Gene

KWMTBOMO08239

Pre Gene Modal

BGIBMGA009514

Annotation

hypothetical_protein_KGM_02142_[Danaus_plexippus]

Location

Bomo_Chr14(+):2484744-2497068      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.23 PlasmaMembrane   Reliability : 1.354

CDS

ATGGTGCACGATGTTATTTTACTTCAAGTACCGCTTCCAAAACTCGAAGAATTACAGAAGACGATTTTTTCTAGTGAAGTCCTCGAATTTATTGCAGCCCTACATCGTAATTTTGACAAAAAAATAGAATTGTTGTATGAGAATAGAAAACGACGAGCTGTGGAAATAAAAAATGATCCTTTTATTGATTTCAAAAATTCTCCCGAACGAAGAGACAAAAGCTGGAAAATAGCGCCTTTGCCTATTAGATTGCAAAACAGACATTTAGATCTTGGTGATGTGTCAGCTTCAAATACGGCTCATTTCGTAGTAGCTCTCAATGAGGATGTTCAAGGGATCCAAGTAGATTTTGATGACGGTCACTGTCCAACATGGAGGAACCAACTTCTCGCTTTCAACAACATAAATTTGGCTGTGAACGGTAAACTACAAGGTGCACCGTTGACGATAACTACCTGCCCCGTATTGATGTTTAGACCCCGCGCGTGGAACATGATTGAACACAACATACTTGTCGACGGTAAGGAAGCTATTGGTCCATTAGTTGACTTCGCTGTCCTCATGTACCACAACGCACGGAAGCTTTACGAGGCGAACAGCGGACCATATTTCTACTTGTCCAAATTAGAAAGCGCGTCTGAAGCTCAACTATGGAACGAGATCTTCGTTTGGGCCCAGAAAGAGTTCAAATTGCCCCAAGGAACCATAAAAGCTTGTGTATTGATAGAAAATATATTTTCGGTGTTCGAACTGGAAGAAATATTGTATGCTCTGAGGGACCATTCTCTGGGATTGAACTGTGGTATATGGGATTACTGCGCTTCCATCATTGCTAAGTTTGGTAGCCGCAGCGAGTATCAGTTGCCCGACCGGAGCAAATACGTGAATATGGACCGCCACTTCTTGATCTCTTACTTGAGATTAGTCGTCAGCACTTGTCATGCTAGAGGAGCACACGCAACCGGAGGAATGGCCGCGTCTATTTTGAAACCTGGCTCCGATGGAACTGATGATGAATCCAAGGCAATCATAAGTGAGATATTGGAAATGAAACTGAAGGAAATAGACTGCGGCGTCGACGGTTTCATGGTGTACGACGCGCGTACTGTCCCGCATGTCAACGAGCTATGGAAGAAAAACGGTACAATGCCAAATCAAATTCATCGCAAATTCGACTGTAATGTTACACCACACGATTTACTTTCCATACCGTCCGGCGGCGTCACTATGGAAGGCTTACAAAACAACATTGCTATATCGATCCTGTTCGTGTATTACTGGCTGGCCGGAGTCGGGCATTTCTTCTACAACGGCAAAATCGAAGATTCTGCGACCGCGGAGATATCCAGATATCAGATATGGCAATGGATTCGATTTTCGGCCGCGTTGGAGGGCGCGTCTGGAGAGCGCGTGACGTCACGGCTGGTGGAGGACCGGGCGTCCGATTTCGTGGGGCGCGCGCACCGGCGGCTGTGTCGCTCCGGCGCCGAGCGCAAGCGGCTCACGGCGGCGCGCTACATGAGCCTCGAGCTGGTGCTGTCCCGGGACCCGCCAGAGTTCATCACGAGCTACCTCAACGACAACCACAAGTTCAGAACTCTGCACAATAAGGCCCTGCTGAGCAGTTTGTGA

Protein

MVHDVILLQVPLPKLEELQKTIFSSEVLEFIAALHRNFDKKIELLYENRKRRAVEIKNDPFIDFKNSPERRDKSWKIAPLPIRLQNRHLDLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLAVNGKLQGAPLTITTCPVLMFRPRAWNMIEHNILVDGKEAIGPLVDFAVLMYHNARKLYEANSGPYFYLSKLESASEAQLWNEIFVWAQKEFKLPQGTIKACVLIENIFSVFELEEILYALRDHSLGLNCGIWDYCASIIAKFGSRSEYQLPDRSKYVNMDRHFLISYLRLVVSTCHARGAHATGGMAASILKPGSDGTDDESKAIISEILEMKLKEIDCGVDGFMVYDARTVPHVNELWKKNGTMPNQIHRKFDCNVTPHDLLSIPSGGVTMEGLQNNIAISILFVYYWLAGVGHFFYNGKIEDSATAEISRYQIWQWIRFSAALEGASGERVTSRLVEDRASDFVGRAHRRLCRSGAERKRLTAARYMSLELVLSRDPPEFITSYLNDNHKFRTLHNKALLSSL

