SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08228
Pre Gene Modal
BGIBMGA014572
Annotation
PREDICTED:_GDP-Man:Man(3)GlcNAc(2)-PP-Dol_alpha-1?2-mannosyltransferase_[Papilio_polytes]
Location in the cell
Mitochondrial   Reliability : 1.486 PlasmaMembrane   Reliability : 1.697
 

Sequence

CDS
ATGAGAATTAAAGAACGGAAACTGGAGAGATTGAAACAACATGGACCAAACGTGGCATTCTTCCATCCCTACTGTAATGCTGGAGGTGGGGGTGAAAGAGTACTGTGGGTGGCCATCAAAGCTGTCCTAACCAGGTATCCAGATTCAAATATTTTCATCTATACAGTGGAAACAGAAGAACCTCAAAAAATACTAGATAAAGCACAGAATCACTTCAATGTGAAATTGGACTTGAAGAAGATAACATTTGTACATCTTACTTTGAAAATCTTGATTGAAGCAAAAACATACCCATACTTTACCTTAGTGCTCCAAAGCCTTGGATCTATGGTGCTCGGAATGGAAGCATTTTTGAAACTAAATCCTGATGTTTACATAGACACGATGGGATGTGCCTTCACGTTCCCAATATTCCGTTATTTGGCTCAGTCCAGGGTCGGATGTTACGTCCATTATCCCACCATAACGACAGCAATGATGCGCAGGGTCAAACACAGGATAGTTTCATACAACAATTCTGGTATAATTGCCAGGAATCCTTTGTACACTTGGATAAAGTTGCTGTATTATAAGATATTTGGTTGGTTATACGGTATTGTGGGTCGGTGTGCAGACGTTATAATGGTAAATGGAACTTGGACAGAGGAACATATCAATGAACTTTGGAAGGAACCTTACAACACTTACAAAGTCTTCCCACCTTGTGAGGTTACAGAATTGAAACAATTACGTTCTTTAGTGAAAGAGTCAGATCCTATCCGGATCCTGTCGGTCGCCCAGTTCAGACCGGAGAAAGATCATCCGCTGATGCTGCAGGCGATGTACGAGCTGAGGAGCCTGTTGACCAAGAATGAATTCCTTTGGAATAAGATCCAGTTGGTTCTGGCGGGTTCCTGCCGCAATGCCGAAGACGAGGAGCGCGTGAGACACCTCAAGGACCTGGCCAAGCACTTGTCCTTAGAAAACAACGTGCAGTTTGAGGTGAACGTGACGTACGCTCGACTCTTGCACCTTTACCAGACCAGCCTCATCGGTCTTCACGCCATGTGGAATGAGCACTTCGGAATCAGCGTGGTGGAGAGCATGGCGGCGGGGCTGGTGACGGTGGCGCACCGCTCGGGCGGGCCGCGCGCCGACATCGTGGCGCCGCACGCCGGCTACCTGGCCGCCGAGCCCGAGCAGTACGCCGCCGCGCTGCTGCACGCGCTGTCGCTGTCCGCCGCCAGCCGCGCCGACCTCGTGGCCGCCGCGCGTGCATCCGTGGATCGTTTCTCGGTGAAGGAGTTTGAGAAATCATTCCTTCGAGCGTGCGAACCGTTAATGTCTTTCTAG
Protein
MRIKERKLERLKQHGPNVAFFHPYCNAGGGGERVLWVAIKAVLTRYPDSNIFIYTVETEEPQKILDKAQNHFNVKLDLKKITFVHLTLKILIEAKTYPYFTLVLQSLGSMVLGMEAFLKLNPDVYIDTMGCAFTFPIFRYLAQSRVGCYVHYPTITTAMMRRVKHRIVSYNNSGIIARNPLYTWIKLLYYKIFGWLYGIVGRCADVIMVNGTWTEEHINELWKEPYNTYKVFPPCEVTELKQLRSLVKESDPIRILSVAQFRPEKDHPLMLQAMYELRSLLTKNEFLWNKIQLVLAGSCRNAEDEERVRHLKDLAKHLSLENNVQFEVNVTYARLLHLYQTSLIGLHAMWNEHFGISVVESMAAGLVTVAHRSGGPRADIVAPHAGYLAAEPEQYAAALLHALSLSAASRADLVAAARASVDRFSVKEFEKSFLRACEPLMSF

