Gene

KWMTBOMO08257

Annotation

PREDICTED:_GDP-D-glucose_phosphorylase_1_[Papilio_machaon]

Location

Bomo_Chr14(-):2870680-2873288      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.083 Nuclear   Reliability : 1.949

CDS

ATGGAAAGACAAAATGATTTCAAAAATGTACCAAACTTATTCGAGGAAATACTTAAAAAAAAATGGGACGAAATACACGAGGGACCTAAAGTGTTTCGTTACAAAATTAAAGAAATAAATGAAAAATATTTACAAGAAAAATATCTAATTCAGTTAAATCCTGATCGTGGCAAAAAGAGAAGGGAGCCTGAAGCTATACACAGTCTTTCTCAACCGTTTGATGAAACAAAATTTAATTTTATGAAGGCATCATCTAATGAGATTTTACTAACTCTTATTAATGGAAATGAAGAACATGTTTTCTTGGTAAACGTAAGTCCAATTGCACGTTACCACATATTATTCTGCCCTTCCATGGGAAGTTGTCTTCCGCAAACAATAACACTAGATAGTCTAGAATTTGTTGCCGAAATGATGTTTGCATCGCAGGACCGTGATCTAAGAATTGGCTTCAACAGCCTCTGCGCATTTGCATCAGTCAATCATCTGCATTACCATTTATTATTTGAAAAGAGGACATTGTATATAGAGCAAGTGAAATGGAATCATTTAAAAGGACCTGTATATTTCAAGGAAGATTATCCTGTTCCAGCATTTTGTTGCAATATAAAAAAACTATCAGAAACTATCAATGCTTATATTCTTATAAAATATTTAGTGGATAAATCTATTGCTCACAATGTTTTAATAACAAATCGAAAATCACAAGAGACAGGAGTTCATGTTATAATTTGGCCTCGGAAAAAAACAGAAGGCGCCAAACAGTTTACAGATTTTAATGTTGCCATATGTGAACTCAGTGGATGGATTCCTATTTACGATGAAGAGACATACAGAAAAATAACAGCAGAACAAATTGAAGATGAATTAAAGAAATGGAAGTTAGATGATTTTTTTGAGCTATGTGAAGGAATCAAGTCCTTGTATTGA

Protein

MERQNDFKNVPNLFEEILKKKWDEIHEGPKVFRYKIKEINEKYLQEKYLIQLNPDRGKKRREPEAIHSLSQPFDETKFNFMKASSNEILLTLINGNEEHVFLVNVSPIARYHILFCPSMGSCLPQTITLDSLEFVAEMMFASQDRDLRIGFNSLCAFASVNHLHYHLLFEKRTLYIEQVKWNHLKGPVYFKEDYPVPAFCCNIKKLSETINAYILIKYLVDKSIAHNVLITNRKSQETGVHVIIWPRKKTEGAKQFTDFNVAICELSGWIPIYDEETYRKITAEQIEDELKKWKLDDFFELCEGIKSLY

Uniprot

A0A0N1PIB3   A0A2H1VC57   A0A2A4K8G0   A0A2W1BR17   A0A0N1I380   S4PK80   + More
A0A212FL46   V4CHL4   A0A232EYD1   A0A2R5LC76   A0A2J7PZT0   A0A023GIW8   G3MPU4   K7JEN9   A0A0L7QPH6   A0A1Z5KX40   A0A1B6FSK5   A0A1E1XV02   A0A026WV65   A0A1B6JDW4   A0A023FKZ3   L7MM46   A0A3L8D9J4   A0A0K8TR75   A0A1B6I1Z6   A0A1B6E461   A0A2P8Y536   A0A210Q3S8   A0A1E1X625   A0A158NA10   A0A131Z6Q9   A0A154PDL4   T1JLX4   F4WC51   V5IF92   A0A151WH84   Q16Q87   A0A2L2Y6F5   A0A1S4FT07   A0A131XJQ4   A0A2H8TZZ3   A0A336LIL9   A0A369S7V7   B3RJU5   A0A195CUU9   A0A0L0C653   B3NCH0   A0A1A9WTA9   C4WWB8   A7SA65   A0A336LMW2   J9K070   B4N550   A0A1I8PXV9   R7TH55   B7QKM6   B4PEW0   A0A0J9RTM2   A0A023FYJ2   A0A0C9R9F1   A0A1B0FBG7   K7FA10   A0A1B6LSQ1   B4HL47   A0A444SDR4   A0A182GL93   B4H1Y0   Q8T4A7   A0A3Q3X5N0   Q9VSZ5   A0A0M4EY76   A0A195BK97   A0A2U9BZ17   A0A2T7NYM4   A0A2U9BWH0   Q29EF0   A0A226DBA0   A0A1B0BC44   A0A1W4U8R3   B0X8E0   A0A195ELG7   A0A1A9Y055   A0A2A3ENG5   A0A0K8TYC0   A0A2U9BX44   A0A401P1W8   A0A1J1I6C1   A0A1A9UG16   A0A1D2M4S6   A0A3S0ZWE9   A0A0V0GC68   A0A1B0DFM8   B4IXD4   A0A0P6FX87   A0A034VQD4   A0A0P5MGV6   G3WC22   A0A3Q3E0L3   A0A0N8CGB7  

