Gene

KWMTBOMO08270

Pre Gene Modal

BGIBMGA009440

Annotation

PREDICTED:_von_Willebrand_factor_A_domain-containing_protein_7_[Gekko_japonicus]

Location

Bomo_Chr14(-):3157537-3159274      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.432 Nuclear   Reliability : 1.147

CDS

ATGCGTTTAATTCATTTCATATTACTCCTGTACTGTTTCGGAAATATACGAACGAAGAATGAGAGCGGCCGGAGTCTCACTTTTGTTATAGATCGCTCGTATTCACTGCAACTTCTAATAAAACAGTTCAAGGAAGCGTCATTGAATCTCACCAGTAAATTGATGGGACGTAAATCAAGTGATATCGTTAACGTAACACTTATTGTGTTCGATGATCCAACATACAAGCTTGTAGTGGACACCACGGACATTAGCGAGTTCGAGAAAAACTTAAAATCACTGGAAACTTACTACGACATTAAAAACAAAGATTGCCCTGAGATGAGTCTGTCTGCTCTCAAAATGGCTTTGACTAGGAGCTTGCCGAGATCATATATACTTCTATTCACCGACGCTACAGCAAAAGATGTATGGCTTTTGGACGAAGTTAAAATACTATCTAAGGAAAAGCAGAGCAAGGTAAGATCTATGTTGTAA

Protein

MRLIHFILLLYCFGNIRTKNESGRSLTFVIDRSYSLQLLIKQFKEASLNLTSKLMGRKSSDIVNVTLIVFDDPTYKLVVDTTDISEFEKNLKSLETYYDIKNKDCPEMSLSALKMALTRSLPRSYILLFTDATAKDVWLLDEVKILSKEKQSKVRSML

Uniprot

T1EJA1   G1KX23   T1EJ97   A0A044SXW9   A0A1S0UMB4   A0A1Y3E5W1   + More
C3Z8Z3   A0A401SJ60   A0A158Q9J1   A0A3P7DZB1   A0A0V1DJB6   A0A0V1HBV0   A0A0V1HBR0   A0A0V1DI29   A0A0V1DI53   A0A183V948   A0A0V1FI13   A0A0V1FI33   A0A0V0WXG9   A0A0V0VTL5   A0A0V1KWX8   A0A0V1NX02   A0A0V0S0I9   A0A0V1BJK0   A0A0V1A256   A0A0V1DYW1   A0A0V1IE20   A0A0V1DY64   A0A0V0S0N1   A0A0V0S0T3   A0A0V1NWG3   A0A0V1BJH5   A0A0V1NWI7   A0A0V1BJ77   A0A0V1BK67   A0A0V0WXD9   A0A0V0VTJ3   A0A0V1KVV1   A0A0V0U7T3   A0A0V1A1V7   A0A0V0WXR1   A0A0V1MLA8   A0A0V0VU77   A0A0V1KVS9   A0A0V0U8D7   A0A0V1A1Z7   A0A0V0WXR7   A0A0V0U9F2   A0A0V1MLS9   A0A183ISW3   A0A0N1I874   C4A0G4   A0A158R5T7   A0A0R3QT82   A0A087U6Q6   H3ADQ7   A0A0N5CMP2   A0A0R3RPN4   A0A158Q3H3   A0A3B3X3L6   A0A0B8RXN5   A0A444TI42   A0A0K0JA35   A0A146WR83   A0A146WQT6   A0A1S3KCR7   A0A1S3IRE7   A0A3Q2Q6M6   A0A3B3UCJ0   A0A3S2PS86   A0A2I4B4G3   A0A2I4B4D6   E7EY71   A0A1U8DJP2   A0A0S7HR98   A0A3Q0CSE1   A0A3P6TKL1   A0A3P9P691   A0A3P9AE33   A0A1S3PI68   A0A1S3PI86   A0A3Q4GUD4   E7F3V2   M3ZDA5   K1R2P7   A0A1I8F0W4   A0A0N4TJ88   A0A3Q3C3Q9   A0A3P9BQE6   A0A3B4GRR4   A0A3P8PUT5   I3JXY4   A0A067QUP4   A0A3P8SNR4   A0A2U9BRP6   A0A1E1WM33   A0A060VWR8   A0A3B5MHR2   A0A3B4XL25  

Pubmed

23254933    18563158    30297745    26354079    9215903    25476704    + More
17885136    26383154    23594743    25069045    25186727    23542700    22992520    26850696    24845553    24755649   

