Gene

KWMTBOMO08255

Annotation

PREDICTED:_small_integral_membrane_protein_20-like_[Papilio_machaon]

Location

Bomo_Chr14(-):2851581-2852568      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.825

CDS

ATGGCTATATTTCGTGGTTGGCGTTACACAGCTTTTATCGGCGGTTTTATTGGTTTATTAGGATTAACTCTTTATCCGATAGCAATAAGTCCGATGATCGATGTCTCTGAATACAAACAGATTCAAAAAGAAGCTAGAAAAAACATACGACAAGAAGACATCCAACCTGGAAATATGAAAGTATGGTCCGATCCATTCGAACGAAAGAAACCGGAGCATGATTGA

Protein

MAIFRGWRYTAFIGGFIGLLGLTLYPIAISPMIDVSEYKQIQKEARKNIRQEDIQPGNMKVWSDPFERKKPEHD

Uniprot

A0A2W1BR75   A0A2H1VAV2   A0A3S2L8C1   A0A0N0PE42   A0A0N0PA81   S4PV53   + More
A0A212FE52   U4UMH2   D6WAU5   A0A0P4VV10   A0A336K489   A0A0K8TN74   A0A0P4VJ69   A0A069DMY6   A0A444TJI7   A0A224Y5D3   A0A067R955   A0A0V0G5R5   A0A1D2N3L7   A0A023F3X8   E9FSU6   A0A2R5LHA0   A0A1Q3FK08   A0A1J1IIH5   Q17IM2   B0XFX5   A0A2M3ZC94   A0A2M4C581   W5JWH2   A0A2P6K6A0   A0A087TPK5   A0A2M3ZCJ7   A0A2M4AX56   A0A182S541   A0A182QGK4   A0A182P7H7   A0A182YL98   A0A210Q3M1   A0A2L2YD04   A0A182JSJ8   A0A182W1X2   A0A182HHD8   A0A182XGS1   A7UVG2   A0A098M1G5   A0A0B8RYC6   J9JZC4   J3SE29   T1E6B9   A0A3B1K6W9   G3IM87   D3Z7Q2   A0A1A6FX81  

Pubmed

28756777    26354079    23622113    22118469    23537049    18362917    + More
19820115    26369729    27129103    26334808    24845553    27289101    25474469    21292972    17510324    20920257    23761445    25244985    28812685    26561354    12364791    14747013    17210077    25476704    23025625    23758969    25727380    25329095    21804562    23929341    19468303    21183079   

EMBL

KZ149927    PZC77538.1    ODYU01001573    SOQ37980.1    RSAL01000718    RVE41193.1    + More
KQ459986    KPJ18839.1    KQ458751    KPJ05307.1    GAIX01009138    JAA83422.1    AGBW02008987    OWR51967.1    KB632368    ERL93688.1    KQ971312    EEZ97948.2    GDRN01094144    JAI59756.1    UFQS01000094    UFQT01000094    SSW99261.1    SSX19641.1    GDAI01002223    JAI15380.1    GDKW01002425    JAI54170.1    GBGD01003679    JAC85210.1    SAUD01002228    RXG70172.1    GFTR01000727    JAW15699.1    KK852614    KDR20208.1    GECL01003056    JAP03068.1    LJIJ01000272    ODM99525.1    GBBI01003058    JAC15654.1    GL732524    EFX89256.1    GGLE01004770    MBY08896.1    GFDL01007190    JAV27855.1    CVRI01000054    CRL00027.1    CH477238    EAT46538.1    DS232970    EDS27094.1    GGFM01005426    MBW26177.1    GGFJ01011332    MBW60473.1    ADMH02000153    ETN67575.1    MWRG01024141    PRD21842.1    KK116199    KFM67044.1    GGFM01005526    MBW26277.1    GGFK01011971    MBW45292.1    AXCN02001095    NEDP02005120    OWF43343.1    IAAA01017061    LAA06031.1    APCN01002407    AAAB01008986    EDO63349.1    GBSI01000399    JAC96096.1    GBSH01000487    JAG68537.1    ABLF02039537    JU174025    GBEX01000488    AFJ49551.1    JAI14072.1    GAAZ01000365    GBKC01000510    GBKD01000328    JAA97578.1    JAG45560.1    JAG47290.1    JH004550    KE663546    EGW14980.1    ERE91310.1    AC122522    AC134463    LZPO01116962    OBS58199.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000007151    UP000030742    UP000007266    + More
UP000288706    UP000027135    UP000094527    UP000000305    UP000183832    UP000008820    UP000002320    UP000000673    UP000054359    UP000075900    UP000075886    UP000075885    UP000076408    UP000242188    UP000075881    UP000075920    UP000075840    UP000076407    UP000007062    UP000007819    UP000018467    UP000001075    UP000030759    UP000000589    UP000092124   

PRIDE

D3Z7Q2   

Pfam

PF15061   DUF4538

Interpro

IPR027917   SMIM20       

ProteinModelPortal

A0A2W1BR75   A0A2H1VAV2   A0A3S2L8C1   A0A0N0PE42   A0A0N0PA81   S4PV53   + More
A0A212FE52   U4UMH2   D6WAU5   A0A0P4VV10   A0A336K489   A0A0K8TN74   A0A0P4VJ69   A0A069DMY6   A0A444TJI7   A0A224Y5D3   A0A067R955   A0A0V0G5R5   A0A1D2N3L7   A0A023F3X8   E9FSU6   A0A2R5LHA0   A0A1Q3FK08   A0A1J1IIH5   Q17IM2   B0XFX5   A0A2M3ZC94   A0A2M4C581   W5JWH2   A0A2P6K6A0   A0A087TPK5   A0A2M3ZCJ7   A0A2M4AX56   A0A182S541   A0A182QGK4   A0A182P7H7   A0A182YL98   A0A210Q3M1   A0A2L2YD04   A0A182JSJ8   A0A182W1X2   A0A182HHD8   A0A182XGS1   A7UVG2   A0A098M1G5   A0A0B8RYC6   J9JZC4   J3SE29   T1E6B9   A0A3B1K6W9   G3IM87   D3Z7Q2   A0A1A6FX81  

KEGG

101736915    no KO assigned | (RefSeq) small integral membrane protein 20

GO

GO:0033617   GO:0016021   GO:0005739   GO:0005743  

PANTHER

PTHR34923  

Length:

74

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.18521

Exp number, first 60 AAs:

22.18521

Total prob of N-in:

0.94134

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  74

 

 

Pi

278.215407

Theta

182.336913

Tajima's D

1.707011

CLR

0.073805

CSRT

0.832808359582021

Interpretation

Uncertain