Pubmed

26354079    28756777    23622113    22118469    23254933    28648823    + More
22216098    20075255    28528879    29209593    24508170    25576852    30249741    26369729    29403074    28812685    28503490    21347285    26830274    21719571    25765539    17510324    26561354    28049606    30042472    18719581    26108605    17994087    17615350    17550304    22936249    17381049    26483478    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    30297745    27289101    25348373    21709235   

EMBL

KQ460426    KPJ14774.1    ODYU01001573    SOQ37982.1    NWSH01000071    PCG79960.1    + More
KZ149927    PZC77539.1    KQ459256    KPJ02069.1    GAIX01004650    JAA87910.1    AGBW02007925    OWR54420.1    KB200454    ESP01625.1    NNAY01001637    OXU23353.1    GGLE01002976    MBY07102.1    NEVH01020332    PNF21845.1    GBBM01001511    JAC33907.1    JO843895    AEO35512.1    KQ414821    KOC60459.1    GFJQ02007609    GFJQ02000416    JAV99360.1    GECZ01016668    JAS53101.1    GFAA01000488    JAU02947.1    KK107105    EZA59551.1    GECU01010312    JAS97394.1    GBBK01002802    JAC21680.1    GACK01000725    JAA64309.1    QOIP01000011    RLU16578.1    GDAI01000975    JAI16628.1    GECU01026760    JAS80946.1    GEDC01004575    JAS32723.1    PYGN01000918    PSN39365.1    NEDP02005114    OWF43365.1    GFAC01004475    JAT94713.1    ADTU01009933    GEDV01001523    JAP87034.1    KQ434869    KZC09338.1    JH432212    GL888070    EGI68031.1    GANP01008842    JAB75626.1    KQ983135    KYQ47165.1    CH477757    EAT36557.1    IAAA01018561    IAAA01018562    LAA03718.1    GEFH01001999    JAP66582.1    GFXV01008042    MBW19847.1    UFQT01000014    SSX17696.1    NOWV01000045    RDD42988.1    DS985241    EDV29845.1    KQ977276    KYN04430.1    JRES01000850    KNC27736.1    CH954178    EDV51200.2    AK341972    BAH72188.1    DS469607    EDO39439.1    SSX17697.1    ABLF02037634    ABLF02037635    CH964101    EDW79489.1    AMQN01013027    KB309911    ELT93039.1    ABJB010178864    ABJB010298124    ABJB010680020    ABJB010685717    ABJB010876631    ABJB011025363    DS961247    EEC19398.1    CM000159    EDW93015.2    CM002912    KMY98659.1    GBBL01001507    JAC25813.1    GBYB01009542    JAG79309.1    CCAG010019566    AGCU01123460    GEBQ01013333    JAT26644.1    CH480815    EDW40866.1    SAUD01040768    RXG51546.1    JXUM01014237    KQ560397    KXJ82630.1    CH479203    EDW30332.1    AY089279    AAL90017.1    AE014296    AAF50263.1    ACL83281.1    CP012525    ALC43412.1    KQ976455    KYM85073.1    CP026252    AWP08679.1    PZQS01000008    PVD26233.1    AWP08678.1    CH379070    EAL30111.3    LNIX01000025    OXA42802.1    JXJN01011846    DS232485    EDS42476.1    KQ978739    KYN28724.1    KZ288206    PBC33044.1    GDHF01033224    GDHF01017262    JAI19090.1    JAI35052.1    AWP08680.1    AWP08681.1    BFAA01007078    GCB67139.1    CVRI01000041    CRK95274.1    LJIJ01004420    ODM87911.1    RQTK01000104    RUS87651.1    GECL01000417    JAP05707.1    AJVK01015130    CH916366    EDV96371.1    GDIQ01052433    JAN42304.1    GAKP01014640    JAC44312.1    GDIQ01257071    GDIQ01205906    GDIQ01204355    GDIQ01167569    GDIQ01044427    JAK84156.1    AEFK01006232    GDIP01134511    LRGB01001409    JAL69203.1    KZS12058.1   

