Silkworm Genome Informatics Database

Gene

KWMTBOMO08247

Pre Gene Modal

BGIBMGA009450

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_protein_piccolo_[Bombyx_mori]

Location

Bomo_Chr14(-):2621046-2636733 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.108

CDS

ATGGCGGATGGCGAGGCGGAAGCGGTGGCGGGCGAGGAGGCGGCCCGGAACGCGGGGATCGAGCGCACCTACGTGCACGACGTGTACGACCTCGCCGGCGAGGAGGACGGCGCCGCCGCTCCGCCCGTGCAGGCCTTCCTCTCTGAACTCGAGCCCGGCAGCCTGGTCTGTGACGTCGGATGCGGCAATGGAAAATACCTGAGCATGAACCCATCAGTGTACACGGTGGGTGGCGATCGATGCACCAGACTCGCAGAGCACGCCCGAAACGATAGCAATGAGGTGGTCGTGTGCGACAACCTGTGCTTGCCATTTCGCGACGAGTCCTTCGACGCTGTGCTGTCCATTGCTGTGGTCCATCACTTTGCGACGGTCGAACGTCGAGCTATGGCCTTGAGGGAGCTGGCCAGAGTCACCAGGATCGGAGGACGATTGCTGCTCACCGTCTGGGCCATGGAGCACGAGGGGCGAAATTTCCATTGTCAGGACGTTTTGATCCCGTGGCATCGTCCACCGACGCTCTGCCCGCCAACACCAACGCCACGGTTCCTCTCGGTCGATAATGATCAAAACGTAGAGCACTGGAAATGTCGTGAAGGCTCACCGGGTTCCTCTTCACTATCTTCACCCAACGAAACATGCTATTCGTTTGTAAGAAGAGCTTTACAGAGATTAGCTGGAAGACGCTCGTTTTTACCTTCGTGGAGTATAGGCTCAAGGGTACCTTCGAGGATATGCTCACGTCCTGAACCACTAGCTAGTGATCTACCAATAGAACTCCGACACTTAGATGAGACAGTTCCTCTGCGACTGGTACCTCAAGGATCTGATTCATCGACAATTAAATCTCAGAGTCTGACTGACATCGCTGAGGTAGAACGACATACACTAGTTCGATCACGCTCGAGTCTGCCTAGTTTAGGAGGTGATGAGCACGAGCAACCACAACAGCAGTTAGTCCCAAAACCGCCAACTTCTGAGGTTATTGAACCCAGGAAGAAGCCAAAATTAGTCAAGCAAAAGAAATCCATCAACGAGGATGATGCGGAGGAAGACCTTGATAAGCCAACGGACATGAAGAGTCTGGTTGAAGAGATGCCAAATTTTAAAATACACCCGCAAAAATTAAACACGAAGAAGCCAGATTTTATCAAACAAACCTCACTTAATGAAGAGCTAATGTCTGTCGAAAGATTAAGAGAAAAAGAGCACCTAAGAAAAAACATACAAAAACAAGCTTCGCTAAACGAAGAGTATCTGTACCGCAGACCGGGTGCTTTGGATTCAATACGAGACTCAATATTTTCAACTTCAGCGACGACAGCTAAAAAGTTCCAGTCTCTCAAAAACGGCCTCACTAGTAAATTCAGAACGTCCACAACGAATATAGATAGAGTAACAATATTCGTGAGAATGCTGCAAGGTTGGAAAAGTCATGGTACAGTTCCTGAGGTTGCTACTCCAAGCGAACATGTTGCAGGCTTAGACAAATGCTGTCCTGAAAGACGACATTCAAAAGAAGACGGATCGGACTCTTCTAAAGATAGCAGTCTACAGAGTGACACAAGTGTGGATTCGGAAGACAGCTTCGCATCTGTGATATATGTACCAAAAGCGGACGGATCAGGAGATCCTCTATCGCCTACGCCCCTCTCGCCTGGTCCAACATCACCTCGATTAAAAGTGTCATCAGTCCCGACGTCTCCAAGAATGAAAAGTTCTCCGGGCTTACCATCGCCGAGAATGAAACAATCTTTTCCTCTCATTCGTCCACCAGCTTCCCCAGGTGCCGTCACTCCTGCAACAGTGAACAAAATACTCGTTACACAATATAGTTTAAAAAATTACTCAACATCGAATTCAGTTTGTCCTTTGAAACCTCAATCGAAAAGCCAGCCAAATTCTCCGCCTAAATCTGAATCTGATGACAAAGCTCCAAAGGTTGAACCTATGCCTGTTATAAATAATAACATACCTATTGACGTATTTGAAGAGATTGATCCGATTCCACCCATTAAAGAAGAAGAAGAAAATCCATTGGAGACAACGCAAGATTTAATAGCAGAAATAAACAAGGACATTGAAGAAATCCATAAACTAACAGAGGAATCAGAACAATTAATGCCTCGTGTACTACAAGACGTGAAACCCTACCCAAAAATAACATTGCAAACTGTTGCGGAATTACCGGAAATTCCACAATTCAAACCTAAAGAACCACCTAGCAAATCTCCTACCACCGACATCTTAGACTCTAGAGCAGCAGAACGTAAACGTAAGGAAAGGATACGACAAATCAAGGAGATGTTAAACAAAGGAATACCTAACGTTAACATTAGCAGAAGACAACCTTTTCCTATAGTCAGATGCACAAATAAATCTGAGCCGATTGCAAAGAGTCGACCAACACTGATGTCTCTGGAACTGTTTAACCCCGCTACAGATGACATGGATAGCGACTCGAGCGGCGTCTCATCCCCAGATTCAGTGGACAGCGTTATAAGCGTTGTACCTGACGAATTAAGGAAAATCGCTTCTGAAAAAGATTCACAAAACCCTGCAACCGTCGTTACAATTTGTAAAGAAGACTCATTGACCGATAAACTTATAGCCGTGCCTCCAGCTCCACAAACATTAATTGAGGCTGCGGCAGAAGTGGCCACAACTTTAGAAGAAACTTGTGAAACTGTTATCCAGTCCAGCCCAAGATCGAGAAGGAAACAACTCGCAAAGCTTGAAAGTACTGAGGCCATAGCGATCATTCAAGGAGCTTCAAGTAGTAGCAGCAGTAGTAATTGGAGCTTAAATAAGCTCTCTCCCGGTGACCTAAGGTTAATAGAGGATAAATCCAGGTCACAGTCTCACACTAGTTCCAGCGGCAGTTCATCTAGCTTAGAACGGCTTTCACCAGGAAGGAGATCAAAAGATCGCTCCCCTAAATTGGGCAGTACTAGCAACTCCACGTGGAGCTTAAATAGGCTTTCCCCAAATCGACCTGAAGGCCGATCCCTAGAAGAGAACTTGAGTAAAAGTCACAGAAGCCCGACAAGGCTACCGTACGATTCAATATCAATATCGAGTACCGATTCAGATAAATCTATTTCAAAATCGGAAAGCTTCAATAGGATACACGCAAACGAGCCGCTAGTCACATGCAAGTCCGATATAGTACCGAAAGAAGAAAACTGGGTCGTCACAGACAAGGACCGGTCTAATCACCTAACAGAATTTGCGGAGAAACTTAGTGAAAAACTCTTACAAGAAATCGACCAATACTCGAAACGTATTAATGAGGAAGATTTCGACCTACCAAGCAGCAGTAGTAGCGAGAAGAGTATTTCCCTTAGATTAAAACGGGAAGAAGAAGACAGAAATACACAAAAAATCCTAGATGAACTTTCTGACAGTCTCCAACACTTAGAAGACCCATATGTAAACAAAACTAACATTGACAGACAAGGTTTAAATAAGCTCAATACAGATATTCAGGAGCGTACCAAATCTATACCATCGTTGAATGACACCCCAGAAACTGACTTAAACAAATTGTTTCCTAAGTGTAGCAGTAAAATGAAAAGCAGGAAGCGTTCAAAAGACGTGGATCCTATTATCAACAAGTACAGGGAATTTAAGAAAACTATGAAAGTCCCGAGCGACGAAGACCTATACCTCAATAACTGTGCCAACATTTACGCAGCCAAAACGATGACAGAGGAAAAAATTGCTGATATCGACACTAAAAACCCAGACGAAGACAGCGCCATTTGCTCCAGTAACGGAAACCCAGAGATCACGATCGATTCTGGGAATTATGATATTAGTCAGTCTCTGGAAACGGGTTACTCCCTTGAATCAGAAATCAGTATCGATTCTATATGCACAAGTACCGACAAAAGGTCCTCTCTGAAAGTCGGTCAGTCGACAGACTCGAGCGATTTCGACAAAATGGAAATCAGCCCGGAATCGGTAACATCGAGGTCTAGTGCGCCGCTAAAATCCGGCCTCTCGATAGAGTCTACCGACACGTCTGCGGGGAGCGACTGGAGCCGCAGAGACAAGACTGGCAGCACTGCGTCTCTTGGCTGTACGAGCTTAGCATCGCTACCGTCTTGCAGCGACTACTCGAAGGACAAGAAGCTGTTAGAGACAAGGTCGTGTTCGGAGGAGACGGCGCCTATCCCGGCTGCGCACGTGAGACCATTGCCTCATGCACCTCTTCTCCCTTCCCTGAGCGACGGGTCTGACAGCCTGCCATCTGAAGGCGGCGCGGTTACCGTCCACCGGTACTATCACGTCTTCAAACGCGGAGAGCTAGACCAACTCATCGAGAAGTACGTGGAGAGTCTGCACGTGGTTTCATCATACTACGACCAGGCCAGTTGGTGTGTCGTTGCCGAGAAAGTTCAAGTGTGGACCATATAA

