Gene

KWMTBOMO08274

Annotation

PREDICTED:_uncharacterized_protein_LOC101744750_[Bombyx_mori]

Location

Bomo_Chr14(+):3658215-3659728      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.45

CDS

ATGGTTAAAGATTGGAAGGTCAGAGGACTACTCCCCCTGGACCTCAGAATACATGAGGCAGCAGCCCTGTATGAGGCAAAGAGGGGAGTGAGCCAGCTGGCGACAGGAGACGGGGAGATGGAGCGCATGACCAAATTCGCAGATATTCCCCACCCAGCAAAACACATAGATCTGCAGTTCATATGCTTGGAGGACCGTGAACAGGTAGACACCCATAGTACGCAAACAGTACGCATATACACCGATGGCAGCAAAATTGATGGCAAGGTCGGGGCCTCATTGTCTTTCTGGAGCAATGAGGTCGAGACCAAGTGCAAGAAATTGAAGCTGTCGTCGTACTGTACGGTCTTCCAGGCGGAACTGTTAGCTATATGTAGGAGCACTAGGGAGATCATAAAGCACCCAAAAGACAGCTTCGGAATCTACAGTGACTCAAGGTCGTCACTAGAAGCCGTTACAAATAATCGCTCTCTCCATCCCTTAGTGGTCGAAATCCGTCGTAATCTAGAAGAGTGCAAGCGCAGGAATAAACGCGTTGAACTCTTCTGGATTAAAGCTCACGCGGGCCTAGAGGGGAATGAGAGAGCTGACCAGCTCGCAAAAGAGGCCGCTCTGAAGCTGAAGACCAAGCCAGATTATGACCTGTGCCCTGTCTCATGCGTCAGGCGACAGATCCGTTTGGGGTCGCTTGAGGTATGGAACAAAAGGTACAGTGATGGTGAAACCGCAGCAACTACCAAGCTTTTCTTCCCAGACGCCATAAAGGCCTGCAGCATAGTCCGGCACGTAAAGCCAAACGGAGGACCCATCGTGTATCTGCGAGCCGGAAAAACCGGAAACTGTAGAGCACATAATAATAGAATATCCTGTCTTTGGTAG

Protein

MVKDWKVRGLLPLDLRIHEAAALYEAKRGVSQLATGDGEMERMTKFADIPHPAKHIDLQFICLEDREQVDTHSTQTVRIYTDGSKIDGKVGASLSFWSNEVETKCKKLKLSSYCTVFQAELLAICRSTREIIKHPKDSFGIYSDSRSSLEAVTNNRSLHPLVVEIRRNLEECKRRNKRVELFWIKAHAGLEGNERADQLAKEAALKLKTKPDYDLCPVSCVRRQIRLGSLEVWNKRYSDGETAATTKLFFPDAIKACSIVRHVKPNGGPIVYLRAGKTGNCRAHNNRISCLW

Uniprot

A0A2W1BN41   Q9BLI5   Q93139   Q3V5Y4   A0A2A4JF48   A0A0L7L848   + More
A0A437ART2   A0A0L7L1P2   A0A1Y3BBS5   A0A0L7LMC5   A0A0K1IK29   A0A437B2S6   A0A3S2NBZ7   A0A3S3P0A9   A0A2P8XKK4   A0A437BMS3   A0A0K1IK14   A0A224X5M4   A0A437BMI0   A0A087UHT1   A0A2L2YM05   A0A087TJZ1   A0A1W4XBW8   A0A1W7R9Y4   A0A087TAD8   A0A087T9L0   A0A087USZ4   A0A087TI44   A0A087UGW1   U5EV73   U5EW32   U5ERR6   U5EV16   U5EFQ1   A0A023EX80   V9H1I9   A6RGE6  

Pubmed

28756777    11319268    7623845    15247245    26227816    29403074    + More
26561354    25474469    1665124    19717792   

EMBL

KZ149985    PZC75691.1    AB046668    BAB21511.1    D38414    BAA07467.1    + More
AB211537    BAE44464.1    NWSH01001820    PCG70022.1    JTDY01002407    KOB71471.1    RSAL01001990    RVE40611.1    JTDY01003675    KOB69169.1    MUJZ01028333    OTF78340.1    JTDY01000583    KOB76580.1    KP771711    AKU04648.1    RSAL01000192    RVE44624.1    RSAL01000249    RVE43511.1    NCKU01007943    RWS02258.1    PYGN01001848    PSN32539.1    RSAL01000031    RVE51585.1    KP771712    AKU04650.1    GFTR01008639    JAW07787.1    RSAL01000030    RVE51677.1    KK119855    KFM76920.1    IAAA01038678    LAA08500.1    KK115566    KFM65430.1    GFAH01000444    JAV47945.1    KK114278    KFM62077.1    KK114163    KFM61799.1    KK121445    KFM80483.1    KK115320    KFM64783.1    KK119736    KFM76600.1    GANO01003537    JAB56334.1    GANO01003141    JAB56730.1    GANO01003612    JAB56259.1    GANO01003611    JAB56260.1    GANO01003746    JAB56125.1    GBBI01004920    JAC13792.1    X59239    CAA41925.1    CH476666    EDN05058.1   

Proteomes

UP000218220    UP000037510    UP000283053    UP000285301    UP000245037    UP000054359    + More
UP000192223    UP000009297   

PRIDE

Q9BLI5    Q93139    Q3V5Y4   

Pfam

PF00075   RNase_H        + More
PF14529   Exo_endo_phos_2
PF00078   RVT_1
PF02037   SAP
PF00270   DEAD
PF12520   DUF3723

Interpro

IPR036397   RNaseH_sf        + More
IPR002156   RNaseH_domain       
IPR012337   RNaseH-like_sf       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR036361   SAP_dom_sf       
IPR003034   SAP_dom       
IPR027417   P-loop_NTPase       
IPR014001   Helicase_ATP-bd       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR022198   DUF3723       

SUPFAM

SSF53098   SSF53098        + More
SSF56219   SSF56219       
SSF68906   SSF68906       
SSF52540   SSF52540       

Gene 3D

3.30.420.10     3.60.10.10     1.10.720.30    

ProteinModelPortal

A0A2W1BN41   Q9BLI5   Q93139   Q3V5Y4   A0A2A4JF48   A0A0L7L848   + More
A0A437ART2   A0A0L7L1P2   A0A1Y3BBS5   A0A0L7LMC5   A0A0K1IK29   A0A437B2S6   A0A3S2NBZ7   A0A3S3P0A9   A0A2P8XKK4   A0A437BMS3   A0A0K1IK14   A0A224X5M4   A0A437BMI0   A0A087UHT1   A0A2L2YM05   A0A087TJZ1   A0A1W4XBW8   A0A1W7R9Y4   A0A087TAD8   A0A087T9L0   A0A087USZ4   A0A087TI44   A0A087UGW1   U5EV73   U5EW32   U5ERR6   U5EV16   U5EFQ1   A0A023EX80   V9H1I9   A6RGE6  

KEGG

101744750    no KO assigned | (RefSeq) uncharacterized LOC101744750

GO

GO:0003676   GO:0004523   GO:0016021   GO:0046872   GO:0003917   GO:0016887   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

Length:

292

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0011

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.05875

outside

1  -  292

 

 

Pi

133.319512

Theta

66.776749

Tajima's D

1.448202

CLR

0.186045

CSRT

0.781460926953652

Interpretation

Uncertain