Summary

EMBL
ODYU01003815    SOQ43042.1    KQ459585    KPI98293.1    KZ150088    PZC73739.1    + More
AGBW02014627    OWR41308.1    CH477195    EAT48413.1    GAPW01001174    JAC12424.1    JXUM01092006    JXUM01092007    JXUM01092008    JXUM01092009    KQ563958    KXJ73015.1    GFDL01008765    JAV26280.1    DS232723    EDS45158.1    AXCM01004177    AAAB01008816    EAA05076.3    APCN01004494    AXCN02001111    GANO01001852    JAB58019.1    CM000159    EDW94993.2    CH891692    EDW99658.2    CH480826    EDW44395.1    CM002912    KMZ01060.1    CH954178    EDV52686.1    ATLV01015404    KE525013    KFB40404.1    GDAI01000067    JAI17536.1    UFQS01000020    UFQT01000020    SSW97489.1    SSX17875.1    CH902618    KPU78794.1    AE014296    AY061012    AY113436    AAF51756.2    AAL28560.1    AAM29441.1    GGFJ01004818    MBW53959.1    GFDF01000791    JAV13293.1    GFDF01000779    JAV13305.1    ADMH02000374    ETN66796.1    CH963876    EDW76816.2    GBXI01011799    JAD02493.1    GAKP01002012    JAC56940.1    GAMC01005640    JAC00916.1    OUUW01000012    SPP87365.1    GGFM01003303    MBW24054.1    GGFK01005244    MBW38565.1    CH379070    EAL29903.3    CH933809    KRG06812.1    CVRI01000006    CRK87969.1    EDW19767.2    CCAG010023454    EZ423525    ADD19801.1    JXJN01002295    CH916366    EDV98003.1    GL447645    EFN86236.1    JRES01000833    KNC27988.1    GL437593    EFN70279.1    KQ976870    KYN07783.1    ADTU01015732    GL888086    EGI67815.1    KQ976694    KYM77605.1    KQ982194    KYQ59096.1    KK852809    KDR16005.1    DS235271    EEB14247.1    NEVH01003505    PNF40509.1    KQ981208    KYN44850.1    KQ434856    KZC08728.1    KQ979763    KYN19205.1    KQ414614    KOC68857.1    CH940647    EDW70359.1    KQ760869    OAD58763.1    KZ288222    PBC32112.1    NNAY01002138    OXU21962.1    GBYB01004589    GBYB01009655    GBYB01009656    JAG74356.1    JAG79422.1    JAG79423.1    QOIP01000008    RLU19736.1    KQ435814    KOX72671.1    PYGN01000502    PSN45247.1    GFTR01006177    JAW10249.1    ACPB03004983    GAHY01002111    JAA75399.1    KQ971345    EFA05431.1    GBHO01001051    GBRD01006489    JAG42553.1    JAG59332.1    GDHC01019882    GDHC01001668    JAP98746.1    JAQ16961.1    GDIP01137541    GDIP01038932    GDIQ01034961    LRGB01000915    JAL66173.1    JAN59776.1    KZS15184.1    GDIP01040060    JAM63655.1   
Pfam
PF02194   PXA        + More
PF00534   Glycos_transf_1
PF15924   ALG11_N
Interpro
IPR038013   ALG11        + More
IPR003114   Phox_assoc       
IPR001296   Glyco_trans_1       
IPR031814   ALG11_N       
PDB
2F9F     E-value=0.0055571,     Score=94

Ontologies

Topology

Length:
443
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
23.69194
Exp number, first 60 AAs:
0.0354
Total prob of N-in:
0.54304
outside
1  -  443
 
 

Population Genetic Test Statistics

Pi
177.837303
Theta
137.103215
Tajima's D
0.920226
CLR
0.271684
CSRT
0.642417879106045
Interpretation
Uncertain
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