Uniprot

H9JJ13   A0A212ERQ0   A0A2A4JPU2   A0A0N1PGF2   A0A2W1BV37   A0A3S2P4V2   + More
A0A0N1PK80   W5JIQ2   A0A182R2K5   A0A2M4BJC3   A0A2M4BJH3   A0A2M4A9E0   A0A2M4A9P5   A0A084W163   A0A182JM52   Q7Q7F4   A0A182WAK8   A0A182KW17   A0A182TUT4   A0A453Z224   A0A2M4BJT8   A0A2Y9D0I8   A0A2M4A8S2   A0A182PGE7   A0A2M3Z0S5   A0A453YJW6   A0A2M3Z0F9   A0A182QWW6   A0A182K8Y7   A0A1Q3FIH9   U5EYD5   A0A0N7ZB81   A0A0P4W6J7   A0A0P4WI16   B0VZ37   A0A2M3Z0I8   A0A1S4F3P9   Q0IG61   A0A182GLL6   M4A914   A0A146NAB6   A0A182GE89   A0A1Y1KJA7   A0A087XHM0   V9KGI5   A0A2I4D8S4   A0A3Q1K0H9   A0A3Q3EJ74   A0A3Q2ZH47   A0A3Q2ZUM4   A0A336LKB6   A0A2U9C9W3   A0A3Q1B5V6   A0A182XD31   F7G2J2   A0A146NTX5   A0A1S3H4N3   A0A3P8X909   R7UVY7   A0A3B4X2K6   G3Q7Q4   A0A1L8HLV4   A0A3Q3KPS3   G3VNW1   B0BMB1   A0A3B4T5C6   A0A401PXG3   G3Q7Q6   A0A3P8ZDW8   K7IWQ9   A0A3Q0SDT0   A0A3Q3GDT5   A0A1S3IXG7   Q4T6G9   A0A1S3H7J3   A0A3B5BD87   A0A3Q3GII6   A0A182N7X1   W5UDP0   A0A2D0RGJ7   A0A1L8HUR1   A0A060XNA5   A0A3P9CMC8   A0A3P8RWS3   A0A210QCZ6   A0A3P9CMH6   E9GXP8   A0A3Q2UVI6   A0A0R4IAX5   A0A3B4GN28   K7E3W6   A0A1S3STY4   H2N251   A0A1S3STZ4   I3K098   A0A3Q2UVG1   W5MX10   A0A3P9KGL9   A0A3P8NXX0  

Pubmed

19121390    22118469    26354079    28756777    20920257    23761445    + More
24438588    12364791    14747013    17210077    20966253    17510324    26483478    23542700    28004739    24402279    18464734    25069045    23254933    27762356    21709235    20431018    30297745    20075255    26383154    15496914    23127152    24755649    25186727    28812685    21292972    23594743    17495919    17554307   

EMBL

BABH01023137    BABH01023138    BABH01023139    AGBW02012961    OWR44155.1    NWSH01000813    + More
PCG74085.1    KQ458751    KPJ05321.1    KZ149927    PZC77525.1    RSAL01000021    RVE52402.1    KQ459986    KPJ18853.1    ADMH02001057    ETN64262.1    GGFJ01004014    MBW53155.1    GGFJ01004013    MBW53154.1    GGFK01003917    MBW37238.1    GGFK01004129    MBW37450.1    ATLV01019211    KE525264    KFB43957.1    AAAB01008960    EAA11391.4    GGFJ01004151    MBW53292.1    GGFK01003844    MBW37165.1    GGFM01001330    MBW22081.1    APCN01004429    GGFM01001254    MBW22005.1    AXCN02000905    GFDL01007762    JAV27283.1    GANO01002067    JAB57804.1    GDRN01088111    JAI60912.1    GDRN01088110    JAI60913.1    GDRN01088109    JAI60914.1    DS231813    EDS25628.1    GGFM01001282    MBW22033.1    CH477261    EAT45696.1    JXUM01013759    KQ560384    KXJ82678.1    GCES01157980    JAQ28342.1    JXUM01010147    KQ560300    KXJ83170.1    GEZM01084996    JAV60330.1    AYCK01017264    JW864513    AFO97030.1    UFQT01000040    SSX18644.1    CP026255    AWP12546.1    GCES01151425    JAQ34897.1    AMQN01006845    AMQN01006846    AMQN01006847    KB299334    ELU08087.1    CM004467    OCT97067.1    AEFK01216000    AAMC01007841    AAMC01007842    BC158354    AAI58355.1    BFAA01010334    GCB77844.1    AAZX01000616    CAAE01008763    CAF91513.1    JT406937    AHH37787.1    CM004466    OCT99787.1    FR905365    CDQ78744.1    NEDP02004118    OWF46599.1    GL732573    EFX75699.1    AL929007    AERX01033465    AERX01033466    AHAT01001305   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000283053    UP000053240    + More
UP000000673    UP000075900    UP000030765    UP000075880    UP000007062    UP000075920    UP000075882    UP000075902    UP000075903    UP000069272    UP000075885    UP000075840    UP000075886    UP000075881    UP000002320    UP000008820    UP000069940    UP000249989    UP000002852    UP000028760    UP000192220    UP000265040    UP000264800    UP000246464    UP000257160    UP000076407    UP000002279    UP000085678    UP000265140    UP000014760    UP000261360    UP000007635    UP000186698    UP000261640    UP000007648    UP000008143    UP000261420    UP000288216    UP000002358    UP000261340    UP000261660    UP000007303    UP000261400    UP000075884    UP000221080    UP000193380    UP000265160    UP000265080    UP000242188    UP000000305    UP000264840    UP000000437    UP000261460    UP000002280    UP000087266    UP000001038    UP000005207    UP000018468    UP000265180    UP000265100   

