SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08235
Annotation
PREDICTED:_uncharacterized_protein_LOC100486501_isoform_X3_[Xenopus_tropicalis]
Location in the cell
Nuclear   Reliability : 1.733
 

Sequence

CDS
ATGTTCTCCGACTTAAGATCACCTGACATTCAAAGAGCAGTAACACCTAATATCCAAATAGCACCATCTATCCAAAGAGCAACGACACCCGATGTTCAAACAACATTATCATCATTTAATCAAAGAGCAGTTACACTTGATGCTCAGATAGCTCCAATGCCACTTTTACAAAAAGTAGTGGCAGTGGACGATCAGATAGACTCGACGTCATCTGTACACAGAGCGGCGGCACCTGACGCTCATATAGAATTATCACAATCTATACTAAAAATAGTGACACCTGAAGCTCAGATAGCACCGATGGTACCTGTAATTGAAATGGTGCCTCCTGATGGTCTGATACCATCGTCACCATCTTTGCAAAGGGCAGTACCACCTGAAGCGCAGATCGTTCGGCGCAAATTCTTAACCGTTCCAGCTTTACCAGTATCCAATACATTAACTCCTAACTCCTAA
Protein
MFSDLRSPDIQRAVTPNIQIAPSIQRATTPDVQTTLSSFNQRAVTLDAQIAPMPLLQKVVAVDDQIDSTSSVHRAAAPDAHIELSQSILKIVTPEAQIAPMVPVIEMVPPDGLIPSSPSLQRAVPPEAQIVRRKFLTVPALPVSNTLTPNS

Summary

Interpro
IPR032675   LRR_dom_sf        + More
IPR026075   SPRR/LCE       
Gene 3D

Ontologies

Topology

Length:
151
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00027
Exp number, first 60 AAs:
0
Total prob of N-in:
0.05167
outside
1  -  151
 
 

Population Genetic Test Statistics

Pi
169.017013
Theta
182.842104
Tajima's D
-0.237914
CLR
0
CSRT
0.304834758262087
Interpretation
Uncertain
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