Proteomes

UP000053240    UP000218220    UP000053268    UP000007151    UP000030746    UP000215335    + More
UP000235965    UP000002358    UP000053825    UP000053097    UP000279307    UP000245037    UP000242188    UP000005205    UP000076502    UP000007755    UP000075809    UP000008820    UP000253843    UP000009022    UP000078542    UP000037069    UP000008711    UP000091820    UP000001593    UP000007819    UP000007798    UP000095300    UP000014760    UP000001555    UP000002282    UP000092444    UP000007267    UP000001292    UP000288706    UP000069940    UP000249989    UP000008744    UP000261620    UP000000803    UP000092553    UP000078540    UP000246464    UP000245119    UP000001819    UP000198287    UP000092460    UP000192221    UP000002320    UP000078492    UP000092443    UP000242457    UP000288216    UP000183832    UP000078200    UP000094527    UP000271974    UP000092462    UP000001070    UP000007648    UP000261660    UP000076858   

PRIDE

Q8T4A7    Q9VSZ5   

Pfam

PF10545   MADF_DNA_bdg        + More
PF00096   zf-C2H2
PF07776   zf-AD
PF00373   FERM_M
PF00595   PDZ
PF08660   Alg14
PF09380   FERM_C

Interpro

IPR036265   HIT-like_sf        + More
IPR026506   GDPGP       
IPR006578   MADF-dom       
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR036034   PDZ_sf       
IPR001478   PDZ       
IPR019748   FERM_central       
IPR029071   Ubiquitin-like_domsf       
IPR000299   FERM_domain       
IPR018980   FERM_PH-like_C       
IPR019749   Band_41_domain       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR035963   FERM_2       
IPR013969   Oligosacch_biosynth_Alg14       
IPR019747   FERM_CS       

SUPFAM

SSF54197   SSF54197        + More
SSF57667   SSF57667       
SSF50156   SSF50156       
SSF47031   SSF47031       
SSF54236   SSF54236       

Gene 3D

3.30.428.10     1.20.80.10    

CDD

cd14473  FERM_B-lobe

ProteinModelPortal

A0A0N1PIB3   A0A2H1VC57   A0A2A4K8G0   A0A2W1BR17   A0A0N1I380   S4PK80   + More
A0A212FL46   V4CHL4   A0A232EYD1   A0A2R5LC76   A0A2J7PZT0   A0A023GIW8   G3MPU4   K7JEN9   A0A0L7QPH6   A0A1Z5KX40   A0A1B6FSK5   A0A1E1XV02   A0A026WV65   A0A1B6JDW4   A0A023FKZ3   L7MM46   A0A3L8D9J4   A0A0K8TR75   A0A1B6I1Z6   A0A1B6E461   A0A2P8Y536   A0A210Q3S8   A0A1E1X625   A0A158NA10   A0A131Z6Q9   A0A154PDL4   T1JLX4   F4WC51   V5IF92   A0A151WH84   Q16Q87   A0A2L2Y6F5   A0A1S4FT07   A0A131XJQ4   A0A2H8TZZ3   A0A336LIL9   A0A369S7V7   B3RJU5   A0A195CUU9   A0A0L0C653   B3NCH0   A0A1A9WTA9   C4WWB8   A7SA65   A0A336LMW2   J9K070   B4N550   A0A1I8PXV9   R7TH55   B7QKM6   B4PEW0   A0A0J9RTM2   A0A023FYJ2   A0A0C9R9F1   A0A1B0FBG7   K7FA10   A0A1B6LSQ1   B4HL47   A0A444SDR4   A0A182GL93   B4H1Y0   Q8T4A7   A0A3Q3X5N0   Q9VSZ5   A0A0M4EY76   A0A195BK97   A0A2U9BZ17   A0A2T7NYM4   A0A2U9BWH0   Q29EF0   A0A226DBA0   A0A1B0BC44   A0A1W4U8R3   B0X8E0   A0A195ELG7   A0A1A9Y055   A0A2A3ENG5   A0A0K8TYC0   A0A2U9BX44   A0A401P1W8   A0A1J1I6C1   A0A1A9UG16   A0A1D2M4S6   A0A3S0ZWE9   A0A0V0GC68   A0A1B0DFM8   B4IXD4   A0A0P6FX87   A0A034VQD4   A0A0P5MGV6   G3WC22   A0A3Q3E0L3   A0A0N8CGB7  

KEGG

101737046    K15630 GDP-D-glucose phosphorylase [EC:2.7.7.78] | (RefSeq) GDP-D-glucose phosphorylase 1

GO

GO:0080048   GO:0005634   GO:0003676   GO:0008270   GO:0005856   GO:0005737   GO:0006006   GO:0006488   GO:0003824   GO:0015074   GO:0046872   GO:0003917   GO:0016887   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR20884  

Length:

309

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.723600000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.11135

outside

1  -  309

 

 

Pi

153.282998

Theta

151.397362

Tajima's D

0.019262

CLR

89.761006

CSRT

0.381230938453077

Interpretation

Uncertain