Gene

KWMTBOMO08220

Pre Gene Modal

BGIBMGA009461

Annotation

TRAF3_[Bombyx_mori]

Location

Bomo_Chr14(-):2129462-2143946      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.966

CDS

ATGAGTTTAAATAGGATTATCGCAAATGGAGTCGGCGCGTCGGGAAATAAGAAGAATCCTAACGAAAGTCCCTGCTACTTCTGTAATGAACTCTTCGAAATGGGTCAGCTGCAGAATCATTTGAAACAATGCGGCAGTATCCTGGAACAGTGTCCTCTGCGCTGTGGCGCGTGGATACAGAGGAAACACAAGGACACGCATGTCAGGGAATGCCCGCAAATGGAGAAGGCTCGCAACTCTACATCTCCGAGTCACGCCAGCATGCCAGCCCCTGCCCCACCTGTACCACCAGCCTCCGTCCACACCTGGTCTCCGAGATCTGTACCTCTGGAAGACTGCGTCTCGTACCTTGAGAAAGAAGTCGCTAACATCAAGCTAGTGATAACAGAAGAAAGTAGTCACCGCGACATCCAGTCTACAGAGATGGAGACGATTCGCTCTAAGTTAGTGCTGGTCGAGGAACGGACTCAGCATTTCCTGTCGACCCTGGTGTCTCTGAGAGCAGCCGTGGATGATGAGGCTAGTCGTTCCGCTAACTGGGCTGCACAGTTCAAACATGACTTAGCCAACGTCCAGATAGCTTTACAGGAGCTTCAAAGTCAACAGTTATCAACTGCGATGCGCTTGGAGAGCGCAGTCAGCAGTCTGGTCCACGAGCAGAACGAGAGGGAACTCCTCGAGCAGGCCCTCACGCAGCACGACAGCAGGATACGGGCCGTTTATAAGCTTGAGGATGTCATTGAATACTTGAAGCAAACAGTGGAAGAGGAGAGGGAACGCAACGCTGAAAATCGTGCGGCATTAGAGACGGAACTGCTGGAGGCGCGCAGGTCTTCGGAACAGCTGGCCCAGCTGTCCGCTTTGAGAAGCCAGCTGCAAAACAGTGGCCCGGATAGACCGAGTATAGATCGGCTGGCAGTGTTAGAAGTGGCCACAGCCGATGCCAGGGCAGAGGCGGCGGAGCATGCAGCGAAGATGGACATCGTTTCCAGAGACCTCCGAGCGCTGACTAAATCCTACCACAAGCTGAGAACGGAACTAGCAGACTTCCAAGCAAAAATCAGTTTTAACCATCACGAGATGGGCAGTGATGACGGGCATTTCATTTGGAGAATCGAGAACTATACAGCGCGAATGAAAGACGCCAGAGAAAACGACACAGTTCTGAGTAGTCCTATATTCCGGACTCACAAATATGGATACACGCTTAAGGCGGAATTGAACCTTAATGGCATAGGGAAATGGAAGGGCCGCCACATCACCTGCACGGTGAGGCTGGTCGGAGGGCCGTACGATCCTCTGCTGGAGTGGCCCTGTGACCTCAACATCAACATCGTACTTAAAGACCAGCCTGCTAACAGAAAGCAGGCTATGGACATTGTCAAGTCCTTACAATTGCGTCGGAAGTCGTCATCGCAACGTCACGACTACGACCACGCAGACGAGGAGGCGAAGACCAAGTCGAACGAGGCGCTGGACAAATCGGTTCTTCAAATGAAGAGGCAGTACATATTCATACCACACGCCAGCTTAGACAAGTTCGATTACATCAAAAACGATGTTATGTTCCTTGAGTTTTTAGCCAATCAGTAA