PRIDE

H9JJ13   

Pfam

PF01274   Malate_synthase        + More
PF12530   DUF3730
PF11229   Focadhesin

Interpro

IPR006252   Malate_synthA        + More
IPR011076   Malate_synth-like_sf       
IPR001465   Malate_synthase       
IPR016024   ARM-type_fold       
IPR022542   DUF3730       
IPR021392   Focadhesin       

SUPFAM

SSF51645   SSF51645        + More
SSF48371   SSF48371       

CDD

cd00727  malate_synt_A

ProteinModelPortal

H9JJ13   A0A212ERQ0   A0A2A4JPU2   A0A0N1PGF2   A0A2W1BV37   A0A3S2P4V2   + More
A0A0N1PK80   W5JIQ2   A0A182R2K5   A0A2M4BJC3   A0A2M4BJH3   A0A2M4A9E0   A0A2M4A9P5   A0A084W163   A0A182JM52   Q7Q7F4   A0A182WAK8   A0A182KW17   A0A182TUT4   A0A453Z224   A0A2M4BJT8   A0A2Y9D0I8   A0A2M4A8S2   A0A182PGE7   A0A2M3Z0S5   A0A453YJW6   A0A2M3Z0F9   A0A182QWW6   A0A182K8Y7   A0A1Q3FIH9   U5EYD5   A0A0N7ZB81   A0A0P4W6J7   A0A0P4WI16   B0VZ37   A0A2M3Z0I8   A0A1S4F3P9   Q0IG61   A0A182GLL6   M4A914   A0A146NAB6   A0A182GE89   A0A1Y1KJA7   A0A087XHM0   V9KGI5   A0A2I4D8S4   A0A3Q1K0H9   A0A3Q3EJ74   A0A3Q2ZH47   A0A3Q2ZUM4   A0A336LKB6   A0A2U9C9W3   A0A3Q1B5V6   A0A182XD31   F7G2J2   A0A146NTX5   A0A1S3H4N3   A0A3P8X909   R7UVY7   A0A3B4X2K6   G3Q7Q4   A0A1L8HLV4   A0A3Q3KPS3   G3VNW1   B0BMB1   A0A3B4T5C6   A0A401PXG3   G3Q7Q6   A0A3P8ZDW8   K7IWQ9   A0A3Q0SDT0   A0A3Q3GDT5   A0A1S3IXG7   Q4T6G9   A0A1S3H7J3   A0A3B5BD87   A0A3Q3GII6   A0A182N7X1   W5UDP0   A0A2D0RGJ7   A0A1L8HUR1   A0A060XNA5   A0A3P9CMC8   A0A3P8RWS3   A0A210QCZ6   A0A3P9CMH6   E9GXP8   A0A3Q2UVI6   A0A0R4IAX5   A0A3B4GN28   K7E3W6   A0A1S3STY4   H2N251   A0A1S3STZ4   I3K098   A0A3Q2UVG1   W5MX10   A0A3P9KGL9   A0A3P8NXX0  

PDB

3CUX     E-value=4.12879e-86,     Score=812

KEGG

101735633    no KO assigned | (RefSeq) malate synthase, glyoxysomal-like

GO

GO:0006097   GO:0004474   GO:0005737   GO:0003824   GO:0016491   GO:0016705   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR42902  

Length:

543

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

12.23614

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00607

outside

1  -  543

 

 

Pi

164.170864

Theta

139.418932

Tajima's D

0.880175

CLR

0.00652

CSRT

0.624718764061797

Interpretation

Uncertain