ6   D2Y4U4   Q9NH10   D7RZZ8   A0PGE0   B6CMF0   A0A194Q399   D7RZZ7   Q86M89   D7RZZ9   A0A0N1IFV7   A0A194Q3W8   A0A0N0PA14   A0A0X9HJY6   H9JY13   A0A0N0PCX7   Q9NGY4   A0A194R2V7   A0A142I706   B4X987   A0A1E1WV21   Q9NH07   B4X988   A0A3S2NBJ8   A0PGD5   E2D741   A0A2A4K0D3   A0A2A4K1C2   A0A2A4K1Q8   O18450   A0A2A4JFM8   A0A2A4J8H7   O18445   O18444   A0A2A4J6X3   A0A2H1V6V4   B4X989   C9W8G8   A0A0N1IAY5   A0A3S2LL18   A0A1B0RHP3   A0A2H1V6R8   O18443   Q9N6C6   E7D017   A0A437BEZ8   B4X990   O18438   C9W8H8   E7D015   A0A2A4K228   A0A0N0PEU9   A0A194QCZ1   A0A2A4J8W1   A0PGD7   A0A2A4JGD4   A0A2A4JGN4   A0A0M3T9L1   C9W8F9   A0A2A4J6T8   A0A2A4J7U7   A0A089RSZ3   E7D003   A0PGD4   A0A0M3T9F4   A0A0X9H412   C9W8G0   A0A2A4K1D3   E7D007   B6D1R1   A0A212EYA6  

Pubmed

19121390    28756777    26354079    20824821    10380113    15033574    + More
22228503    11267902    20696895    18760362    19194984    20149796    9404008    19133073    22118469   

EMBL

BABH01023269    BABH01023267    KZ150191    PZC72392.1    KQ461033    KPJ09997.1    + More
KQ459581    KPI99177.1    NWSH01001385    PCG71452.1    ODYU01007826    SOQ50918.1    KF039687    AGU27161.1    FJ205420    ACR15987.3    KM083780    AIR09761.1    AY945210    EU338400    AAX39408.1    ABY58153.1    BABH01041853    KQ458725    KPJ05397.1    BABH01041852    BABH01042790    AB003670    BAA20136.1    BABH01041859    BABH01041860    AB117641    BAD13342.1    AY945211    DQ310733    AAX39409.1    ABC26003.1    BABH01041868    MH201552    QAR48645.1    JN252035    AFM28248.1    NWSH01000651    PCG75015.1    KQ460140    KPJ17496.1    JN252036    AFM28249.1    NWSH01001552    PCG70875.1    BABH01027594    KPJ05400.1    EU672968    ACD44927.1    HM209419    ADI32880.1    GU323796    ADA83701.1    AF233728    AAF71515.1    HM209421    ADI32882.1    AY618895    AAV33658.1    EU325550    ACB54940.1    KQ459586    KPI97880.1    HM209420    ADI32881.1    AY251276    AAO75039.1    HM209422    ADI32883.1    KPJ17495.1    KQ459472    KPJ00237.1    KQ458978    KPJ04519.1    KP690081    ODYU01000971    ALO61083.1    SOQ36527.1    BABH01041861    KQ460401    KPJ14971.1    AF237417    EF531621    AAF43709.1    ABR88232.1    KQ460845    KPJ12032.1    KT907053    AMR44225.1    EF531623    NWSH01000291    ABR88234.1    PCG77696.1    GDQN01000181    JAT90873.1    AF233732    AAF71519.1    EF531624    ABR88235.1    RSAL01000119    RVE46735.1    AY618890    AAV33653.1    GQ891130    ADK27715.1    PCG77697.1    PCG77694.1    PCG77693.1    Y12287    CAA72966.1    PCG70877.1    NWSH01002619    PCG67834.1    Y12281    CAA72960.1    Y12280    CAA72959.1    PCG67835.1    SOQ36529.1    EF531625    ABR88236.1    FJ205413    ACR15981.1    KPJ05401.1    RSAL01000073    RVE48982.1    KM360186    AKH49602.1    SOQ36528.1    Y12279    CAA72958.1    AF233731    AF233734    AAF71518.1    AAF71716.1    HM990187    ADT80835.1    RVE48983.1    EF531626    ABR88237.1    Y12273    CAA72952.1    FJ205424    ACR15991.1    HM990185    ADT80833.1    PCG77692.1    KQ459620    KPJ20544.1    KQ459185    KPJ03332.1    PCG67833.1    AY618892    AAV33655.1    PCG70879.1    PCG70878.1    KR024674    ALE15216.1    FJ205404    ACR15972.2    PCG67837.1    PCG67836.1    KM083791    AIR09772.1    SOQ36530.1    HM990173    ADT80821.1    AY618889    AAV33652.1    KR024680    ALE15222.1    KP690080    ALO61082.1    FJ205405    ACR15973.2    PCG77704.1    HM990177    ADT80825.1    EU673454    ACI45417.1    AGBW02011570    OWR46476.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000283053    UP000007151    + More