Protein

MSLNRIIANGVGASGNKKNPNESPCYFCNELFEMGQLQNHLKQCGSILEQCPLRCGAWIQRKHKDTHVRECPQMEKARNSTSPSHASMPAPAPPVPPASVHTWSPRSVPLEDCVSYLEKEVANIKLVITEESSHRDIQSTEMETIRSKLVLVEERTQHFLSTLVSLRAAVDDEASRSANWAAQFKHDLANVQIALQELQSQQLSTAMRLESAVSSLVHEQNERELLEQALTQHDSRIRAVYKLEDVIEYLKQTVEEERERNAENRAALETELLEARRSSEQLAQLSALRSQLQNSGPDRPSIDRLAVLEVATADARAEAAEHAAKMDIVSRDLRALTKSYHKLRTELADFQAKISFNHHEMGSDDGHFIWRIENYTARMKDARENDTVLSSPIFRTHKYGYTLKAELNLNGIGKWKGRHITCTVRLVGGPYDPLLEWPCDLNINIVLKDQPANRKQAMDIVKSLQLRRKSSSQRHDYDHADEEAKTKSNEALDKSVLQMKRQYIFIPHASLDKFDYIKNDVMFLEFLANQ

Uniprot

E9JEJ2   A0A1E1WEW3   A0A2H1WBA0   A0A2A4JQ57   A0A212FGT7   A0A0N0PBK9   + More
A0A194PZ31   A0A3S2P7A1   A0A2W1BJ52   A0A0L7LT38   A0A1E1WLA4   A0A1E1VZ00   Q29GI2   A0A0R3P705   A0A3B0K3I4   B4L8S0   A0A0Q9XJC9  

Pubmed

19121390    21040523    22118469    26354079    28756777    26227816    + More
15632085    17994087    18057021   

EMBL

BABH01023089    BABH01023090    BABH01023091    GQ426309    ADM32535.1    GDQN01005663    + More
JAT85391.1    ODYU01007202    SOQ49774.1    NWSH01000919    PCG73540.1    AGBW02008595    OWR52956.1    KQ460889    KPJ11061.1    KQ459585    KPI98298.1    RSAL01000247    RVE43544.1    KZ150088    PZC73735.1    JTDY01000183    KOB78396.1    GDQN01007394    GDQN01005419    GDQN01003299    GDQN01001555    JAT83660.1    JAT85635.1    JAT87755.1    JAT89499.1    GDQN01011091    GDQN01008473    GDQN01006930    JAT79963.1    JAT82581.1    JAT84124.1    CH379064    EAL32127.1    KRT06950.1    OUUW01000015    SPP88764.1    CH933815    EDW08045.2    KRG07576.1    KRG07577.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000283053    + More
UP000037510    UP000001819    UP000268350    UP000009192   

PRIDE

E9JEJ2   

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR008974   TRAF-like       
IPR027130   TRAF5       
IPR002083   MATH/TRAF_dom       

SUPFAM

SSF49599   SSF49599       

Gene 3D

2.60.210.10     3.30.40.10    

ProteinModelPortal

E9JEJ2   A0A1E1WEW3   A0A2H1WBA0   A0A2A4JQ57   A0A212FGT7   A0A0N0PBK9   + More
A0A194PZ31   A0A3S2P7A1   A0A2W1BJ52   A0A0L7LT38   A0A1E1WLA4   A0A1E1VZ00   Q29GI2   A0A0R3P705   A0A3B0K3I4   B4L8S0   A0A0Q9XJC9  

PDB

3ZJB     E-value=6.36406e-13,     Score=181

KEGG

100862758    K03174 TNF receptor-associated factor 3 | (RefSeq) TRAF3

GO

GO:0046872   GO:1904504   GO:0005515   GO:0007186   GO:0016021   GO:0016491   GO:0016705   GO:0005634   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR10131:SF83  

Length:

530

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00163

outside

1  -  530

 

 

Pi

232.327134

Theta

190.428005

Tajima's D

0.989699

CLR

0.145405

CSRT

0.660016999150043

Interpretation

Uncertain