Protein

MADGEAEAVAGEEAARNAGIERTYVHDVYDLAGEEDGAAAPPVQAFLSELEPGSLVCDVGCGNGKYLSMNPSVYTVGGDRCTRLAEHARNDSNEVVVCDNLCLPFRDESFDAVLSIAVVHHFATVERRAMALRELARVTRIGGRLLLTVWAMEHEGRNFHCQDVLIPWHRPPTLCPPTPTPRFLSVDNDQNVEHWKCREGSPGSSSLSSPNETCYSFVRRALQRLAGRRSFLPSWSIGSRVPSRICSRPEPLASDLPIELRHLDETVPLRLVPQGSDSSTIKSQSLTDIAEVERHTLVRSRSSLPSLGGDEHEQPQQQLVPKPPTSEVIEPRKKPKLVKQKKSINEDDAEEDLDKPTDMKSLVEEMPNFKIHPQKLNTKKPDFIKQTSLNEELMSVERLREKEHLRKNIQKQASLNEEYLYRRPGALDSIRDSIFSTSATTAKKFQSLKNGLTSKFRTSTTNIDRVTIFVRMLQGWKSHGTVPEVATPSEHVAGLDKCCPERRHSKEDGSDSSKDSSLQSDTSVDSEDSFASVIYVPKADGSGDPLSPTPLSPGPTSPRLKVSSVPTSPRMKSSPGLPSPRMKQSFPLIRPPASPGAVTPATVNKILVTQYSLKNYSTSNSVCPLKPQSKSQPNSPPKSESDDKAPKVEPMPVINNNIPIDVFEEIDPIPPIKEEEENPLETTQDLIAEINKDIEEIHKLTEESEQLMPRVLQDVKPYPKITLQTVAELPEIPQFKPKEPPSKSPTTDILDSRAAERKRKERIRQIKEMLNKGIPNVNISRRQPFPIVRCTNKSEPIAKSRPTLMSLELFNPATDDMDSDSSGVSSPDSVDSVISVVPDELRKIASEKDSQNPATVVTICKEDSLTDKLIAVPPAPQTLIEAAAEVATTLEETCETVIQSSPRSRRKQLAKLESTEAIAIIQGASSSSSSSNWSLNKLSPGDLRLIEDKSRSQSHTSSSGSSSSLERLSPGRRSKDRSPKLGSTSNSTWSLNRLSPNRPEGRSLEENLSKSHRSPTRLPYDSISISSTDSDKSISKSESFNRIHANEPLVTCKSDIVPKEENWVVTDKDRSNHLTEFAEKLSEKLLQEIDQYSKRINEEDFDLPSSSSSEKSISLRLKREEEDRNTQKILDELSDSLQHLEDPYVNKTNIDRQGLNKLNTDIQERTKSIPSLNDTPETDLNKLFPKCSSKMKSRKRSKDVDPIINKYREFKKTMKVPSDEDLYLNNCANIYAAKTMTEEKIADIDTKNPDEDSAICSSNGNPEITIDSGNYDISQSLETGYSLESEISIDSICTSTDKRSSLKVGQSTDSSDFDKMEISPESVTSRSSAPLKSGLSIESTDTSAGSDWSRRDKTGSTASLGCTSLASLPSCSDYSKDKKLLETRSCSEETAPIPAAHVRPLPHAPLLPSLSDGSDSLPSEGGAVTVHRYYHVFKRGELDQLIEKYVESLHVVSSYYDQASWCVVAEKVQVWTI

Uniprot

A0A2W1BXJ1 A0A2A4JKH9 A0A2H1WYY5 A0A212ESW1 A0A0L7LRE7 A0A0N1IAU4 + More
A0A0N1PJ75 A0A437BPU9

Pubmed

28756777 22118469 26227816 26354079

EMBL

KZ149927 PZC77530.1 NWSH01001168 PCG72286.1 ODYU01012144 SOQ58295.1 + More
AGBW02012702 OWR44578.1 JTDY01000245 KOB78073.1 KQ458751 KPJ05314.1 KQ459986 KPJ18845.1 RSAL01000021 RVE52411.1

Proteomes

UP000218220 UP000007151 UP000037510 UP000053268 UP000053240 UP000283053 + More

Pfam

PF08241 Methyltransf_11

Interpro

IPR029063 SAM-dependent_MTases + More
IPR013216 Methyltransf_11

SUPFAM

SSF53335 SSF53335

ProteinModelPortal

A0A2W1BXJ1 A0A2A4JKH9 A0A2H1WYY5 A0A212ESW1 A0A0L7LRE7 A0A0N1IAU4 + More
A0A0N1PJ75 A0A437BPU9

PDB

5CM2 E-value=7.68598e-19, Score=236

KEGG

101742142 no KO assigned | (RefSeq) protein piccolo

GO

GO:0016300 GO:0002098 GO:0008152 GO:0008168 GO:0006265 GO:0003917 GO:0016887 GO:0005634 GO:0030145 GO:0006412 GO:0016876 GO:0043039

Length:

1473

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00122

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00007

outside

1 - 1473

Pi

235.092968

Theta

163.174737

Tajima's D

1.239387

CLR

0.502862

CSRT

0.720413979301035

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics