Gene

KWMTBOMO08267

Annotation

PREDICTED:_hemicentin-2-like_[Bombyx_mori]

Location

Bomo_Chr14(-):3127796-3141454      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.545

CDS

ATGCTTACTGAACTGAAGTTCTTTCATGATTTCCAGAAATACCCAGATTTTGTGTACAGAAGTATATTGACTGTGGAATCTGTGAAGAAATCCGAGAAATACGTATGCAGAGCGAGTAATAAGGTTGGACAGATAAGCGTAGAGGTGAACGTGACTGTGTTAGGAGACAGACCAAAGTTCAGACAATCTCTGAGCACAACTGCTGTGATGGAAGGCACAGAAGCTGTAATCCGATGCAAGATAGCTGAAGGCAAACCTAAACCAACCATAAAATGGATAGTTAATTCGAAGAGCCCAAACACAAACAAAGAGCTCTCATCGCATATTGGGGAAGAATTAATTCTCAGAAACATAACATTATCTCAAGCGGGTCACTACATTTGCGTTGCCGAGAATACATTCGGTCGGGCTCAACAAGATACGGATCTTATCGTGCAAGCTCCTCCGAAGATCCTCCGCAGAGAAGACGTACCTAAAGGTATCGTGGGAGACGTCGCTCTGAGTGTTCCTTGCACTGTCTCTGGATATCCGGTGCCGACGGTGGTCTGGAAAGCCAATGATACAGTCACACTCCACTCAGGCAGCAAGTATAACATCACCAAAGGAAACACATTGATCATTAACAATCTTGAACACGTCGATGCCTATACAAAGTACACTTGCGTTGCGAAAAATACTTTTGGCGAAGTTAATGAAACCTTTGATGATATTATATACGAGAGACCAAAGTTCAGAAAACTTGTGATCGCAACATCTGTGATGGAAGGCAGAGATGCTGTGATCCCGTGCAAGATAGCTGAAGGCAAACCTAAACCAACCATAAAATGGATAGTTAATTCGAAGAGCCCAAACACAAACAAAGAGCTCTCATCGCATATTGGAGAAGAATTAATTCTCAGAAACATTACGTTATCTCAAGCGGGTCACTACATTTGCGTTGCCGAGAATACATTCGGTCGGGCTCAACAAGATACGGATCTTATCGTGCAAGCTCCTCCGAAGATCCTCCGCAGAGAAGACGTACCTAAAGGTATCGTGGGAGACGTCGCTCTGAGTGTTCCTTGCACTGTCTACGGATATCCGGTGCCGACGGTGGTCTGGAAAGCCAATGACACAGTCACACTTCACTCAGGCAGCAAGTATAACATCACCAAAGGAAACACATTGATCATTAACAATCTTGAACACGCCGATGCCTATACAAAGTACACTTGCGTTGCGAAAAATACTTTTGGCGAAGTTAATCAAACCTTTGATGATATTATATACGAGAGACCAAAGTTCAGAAAACCTGTGATCACAACATCTGTGATGGAAGGCAGAGATGCTGTGATCCCGTGCAAGGTAGCTGAAGGCAAACCTAAACCAACCATAAAATGGATAGTTAATTCGAAGAGCCCAAACACAAACAAAGAGCTCTCATCGCATATTGGAGAAGAATTAATTCTCAGAAACATTACATTATCTCAAGCGGGTCACTACATTTGCGTTGCCGAGAATACATTCGGTCGGGCTCAACAAGATACGGATCTTATCGTGCAAGCTCCTCCGAAGATCCTCCGCAGAGGAGACGTACCTAAAGGCATCGTGGGAGATGTCGCTCTGAGTGTTCCTTGCACTGTCTCCGGATATCCGGTGCCGACGGTGGTCTGGAAAGCCAATGACACAGTCACACTCCACTCAGGCAGCAAGTATAACATCACCAAAGGAAACACATTGATCATTAACAATCTTGAACACGCCGATGCCTATACAAAGTACACTTGTGTTGCGAAAAACACGTTTGGTGAAGTTAATCAAACCTTTAGTCATATTATTACTGAAGGACTCGTTGACTTTGGAGAATTTCGCGAGATTCATTCACTAGAGAACGAAACAGTGAAAATCAGTTGTCCTACACCAAACGCAGGGGGCTATACCATTCGTTGGTTTGAGGATAAAAAGCTAATGAAAACGAACGAATCATATCTAAAACTCGAAAAATTGAAGGAAGAGAGTGTCGAATATTATACGTGCCGTGTTAGTGACAGAAACGGATCGAATTCCACCACATTTGAAGTGAACGTTGGGAAGAAGCCTAGGTTTTTGGCCTACCGCAGCCCGCTGGTAAAATGGCAAGGACAGAACTCCCTAGACTGTAAAGTGTCAACATCGCCATCTACAAATACGATCCAGTGGTTCCACAACGGGAACCTTATCGTCAACATAACAACTAATGATACAGCTCCGTTGGCCTGGCGAGTTTTCGACTGGGGACAGTACGTGTGCCAGATAAAAAACATCCACGGTACTCTGACAAGGAGTTTCAACGTAACTTCGGATGGCCTTGGATTCGCCCAGCCCAAGACCGCTTTAAGACCATTTGCGATGCTTTTAACACCGTAA