EMBL

AMQM01007465    KB097620    ESN93353.1    ESN93355.1    CMVM020000118    JH712067    + More
EJD76713.1    LVZM01023376    OUC40030.1    GG666598    EEN50905.1    BEZZ01000303    GCC30457.1    UXUI01007290    VDD86792.1    UYWW01001006    VDM09757.1    JYDI01000002    KRY61123.1    JYDP01000098    KRZ07695.1    KRZ07696.1    KRY61125.1    KRY61124.1    UYWY01024289    VDM48587.1    JYDT01000085    KRY85688.1    KRY85687.1    JYDK01000041    KRX80459.1    JYDN01000009    KRX66814.1    JYDW01000225    KRZ51458.1    JYDM01000086    KRZ88323.1    JYDL01000051    KRX20240.1    JYDH01000036    KRY37114.1    JYDQ01000041    KRY18897.1    JYDR01000166    JYDS01000219    JYDV01000017    KRY66518.1    KRZ21053.1    KRZ42041.1    KRY66520.1    KRZ21051.1    KRZ42039.1    KRY66519.1    KRZ21050.1    KRZ42040.1    KRX20241.1    KRX20239.1    KRZ88324.1    KRY37111.1    KRZ88322.1    KRY37113.1    KRY37112.1    KRX80458.1    KRX66815.1    KRZ51460.1    JYDJ01000043    KRX47396.1    KRY18896.1    KRX80457.1    JYDO01000076    KRZ72617.1    KRX66813.1    KRZ51459.1    KRX47397.1    KRY18895.1    KRX80456.1    KRX47395.1    KRZ72618.1    UZAM01009981    VDP10636.1    KQ460426    KPJ14779.1    GG666804    EEN41706.1    UZAG01016692    VDO30100.1    KK118472    KFM73045.1    AFYH01199621    AFYH01199622    AFYH01199623    AFYH01199624    AFYH01199625    AFYH01199626    AFYH01199627    AFYH01199628    AFYH01199629    AFYH01199630    UYYF01000183    VDM96861.1    UYYG01001157    VDN56791.1    GBSH01001123    JAG67902.1    SAUD01002510    RXG69659.1    GCES01054796    JAR31527.1    GCES01054797    JAR31526.1    CM012445    RVE68435.1    BX548021    GBYX01437714    JAO43638.1    UYRX01000551    VDK83743.1    CR391979    CR457445    JH819016    EKC40013.1    UZAD01013133    VDN89500.1    AERX01013686    KK852989    KDR12788.1    CP026251    AWP06721.1    GDQN01003046    JAT88008.1    FR904268    CDQ56760.1   

Proteomes

UP000015101    UP000001646    UP000024404    UP000243006    UP000001554    UP000287033    + More
UP000038041    UP000274131    UP000270924    UP000054653    UP000055024    UP000050794    UP000267007    UP000054995    UP000054673    UP000054681    UP000054721    UP000054924    UP000054630    UP000054776    UP000054783    UP000054632    UP000054805    UP000054826    UP000055048    UP000054843    UP000050793    UP000053240    UP000046393    UP000050602    UP000054359    UP000008672    UP000046394    UP000276776    UP000050640    UP000038040    UP000274756    UP000261480    UP000288706    UP000006672    UP000085678    UP000265000    UP000261500    UP000192220    UP000000437    UP000189705    UP000189706    UP000277928    UP000242638    UP000265140    UP000087266    UP000261580    UP000002852    UP000005408    UP000093561    UP000038020    UP000278627    UP000264840    UP000265160    UP000261460    UP000265100    UP000005207    UP000027135    UP000265080    UP000246464    UP000193380    UP000261380    UP000261360   

Pfam

PF13895   Ig_2        + More
PF07679   I-set
PF12662   cEGF
PF07645   EGF_CA
PF00047   ig
PF00092   VWA
PF13519   VWA_2
PF01223   Endonuclease_NS
PF07474   G2F
PF00090   TSP_1
PF13202   EF-hand_5
PF13499   EF-hand_7

