SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08227  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009504
Annotation
PREDICTED:_ubiquitin-fold_modifier_1_isoform_X2_[Papilio_polytes]
Full name
Ubiquitin-fold modifier 1      
Location in the cell
Cytoplasmic   Reliability : 1.632
 

Sequence

CDS
ATGGAAGAGACTGTACTGAGAGAACTTAGCGTGCCGGAAGCGACTCCATTCACTGCAGTGTTGAAGTTTGCAGCTGAAGAATTCAGGGTGGACCCTGCCACCAGTGCTATTATCACTGATGACGGTATCGGCATAAATCCTCAGCAGACAGCCGGTAATGTATTCCTGAAGCACGGTTCAGAATTAAGATTGATCCCAAGGGACCGTGTCGGCTTCTCTCTCATTTAA
Protein
MEETVLRELSVPEATPFTAVLKFAAEEFRVDPATSAIITDDGIGINPQQTAGNVFLKHGSELRLIPRDRVGFSLI

Summary

Description
Ubiquitin-like modifier.
Ubiquitin-like modifier protein which binds to a number of as yet unidentified target proteins.
Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post-translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
Similarity
Belongs to the UFM1 family.
Keywords
Complete proteome   Isopeptide bond   Reference proteome   Ubl conjugation pathway  
Feature
chain  Ubiquitin-fold modifier 1
propeptide  Removed in mature form
EMBL
BABH01023106    KQ459585    KPI98294.1    ODYU01003815    SOQ43043.1    KQ976717    + More
KYM76776.1    KQ979608    KYN20502.1    KQ982685    KYQ52339.1    KQ977085    KYN05873.1    GGFK01007449    MBW40770.1    AK401735    BAM18357.1    GDIP01246182    JAI77219.1    GGFM01004430    MBW25181.1    GL887513    EGI70940.1    GGFJ01011158    MBW60299.1    LJIJ01001092    ODM93042.1    HM449934    ADO33069.1    KZ150088    PZC73738.1    GAMD01002638    JAA98952.1    GL732720    EFX65997.1    GAIX01006645    JAA85915.1    LRGB01002140    KZS08953.1    KQ460889    KPJ11057.1    JXUM01116349    GAPW01006668    KQ565975    JAC06930.1    KXJ70477.1    CH477382    GALA01000415    JAA94437.1    KQ971338    EFA01851.1    ADMH02000405    ETN66680.1    KQ981965    KYN31887.1    REGN01010567    REGN01007745    RMZ98773.1    RNA05379.1    ADTU01023789    ATLV01019999    KE525289    KFB44764.1    GAPW01006667    JAC06931.1    AAAB01008987    APCN01000856    BT077390    BT078215    BT120925    BT121914    ACO11814.1    ADD24565.1    ADD38844.1    MH366259    QBB02068.1    JR037581    AEY57855.1    GDAI01000505    JAI17098.1    KK107182    EZA56006.1    APGK01045407    KB741035    ENN74719.1    KB632166    ERL89318.1    GANO01002365    JAB57506.1    PYGN01002066    PSN31619.1    DS985259    EDV20506.1    UFQT01000204    SSX21675.1    DS235842    EEB18267.1    EU142262    AXCN02000029    BT120621    ADD24261.1    BT080945    ACO15369.1    AJWK01008161    GFDF01004690    JAV09394.1    JO843338    AEO34955.1    GBZX01002908    JAG89832.1    GBBK01004469    JAC20013.1    GFDF01004649    JAV09435.1    CH916375    CVRI01000016    CRK90102.1    DS231967    UYRX01000806    VDK86368.1    AJVK01017261    GANP01003571    JAB80897.1    OIVN01004179    SPD15888.1    GFDG01000667    JAV18132.1    GBBL01002413    JAC24907.1    GEFM01001843    JAP73953.1    GADI01007313    JAA66495.1    ABJB010207539    DS660824    EEC03042.1    LHPG02000007    PRW57451.1    GFDL01009935    JAV25110.1    EZ048857    ACN69149.1    UXUI01009823    VDD94365.1    KI632147    EYU23906.1    GFPF01013143    MAA24289.1    KI632191    EYU22928.1    GACK01001510    JAA63524.1    KZ451929    PKA61505.1    NIVC01001610    NIVC01001406    PAA65860.1    PAA68291.1    GACK01001806    JAA63228.1   
Pfam
PF03671   Ufm1
Interpro
IPR029071   Ubiquitin-like_domsf        + More
IPR005375   UFM1       
SUPFAM
SSF54236   SSF54236       
PDB
5IA8     E-value=7.46396e-25,     Score=275

Ontologies

Topology

Length:
75
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00055
Exp number, first 60 AAs:
0.00055
Total prob of N-in:
0.17665
outside
1  -  75
 
 

Population Genetic Test Statistics

Pi
231.899637
Theta
194.565818
Tajima's D
0.598518
CLR
0.221128
CSRT
0.543522823858807
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27102218 SSASGIVESTIR 97.14 4e-20
28556443 ITLTSDPK 100.00 7e-15
28556443 EQSLYSLWAHEWTK 100.00 7e-15
26822097 FAAEEFR 96.43 2e-14
25044914 VDNFVDDIFR 96.43 2e-14
28556443 VDPATSAIITDDGIGINPQQTAGNVFLK 100.00 0.002
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