Protein

MLTELKFFHDFQKYPDFVYRSILTVESVKKSEKYVCRASNKVGQISVEVNVTVLGDRPKFRQSLSTTAVMEGTEAVIRCKIAEGKPKPTIKWIVNSKSPNTNKELSSHIGEELILRNITLSQAGHYICVAENTFGRAQQDTDLIVQAPPKILRREDVPKGIVGDVALSVPCTVSGYPVPTVVWKANDTVTLHSGSKYNITKGNTLIINNLEHVDAYTKYTCVAKNTFGEVNETFDDIIYERPKFRKLVIATSVMEGRDAVIPCKIAEGKPKPTIKWIVNSKSPNTNKELSSHIGEELILRNITLSQAGHYICVAENTFGRAQQDTDLIVQAPPKILRREDVPKGIVGDVALSVPCTVYGYPVPTVVWKANDTVTLHSGSKYNITKGNTLIINNLEHADAYTKYTCVAKNTFGEVNQTFDDIIYERPKFRKPVITTSVMEGRDAVIPCKVAEGKPKPTIKWIVNSKSPNTNKELSSHIGEELILRNITLSQAGHYICVAENTFGRAQQDTDLIVQAPPKILRRGDVPKGIVGDVALSVPCTVSGYPVPTVVWKANDTVTLHSGSKYNITKGNTLIINNLEHADAYTKYTCVAKNTFGEVNQTFSHIITEGLVDFGEFREIHSLENETVKISCPTPNAGGYTIRWFEDKKLMKTNESYLKLEKLKEESVEYYTCRVSDRNGSNSTTFEVNVGKKPRFLAYRSPLVKWQGQNSLDCKVSTSPSTNTIQWFHNGNLIVNITTNDTAPLAWRVFDWGQYVCQIKNIHGTLTRSFNVTSDGLGFAQPKTALRPFAMLLTP

Uniprot

H9JIU0   A0A2A4IXE1   A0A2A4J8M3   A0A1I7U001   A0A1I7U000   A0A3P6T3X3   + More
A0A044SXW9   G5ED27   A0A0M3I664   G5EG33   F1KPK8   A0A158PTR3   A0A158PQT8   A0A158PTR4   A0A1S0U7I4   G5EDG4   F6QWR8   A0A2H1V2M3   A0A158PJ77   A0A1I8F1K3   A0A0N5CZ79   G0MH26   I3JUM9   A0A2H2I8M2   E3MB16   A0A2G5SL97   A0A2G5SM35   A0A2G5SLI7   G3NWN1   A0A3Q1B6M5   G1MRA1   A0A0K0E045   A0A3Q2CT39   A0A3B4Z1V9   S9XZ12   A0A368GA16   A0A2I4B518   A0A3Q2V180   A0A1S3KK63   A0A3B4WM49   A0A401SHF0   A0A3B4G3M3   A0A158Q3H4   A0A261CM28   A0A261CMG6   A0A3B4UEA3   L8Y5J4   A0A1S3KK60   A0A383YVW7   A0A3P8WNL8   A0A1S3KKA0   L5KZE1   A0A3S2N4W0   A0A1U7UYH7   A0A3Q0CW37   A0A3Q3GU11   A0A238BPI7   F6RH77   A0A3Q3K3Y4   A0A1L8GNR0   A0A2K5ZYP4   A0A090MWS1   A0A1D5PY27   A0A1D5PQF5   A0A3Q3AIK5   A0A1D5PWR7   A0A1D5NYH4   U3JKT4   A0A016S725   A0A1D5PMN5   A0A016S7D9   H3ESK1   A0A016S7N7   A0A016S6K3   A0A016S6H1   A0A0N5BTT6   A0A2D0T6P7   A0A0L8IEA4   A0A1S3FKW3   E0VC72   A0A3Q3L4X2   G3PEC7   F1QVQ2   A0A1S3WC56   A0A437B1H8   D7PS96   A0A087Y670   F6ZIH2   F1R7R3   A0A1W5AAI4   A0A016S6G4   A0A016S6J7   A0A016S718   A0A1E1WM33   A0A016S7D2   F6ZIS0   A0A1W5BCH0   K7G886   A0A2Y9J8P7  

