Gene
KWMTBOMO08272
Pre Gene Modal
BGIBMGA009439
Annotation
PREDICTED:_transcription_factor_SOX-6_[Papilio_machaon]
Transcription factor
Location in the cell
Nuclear Reliability : 4.786
Sequence
CDS
ATGGATGAACTAGCTCACAGTCCACCTGGTGTTAAGTGGTTACTGGAGACCATAGACAGCTACGACAGCATAGGCAACATGTCGGCGGAGTTAGAGCTGCAGAGGCTACAGCAGGAACAGCTGCGAAGACAGGAGCTGGTCCGTCGTGGACAGCACGGTCTCTATCCTGGACCGCCGCTGGCGTTGCTGCCTCTGTTGGAGCAGATGAGGCCGCAGCAACCTCAACCACCGAACATGCAATCGGCTCCGTGGCCAGCCACAGCCCAGCTGGCGCAGCTCTCCGCCAGCGCCCGATCCCCACCGCCCCAAGACCCTGATGCGCCACTAAACCTCAGCAAGCAGCGTTCCCCGTCTCCCCAGCAACCCATGATGCTGTCGAGATTCGTGCCCTACCCACCAATGGAAGAGAAGTCTCCGTATATGCAGAAAGACGACGACTACAACAACGCTTGCAACACTTCCTCGTGGTCTCAGTCTCCAGCCGAAGATGTAGAGAAGGCAAAATTGGTACGTCAGCCTCGCCGCGACGAGACCGGAAAACCGCACATAAAAAGACCCATGAACGCGTTCATGGTTTGGGCAAAGGACGAACGCAGGAAGATCCTCAAAGCGTGCCCCGATATGCACAATTCCAACATATCCAAGATCCTAGGAGCCAGATGGAAGGCCATGTCGAACGCTGAGAAGCAGCCTTATTACGAAGAACAGTCAAGACTATCGAAACTTCACATGGAAAAACATCCCGATTACAGATATCGACCAAGACCGAAAAGAACGTGCATTGTTGACGGGAAGAAGATGCGAATATCCGAATACAAGAATCTGATGCGGACGCGCCGACAGGAGATGCGGCAGTTGTGGTGTCGCGACGGGGGCAGCGAGCTGGGCTTCCTGCCGGGGCTCTCGTCTCCGGGCCCCTCGAACAGTTCCCCTCCCCCGAACGGGGGCAGCTACATGAACCAGTCGTTCTCCCCCCCGCTGTCCCCCGGCGAGGAGGATTGA
Protein
MDELAHSPPGVKWLLETIDSYDSIGNMSAELELQRLQQEQLRRQELVRRGQHGLYPGPPLALLPLLEQMRPQQPQPPNMQSAPWPATAQLAQLSASARSPPPQDPDAPLNLSKQRSPSPQQPMMLSRFVPYPPMEEKSPYMQKDDDYNNACNTSSWSQSPAEDVEKAKLVRQPRRDETGKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKNLMRTRRQEMRQLWCRDGGSELGFLPGLSSPGPSNSSPPPNGGSYMNQSFSPPLSPGEED
Summary
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
Pfam
PF00505 HMG_box
SUPFAM
SSF47095
SSF47095
Gene 3D
ProteinModelPortal
PDB
1I11
E-value=7.2942e-30,
Score=325
Ontologies
Topology
Length:
333
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00019
Exp number, first 60 AAs:
0.0001
Total prob of N-in:
0.00277
outside
1 - 333
Population Genetic Test Statistics
Pi
168.448104
Theta
140.159287
Tajima's D
0.708071
CLR
0.886653
CSRT
0.570171491425429
Interpretation
Uncertain