Interpro

IPR036465   vWFA_dom_sf        + More
IPR013098   Ig_I-set       
IPR001881   EGF-like_Ca-bd_dom       
IPR026823   cEGF       
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR003599   Ig_sub       
IPR036179   Ig-like_dom_sf       
IPR000742   EGF-like_dom       
IPR018097   EGF_Ca-bd_CS       
IPR013032   EGF-like_CS       
IPR003598   Ig_sub2       
IPR013106   Ig_V-set       
IPR000152   EGF-type_Asp/Asn_hydroxyl_site       
IPR013151   Immunoglobulin       
IPR002035   VWF_A       
IPR001604   DNA/RNA_non-sp_Endonuclease       
IPR000884   TSP1_rpt       
IPR009017   GFP       
IPR036383   TSP1_rpt_sf       
IPR006605   G2_nidogen/fibulin_G2F       
IPR032984   Hemicentin-2       
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR018247   EF_Hand_1_Ca_BS       

SUPFAM

SSF53300   SSF53300        + More
SSF48726   SSF48726       
SSF57184   SSF57184       
SSF54511   SSF54511       
SSF82895   SSF82895       
SSF47473   SSF47473       

Gene 3D

3.40.50.410     2.60.40.10     2.20.100.10    

CDD

cd00051  EFh

ProteinModelPortal

T1EJA1   G1KX23   T1EJ97   A0A044SXW9   A0A1S0UMB4   A0A1Y3E5W1   + More
C3Z8Z3   A0A401SJ60   A0A158Q9J1   A0A3P7DZB1   A0A0V1DJB6   A0A0V1HBV0   A0A0V1HBR0   A0A0V1DI29   A0A0V1DI53   A0A183V948   A0A0V1FI13   A0A0V1FI33   A0A0V0WXG9   A0A0V0VTL5   A0A0V1KWX8   A0A0V1NX02   A0A0V0S0I9   A0A0V1BJK0   A0A0V1A256   A0A0V1DYW1   A0A0V1IE20   A0A0V1DY64   A0A0V0S0N1   A0A0V0S0T3   A0A0V1NWG3   A0A0V1BJH5   A0A0V1NWI7   A0A0V1BJ77   A0A0V1BK67   A0A0V0WXD9   A0A0V0VTJ3   A0A0V1KVV1   A0A0V0U7T3   A0A0V1A1V7   A0A0V0WXR1   A0A0V1MLA8   A0A0V0VU77   A0A0V1KVS9   A0A0V0U8D7   A0A0V1A1Z7   A0A0V0WXR7   A0A0V0U9F2   A0A0V1MLS9   A0A183ISW3   A0A0N1I874   C4A0G4   A0A158R5T7   A0A0R3QT82   A0A087U6Q6   H3ADQ7   A0A0N5CMP2   A0A0R3RPN4   A0A158Q3H3   A0A3B3X3L6   A0A0B8RXN5   A0A444TI42   A0A0K0JA35   A0A146WR83   A0A146WQT6   A0A1S3KCR7   A0A1S3IRE7   A0A3Q2Q6M6   A0A3B3UCJ0   A0A3S2PS86   A0A2I4B4G3   A0A2I4B4D6   E7EY71   A0A1U8DJP2   A0A0S7HR98   A0A3Q0CSE1   A0A3P6TKL1   A0A3P9P691   A0A3P9AE33   A0A1S3PI68   A0A1S3PI86   A0A3Q4GUD4   E7F3V2   M3ZDA5   K1R2P7   A0A1I8F0W4   A0A0N4TJ88   A0A3Q3C3Q9   A0A3P9BQE6   A0A3B4GRR4   A0A3P8PUT5   I3JXY4   A0A067QUP4   A0A3P8SNR4   A0A2U9BRP6   A0A1E1WM33   A0A060VWR8   A0A3B5MHR2   A0A3B4XL25  

KEGG

101742719    K17341 hemicentin | (RefSeq) hemicentin-2-like

GO

GO:0005509   GO:0003676   GO:0016787   GO:0046872   GO:0035122   GO:0090497   GO:0043589   GO:0030198   GO:0008307   GO:0006936   GO:0031430   GO:0055008   GO:0030241   GO:0030018   GO:0030017   GO:0055003   GO:0005865   GO:0048739   GO:0045214   GO:0051015   GO:0071688   GO:0030240   GO:0051371  

PANTHER

PTHR45889:SF4  

SignalP

Position:   1 - 18,         Likelihood:  0.681960

 

 

Length:

158

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00483

Exp number, first 60 AAs:

0.00244

Total prob of N-in:

0.01995

outside

1  -  158

 

 

Pi

162.653183

Theta

147.907115

Tajima's D

0.313382

CLR

0

CSRT

0.463226838658067

Interpretation

Uncertain