PRIDE

H9JJ27    H9JJ25    H9JY11    H9JY10    O01953    H9JY12    + More
Q762I9    Q58I79    H9JY09    H9JCY0    H9JY13   

Pfam

PF00089   Trypsin

Interpro

IPR001254   Trypsin_dom        + More
IPR018114   TRYPSIN_HIS       
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR033116   TRYPSIN_SER       

SUPFAM

SSF50494   SSF50494       

CDD

cd00190  Tryp_SPc

ProteinModelPortal

H9JJ27   H9JJ25   A0A2W1BAG4   A0A0N1PGY7   A0A194Q0R8   A0A2A4JJ77   + More
A0A2H1WCW9   T1WJA5   C9W8H4   A0A089QFN1   Q58I80   H9JY11   A0A0N0PAA7   H9JY10   O01953   H9JY12   Q762I9   Q58I79   H9JY09   A0A410KKC8   J7FDV3   A0A2A4JSJ6   A0A0N1PIX2   J7FCZ4   A0A2A4JFK9   H9JCY0   A0A0N0PAA9   B2ZJV9   D7RZZ6   D2Y4U4   Q9NH10   D7RZZ8   A0PGE0   B6CMF0   A0A194Q399   D7RZZ7   Q86M89   D7RZZ9   A0A0N1IFV7   A0A194Q3W8   A0A0N0PA14   A0A0X9HJY6   H9JY13   A0A0N0PCX7   Q9NGY4   A0A194R2V7   A0A142I706   B4X987   A0A1E1WV21   Q9NH07   B4X988   A0A3S2NBJ8   A0PGD5   E2D741   A0A2A4K0D3   A0A2A4K1C2   A0A2A4K1Q8   O18450   A0A2A4JFM8   A0A2A4J8H7   O18445   O18444   A0A2A4J6X3   A0A2H1V6V4   B4X989   C9W8G8   A0A0N1IAY5   A0A3S2LL18   A0A1B0RHP3   A0A2H1V6R8   O18443   Q9N6C6   E7D017   A0A437BEZ8   B4X990   O18438   C9W8H8   E7D015   A0A2A4K228   A0A0N0PEU9   A0A194QCZ1   A0A2A4J8W1   A0PGD7   A0A2A4JGD4   A0A2A4JGN4   A0A0M3T9L1   C9W8F9   A0A2A4J6T8   A0A2A4J7U7   A0A089RSZ3   E7D003   A0PGD4   A0A0M3T9F4   A0A0X9H412   C9W8G0   A0A2A4K1D3   E7D007   B6D1R1   A0A212EYA6  

PDB

2HLC     E-value=5.68997e-27,     Score=299

KEGG

101738031    no KO assigned | (RefSeq) collagenase-like

GO

GO:0004252   GO:0008236   GO:0006508   GO:0046872   GO:0003917   GO:0016887   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

SignalP

Position:   1 - 17,         Likelihood:  0.982784

 

 

Length:

288

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

40.96313

Exp number, first 60 AAs:

21.36607

Total prob of N-in:

0.97902

POSSIBLE N-term signal

sequence

inside

1  -  2

TMhelix

3  -  25

outside

26  -  101

TMhelix

102  -  124

inside

125  -  288

 

 

Pi

33.331319

Theta

40.336435

Tajima's D

-0.598753

CLR

393.045132

CSRT

0.219689015549223

Interpretation

Uncertain