SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08226
Pre Gene Modal
BGIBMGA009459
Annotation
PREDICTED:_uncharacterized_protein_LOC101740850_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.811
 

Sequence

CDS
ATGATACAGAAAAGTTTTTTGGTTTGTAATAAAATAGAAACAAGGGATGTTTTCATAGACATCTGTACAATATTTGCTTTACATCTCAAGGAATATAAAAAAGCATTGAAACGCTTGGAAAAATCACCTTCAGAATCTATAGAAAGTTTCTACAAAAAAGCGCATGCAGTTTCTGACCCAATGAAAAACTTAACTAAGACTGATCATTGTACGAACCTGCTACGATTAATTATGAAAGAATTAGTACCATGGGAATTATGGGACACACCCCACTCAGAGCTCATTGTTCGTATACTGTCAAGGAAACTTGATAGCTTCATTGACAGCACCTTAGTAGATCCTATTTGGTTAAATGATAAATTGCTTGCTTATTTCAAAGTTGAAAATAAAGTGTTGCTTTCGGAAAAATCTGAGCCAATCTTGGAAAACATTCCGACACAAGAGGCAGATACAGAATGTACAAAAAAGAAAACTGAAGATGAATGTAAACCTGAAGAAAAGAAAGAACTTAAAGCAGTTCAAATACAGAAGAAAGACGAGACTATAAACAAGAAAGAGGAGTTGACCAGTGACCCAGTTGATTTGAAGAGTTCTCCGATATTAAGGCAACGAAGAGGTCGACAGGGCAGGAATGAGGTCAAAATATATGATAGAATTATTGAGGGCAGTGTCAAAACCTGGGAGACGGACATGGACTTGCAGTGTATCAGCCTTGGTCAAGATTTGCTGGCTAGCTTAGATGGTGAGATAACACTAAGCCGGCTTTGGGGACAGGACGGTAGCCCTAACCCGCCCAGGACCAATTCACCACAGCCGCTCTGGTTTGGGGAAGAAGACAATATAGATGTGGAACTAAGTACGACTCCACCGAAAGAAAGAAAAGAGCATAGCCCCAAGTCAGCGGACGCTTTGCTCAAGGACATCCAGAGCACCGTCAGCCAGGCCAAGACCAAGATCGGTGACCTCCAGGTCCGAGATAACTTAGACTACAAGCGCTCAGATGAAGCGGCAGGGATGATGGAAGGGCTACTGGACTTCGGGATAGCAGGTCTGAAGAAGGGACTCCGCTTTACTGGACTTAGTGATGACTCGCAGGACAAGTCTCCGTCCCATCAGAAATCTAAACAGAGTCCCGAGAAACTTGGAGATAAAATTCCGGCTGACTTCAAAGGCAGAGACGTTTCGGAGTGCAGAGAAGCCCCGCCATTTTCGCAGAACAAAGAGGACAACAGTTCAATGCCCGTGCTGTTGAAACAACACAGAGTGACGTCACAAGACAGTATGCCGAGCCTCCCCCGGCCACCTCCCGACTCCCCGGAGCCGCAGTACGAGGAGGTGGCTGACCTGTCCACCAGCATCGCCAAGTTGAGGAGTTTGCTCCAACAGCGGGAACAAACTCAGAGGGGAGAGGAAGTGTGGTGGGAGGGCGCGGAGGAGACCCGCGGGAGGACGCAGGCGCACCACTCCTCGCGCCCGGTGGACGCCGCCAACATTGCGGATGAATACGACATGAATTTAGACAGAAACTCATCCCCGGGACAGACTTCTAACAACATGCAGAGACTTGACAAGTTGTTCCAACGAACGGTGACGGGAGTGTTCAACTCTATAAAGACGGCGGTCGGGGCCGAGGGGGAGGCTCCTGTCGCGATGCGACCTCAACACGACTGGGTCTACGTCTGCACCTCGCTTGAGAACAGCGTGGGCGGCGCGGTGGCGCGGCTGGTGGGCGCGCGGAGAGCCTTCACGCACGTGGACGCGGCGCTGGACTCGCTGGAGCAGCTCGCCGTCGCCAAGCAGGAACAACTCGTGCCCGACGACTTTGAGGAGTGGTGTGTTGAGTGCGGTGCTGCGTGGAGCGCGGCAAGCGCGGCGACCGGCGCGGGGAGCCCCGCCGCCCCTCCCGCCTCCCCGCCCGCGCACCTCGCGCGCCGCCTCGCCGCCGTACTGGCCGCCGGTACTGTCCCAAAACCAGCCCGGGCTACTTTGTTGGGAGACCTGTTGTTAGGCCAATCTTTCTTTTTTTACCTTAGGATGGGTTCTAAGGTCTCAGTATAG
Protein
MIQKSFLVCNKIETRDVFIDICTIFALHLKEYKKALKRLEKSPSESIESFYKKAHAVSDPMKNLTKTDHCTNLLRLIMKELVPWELWDTPHSELIVRILSRKLDSFIDSTLVDPIWLNDKLLAYFKVENKVLLSEKSEPILENIPTQEADTECTKKKTEDECKPEEKKELKAVQIQKKDETINKKEELTSDPVDLKSSPILRQRRGRQGRNEVKIYDRIIEGSVKTWETDMDLQCISLGQDLLASLDGEITLSRLWGQDGSPNPPRTNSPQPLWFGEEDNIDVELSTTPPKERKEHSPKSADALLKDIQSTVSQAKTKIGDLQVRDNLDYKRSDEAAGMMEGLLDFGIAGLKKGLRFTGLSDDSQDKSPSHQKSKQSPEKLGDKIPADFKGRDVSECREAPPFSQNKEDNSSMPVLLKQHRVTSQDSMPSLPRPPPDSPEPQYEEVADLSTSIAKLRSLLQQREQTQRGEEVWWEGAEETRGRTQAHHSSRPVDAANIADEYDMNLDRNSSPGQTSNNMQRLDKLFQRTVTGVFNSIKTAVGAEGEAPVAMRPQHDWVYVCTSLENSVGGAVARLVGARRAFTHVDAALDSLEQLAVAKQEQLVPDDFEEWCVECGAAWSAASAATGAGSPAAPPASPPAHLARRLAAVLAAGTVPKPARATLLGDLLLGQSFFFYLRMGSKVSV

Summary

Pfam
PF02194   PXA        + More
PF00534   Glycos_transf_1
PF15924   ALG11_N
Interpro
IPR038013   ALG11        + More
IPR003114   Phox_assoc       
IPR001296   Glyco_trans_1       
IPR031814   ALG11_N       

Ontologies

Topology

Length:
685
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.19198
Exp number, first 60 AAs:
0.0238
Total prob of N-in:
0.00141
outside
1  -  685
 
 

Population Genetic Test Statistics

Pi
236.74813
Theta
156.445933
Tajima's D
1.759114
CLR
0.047149
CSRT
0.842357882105895
Interpretation
Uncertain
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