SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08240
Pre Gene Modal
BGIBMGA009453
Annotation
PREDICTED:_AN1-type_zinc_finger_protein_2A-like_[Papilio_polytes]
Location in the cell
Extracellular   Reliability : 2.348 Nuclear   Reliability : 2.178
 

Sequence

CDS
ATGGAATTTCCTCATCTTGGAAAAAATTGTTCTTATGAATCTTGCAATAAACTGGATTTCTTGCCGATGAAATGTGGTGCTTGTCGTGAAGTGTTCTGCGCCGATCATTTTGCTTATGCGAAACACGAGTGCCCCGAGCCGAACGTACGTGACGTGCAAGTGCCAGTGTGTCCGCTGTGCGGGGCTCCAGTGCCGGGTCGGAGGGGTCAACCACCAGACCTGGCAGTTGGGGCTCACATAGATAACCAGTGTACATCTGATCCTGCAGTAGAGAGACGCAAGAAGGTGTTCACGAACCGTTGTTCATACAAGAGCTGCAAAAGGAAGGAGATGGTGCCGCTGGTATGTTCTGAATGCGCACTCAACTTCTGTCTAAGGCACAGACACACGGCCGACCACTTGTGCGAAGGGAAACTTGCCGCCAAGAGGAGACAAGCCGCTAAGGCTGCCATGGCCCGGATGAGACAAAACGAAAGTCTATGGATCCGGAACGAGGCCCCGCTGCCCTCCGCTGTCAGCAGCTTCTCTGAGGTCCAGGGGAACATGACAGAAGACGAGGCGTTGGCTCACGCGCTGGCGTTGTCGATGCAGGAGAACGTGAACATAGAGTCCGGCGACACCAGCCTCGCGCGCGCCCTCACCCGCCAGCGCGTCGGCGGCGACCAGCCCGCCCGCTGCACCGTGTCCTAA
Protein
MEFPHLGKNCSYESCNKLDFLPMKCGACREVFCADHFAYAKHECPEPNVRDVQVPVCPLCGAPVPGRRGQPPDLAVGAHIDNQCTSDPAVERRKKVFTNRCSYKSCKRKEMVPLVCSECALNFCLRHRHTADHLCEGKLAAKRRQAAKAAMARMRQNESLWIRNEAPLPSAVSSFSEVQGNMTEDEALAHALALSMQENVNIESGDTSLARALTRQRVGGDQPARCTVS

Summary

EMBL
BABH01023139    KQ458751    KPJ05320.1    RSAL01000021    RVE52403.1    KZ149927    + More
PZC77527.1    NWSH01000813    PCG74084.1    AGBW02012702    OWR44584.1    GDQN01008790    GDQN01008107    JAT82264.1    JAT82947.1    GAIX01012193    JAA80367.1    GDQN01008121    JAT82933.1    GEZM01084997    GEZM01084996    JAV60329.1    GEDC01027896    JAS09402.1    KQ971338    EFA02191.1    GECU01034735    JAS72971.1    ATLV01012143    KE524764    KFB36213.1    APGK01039000    KB740966    KB632186    ENN76930.1    ERL89700.1    GDHF01006501    JAI45813.1    GAKP01005302    JAC53650.1    AXCN02000047    CH933807    EDW11460.1    GBXI01015307    JAC98984.1    ADMH02001603    ETN61874.1    GGFJ01008802    MBW57943.1    AXCM01003145    GAMC01000929    JAC05627.1    GFDL01013166    JAV21879.1    HQ384023    ADQ64516.1    GFDG01001279    JAV17520.1    APCN01000459    GDIP01125362    JAL78352.1    GL449694    EFN82209.1    GDIP01149607    LRGB01002101    JAJ73795.1    KZS09182.1    GDIQ01088466    JAN06271.1    GBHO01034775    GBHO01034773    GBRD01000224    GDHC01018026    GDHC01004997    GDHC01001532    JAG08829.1    JAG08831.1    JAG65597.1    JAQ00603.1    JAQ13632.1    JAQ17097.1    GGFK01011224    MBW44545.1    CH963920    EDW78167.1    GGFK01011384    MBW44705.1    AAAB01008859    EAA07461.4    GFDG01001276    JAV17523.1    JRES01001272    KNC24038.1    OUUW01000004    SPP79837.1    GFDL01012835    JAV22210.1    JXUM01013055    KQ560367    KXJ82782.1    AE014134    BT030995    AAF51108.3    ABV82377.1    GAPW01003876    JAC09722.1    CH940649    EDW64785.1    ABJB010600558    ABJB011069411    DS921183    EEC17249.1    CH676463    EDW44610.1    CM000157    EDW87537.1    CM000361    CM002910    EDX03614.1    KMY87891.1    GDIP01098811    JAM04904.1    GBGD01002820    JAC86069.1    GDKW01002544    JAI54051.1    GBYB01010614    JAG80381.1    GEFM01004801    JAP70995.1    CH916368    EDW04048.1    LBMM01006587    KMQ90488.1    GADI01006805    JAA67003.1    KQ414670    KOC64291.1    CH477623    EAT38145.1    KQ977791    KYM99692.1    GANO01003443    JAB56428.1    AJWK01031750    KK120106    KFM77539.1    GECL01000156    JAP05968.1    CH954177    EDV57620.1    KQ976396    KYM93014.1    EAAA01001392    GDAI01001830    JAI15773.1    NNAY01002666    OXU20822.1    KK107364    QOIP01000007    EZA51947.1    RLU20917.1    BC122499    CM004483    AAI22500.1    OCT60986.1    CH478337    EAT33207.1   
Pfam
PF01428   zf-AN1        + More
PF02809   UIM
Interpro
IPR000058   Znf_AN1        + More
IPR003903   UIM_dom       
IPR035896   AN1-like_Znf       
SUPFAM
SSF118310   SSF118310       
Gene 3D
PDB
1X4V     E-value=2.59745e-07,     Score=128

Ontologies

Topology

Length:
229
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02655
outside
1  -  229
 
 

Population Genetic Test Statistics

Pi
244.688745
Theta
204.691573
Tajima's D
0.91607
CLR
0.225134
CSRT
0.634068296585171
Interpretation
Uncertain
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