SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08242
Annotation
predicted_protein_[Nematostella_vectensis]
Location in the cell
Nuclear   Reliability : 3.132
 

Sequence

CDS
ATGGAAGGAGACACCCGAGGTCAAGGGTCGGAATTCAGAGCTGCCCGAGGTCAAGGGTCGGAGTTCGAAGTCGCCCGAGGTCAAGGGCTGGAATTAGAAGCCGCCCGAGGTCGAGGGTCGGAATTAGAAGTTGCCCGAGGTCAAGGGTCGGAATTAGAAGTTGCCCGAGGTCAAGGGCCAGAATTCGGAGTTACCCGAGGTCAAGGGTCGGAATTCGGAGTCACCCGAGGTCAAGGGTCTGAATTCGGAGTTGCCCGAGGTCAAGGGTTGGAAGTTGAATTTGCCCGAGGTCAAGGGTCAGAATTCGGATTTTCCCGAAGTCAAAGGTCGGGATTTGGTAATGCCCAAGGTAAGGATTCGGAATTTGACGATGTCCAAGGTCAGGGATTGGAAACCGGAAATACTCGAGGTCGAGGGTACGAAGTCTATAATGCCCGAGGTACAGAGCCTGAAATCGATTACGAACGACTGCAAGGACTAAGAGACAATGACATAATATATCGTGGGATTACTAATGGCGTAGTGCGAACGCGTGAACCGAGACGTGGAAACGAGTCGTATGGTGCGAAGAAGTCCCGGCGGAGACAGCGATTGGAGGGGAGGTCGGAGTCCAAGGAATCTGAAGAGGACTTTATATGGCGGAATCAGAGTAAAAGGAGGCGGTCTCCAAACCGACGAATTAGACGTAAAGGTACATATAAAGTACTCTAA
Protein
MEGDTRGQGSEFRAARGQGSEFEVARGQGLELEAARGRGSELEVARGQGSELEVARGQGPEFGVTRGQGSEFGVTRGQGSEFGVARGQGLEVEFARGQGSEFGFSRSQRSGFGNAQGKDSEFDDVQGQGLETGNTRGRGYEVYNARGTEPEIDYERLQGLRDNDIIYRGITNGVVRTREPRRGNESYGAKKSRRRQRLEGRSESKESEEDFIWRNQSKRRRSPNRRIRRKGTYKVL

Summary

Pfam
PF02008   zf-CXXC
Interpro
IPR040388   CXXC4/CXXC5        + More
IPR002857   Znf_CXXC       

Ontologies

Topology

Length:
236
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.08513
outside
1  -  236
 
 

Population Genetic Test Statistics

Pi
370.655314
Theta
220.745371
Tajima's D
2.060141
CLR
0.000357
CSRT
0.893405329733513
Interpretation
Uncertain
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