Pubmed

19121390    9851916    11222143    21685128    17885136    17495919    + More
26850696    25186727    20838655    23149746    30297745    23385571    24487278    23258410    26319212    20431018    27762356    15592404    25730766    18806794    20566863    23594743    20419147    12481130    15114417    17381049   

EMBL

BABH01023204    BABH01023205    NWSH01005792    PCG63944.1    NWSH01002649    PCG67762.1    + More
UYRX01000469    VDK82636.1    CMVM020000118    BX284606    CAA87335.1    AF074901    AAC26792.1    CAA87336.1    JI163836    ADY39812.1    UZAD01013133    VDN89504.1    JH712067    EFO26418.1    CAR64665.1    ODYU01000391    SOQ35095.1    UYYA01004155    VDM60010.1    UYYF01004362    VDN03059.1    GL379794    EGT58071.1    AERX01012991    AERX01012992    AERX01012993    AERX01012994    AERX01012995    DS268432    EFO97259.1    PDUG01000006    PIC15895.1    PIC15896.1    PIC15897.1    KB017072    EPY80556.1    JOJR01000244    RCN41236.1    BEZZ01000266    GCC29770.1    UYYG01001157    VDN56794.1    NIPN01000003    OZG23095.1    OZG23096.1    KB365123    ELV11507.1    KB030474    ELK16173.1    CM012440    RVE73540.1    KZ270051    OZC06924.1    AAMC01026251    AAMC01026252    AAMC01026253    AAMC01026254    AAMC01026255    AAMC01026256    AAMC01026257    CM004472    OCT85460.1    LN609528    CEF64174.1    AADN05000650    AGTO01000523    JARK01001618    EYB86276.1    EYB86277.1    EYB86274.1    EYB86273.1    EYB86275.1    KQ415893    KOF99797.1    DS235048    EEB10978.1    BX248238    BX957305    RSAL01000206    RVE44350.1    GU936666    ADI46643.1    AYCK01004151    AYCK01004152    AYCK01004153    EAAA01002470    EYB86265.1    EYB86268.1    EYB86266.1    GDQN01003046    JAT88008.1    EYB86267.1    AGCU01004760    AGCU01004761    AGCU01004762    AGCU01004763    AGCU01004764    AGCU01004765    AGCU01004766    AGCU01004767    AGCU01004768    AGCU01004769   

Proteomes

UP000005204    UP000218220    UP000095282    UP000277928    UP000024404    UP000001940    + More
UP000036681    UP000006672    UP000038020    UP000278627    UP000002280    UP000050601    UP000267027    UP000093561    UP000046394    UP000276776    UP000008068    UP000005207    UP000005237    UP000008281    UP000230233    UP000007635    UP000257160    UP000001645    UP000035681    UP000265020    UP000261400    UP000252519    UP000192220    UP000264840    UP000087266    UP000261360    UP000287033    UP000261460    UP000038040    UP000274756    UP000216463    UP000261420    UP000011518    UP000261681    UP000265120    UP000010552    UP000189704    UP000189706    UP000261660    UP000008143    UP000261600    UP000186698    UP000233140    UP000035682    UP000000539    UP000016665    UP000024635    UP000005239    UP000046392    UP000221080    UP000053454    UP000081671    UP000009046    UP000261640    UP000000437    UP000079721    UP000283053    UP000028760    UP000008144    UP000192224    UP000007267    UP000248482   

PRIDE

H9JIU0    A0A1D5PWR7   

Pfam

PF07679   I-set        + More
PF01223   Endonuclease_NS
PF07645   EGF_CA
PF13895   Ig_2
PF12662   cEGF
PF07474   G2F
PF00090   TSP_1
PF00047   ig
PF13519   VWA_2

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR003598   Ig_sub2       
IPR013098   Ig_I-set       
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR036465   vWFA_dom_sf       
IPR001604   DNA/RNA_non-sp_Endonuclease       
IPR018097   EGF_Ca-bd_CS       
IPR013032   EGF-like_CS       
IPR000742   EGF-like_dom       
IPR000152   EGF-type_Asp/Asn_hydroxyl_site       
IPR001881   EGF-like_Ca-bd_dom       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR026823   cEGF       
IPR013106   Ig_V-set       
IPR009017   GFP       
IPR006605   G2_nidogen/fibulin_G2F       
IPR000884   TSP1_rpt       
IPR036383   TSP1_rpt_sf       
IPR016130   Tyr_Pase_AS       
IPR013151   Immunoglobulin       
IPR002035   VWF_A       
IPR032984   Hemicentin-2       

SUPFAM

SSF48726   SSF48726        + More
SSF53300   SSF53300       
SSF57184   SSF57184       
SSF54511   SSF54511       
SSF82895   SSF82895       

Gene 3D

2.60.40.10     3.40.50.410     2.20.100.10    

CDD

cd00255  nidG2

ProteinModelPortal

H9JIU0   A0A2A4IXE1   A0A2A4J8M3   A0A1I7U001   A0A1I7U000   A0A3P6T3X3   + More
A0A044SXW9   G5ED27   A0A0M3I664   G5EG33   F1KPK8   A0A158PTR3   A0A158PQT8   A0A158PTR4   A0A1S0U7I4   G5EDG4   F6QWR8   A0A2H1V2M3   A0A158PJ77   A0A1I8F1K3   A0A0N5CZ79   G0MH26   I3JUM9   A0A2H2I8M2   E3MB16   A0A2G5SL97   A0A2G5SM35   A0A2G5SLI7   G3NWN1   A0A3Q1B6M5   G1MRA1   A0A0K0E045   A0A3Q2CT39   A0A3B4Z1V9   S9XZ12   A0A368GA16   A0A2I4B518   A0A3Q2V180   A0A1S3KK63   A0A3B4WM49   A0A401SHF0   A0A3B4G3M3   A0A158Q3H4   A0A261CM28   A0A261CMG6   A0A3B4UEA3   L8Y5J4   A0A1S3KK60   A0A383YVW7   A0A3P8WNL8   A0A1S3KKA0   L5KZE1   A0A3S2N4W0   A0A1U7UYH7   A0A3Q0CW37   A0A3Q3GU11   A0A238BPI7   F6RH77   A0A3Q3K3Y4   A0A1L8GNR0   A0A2K5ZYP4   A0A090MWS1   A0A1D5PY27   A0A1D5PQF5   A0A3Q3AIK5   A0A1D5PWR7   A0A1D5NYH4   U3JKT4   A0A016S725   A0A1D5PMN5   A0A016S7D9   H3ESK1   A0A016S7N7   A0A016S6K3   A0A016S6H1   A0A0N5BTT6   A0A2D0T6P7   A0A0L8IEA4   A0A1S3FKW3   E0VC72   A0A3Q3L4X2   G3PEC7   F1QVQ2   A0A1S3WC56   A0A437B1H8   D7PS96   A0A087Y670   F6ZIH2   F1R7R3   A0A1W5AAI4   A0A016S6G4   A0A016S6J7   A0A016S718   A0A1E1WM33   A0A016S7D2   F6ZIS0   A0A1W5BCH0   K7G886   A0A2Y9J8P7  

PDB

6IAA     E-value=4.36426e-37,     Score=391

KEGG

101742719    K17341 hemicentin | (RefSeq) hemicentin-2-like

GO

GO:0046872   GO:0016787   GO:0003676   GO:0005509   GO:0005604   GO:0038023   GO:0007156   GO:0007157   GO:0005913   GO:0050839   GO:0042803   GO:0034769   GO:0031012   GO:0005201   GO:0071711   GO:0005938   GO:0030054   GO:0009617   GO:0033334   GO:0016021   GO:0033333   GO:0005515   GO:0003917   GO:0016887   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR45889:SF4  

Length:

794

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00619999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00012

outside

1  -  794

 

 

Pi

179.621041

Theta

163.277299

Tajima's D

0.830861

CLR

1.532138

CSRT

0.603869806509674

Interpretation

Uncertain